or62b5 (or125-3,LOC107703496,LOC107719020,LOC107573648)


Basic Information

Item Value
gene id or62b5
gene name or125-3,LOC107703496,LOC107719020,LOC107573648
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 5665360 ~ 5666286 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222072.1
ATGGATAATACCACACATTTTGTAACCTACACCTTGATGGAACCACAAGGCTCTAAAtcatatagacatatatatttcacgtgctttttctttatttatagtctaatattgtttttgaaCAGTTGCCTTTGCGTGATCATTGTTTTGGAGAGAGCACTTCATCAACCAATGTACATTTTTCTGTGCAATCTGTGTTTAAATGGAATATATGGAGCCAGTGGATTTTATCCTAAATTTCTACATGATTTAATACTGGATTCATATGTGATTCCTTCTTATATGTGTGCTTTTCAATCTTTTGTTATCTACAGTTcaattaaatgtgaatattcTACATTAGCAGTGATGGCATACGACAGACATGTAGCCATATGTCAACCTTTAGGCTATCACTCAAAGATGAACACATTTTCTTGCatcatgttcatttttgtttgttggacTGTACCATTAATTTCAACACTCATTGCTCTGATTCTATCAAATAAGTTGGTATTATGTAAAAATCACATTGATAAACTGTATTGTGACAATTGGTCAATGGTAAAGCTCTCATGTGAATCGACTGTCACTAATAACATTTATGGACTAAtaagcatttcatttcatttttgcattttcgcTGTAATTATTGTGTCCTATGTAAAACTTGCCATTGCATGTAAAGTATCGTTAGAGTGCAGACGAAAGTTTTGGCAGACATGTGTGCCTCATGTAGTTTCATTGATTAATTTCAGTGTTGCAATGCTTTTTGATACAATGTACAACAGATACGGCTCAAGCGATTTCCCAGACGACCTGCGTAATTTTTTGGCTTTAGAAATAATCATTGTGCCACCTCTTTTAGATCCTGTAATCTATGGCTTAAATTTGAAAGAAGTCCGCAAGAGAATCGtgaaattatgtataaatatcttaaagaaataa

Function

NR:

description
PREDICTED: olfactory receptor 5M3-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007608 sensory perception of smell biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004984 olfactory receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222072.1 True 927 mRNA 0.33 1 5665360 5666286

Neighbor

gene id symbol gene type direction distance location
or62b3 LOC107719021,LOC107703497,LOC107573649 coding upstream 2710 5661724 ~ 5662650 (+)
LOC122326971 or125-7,LOC107573644,LOC107719003,LOC107703451 coding upstream 12122 5652309 ~ 5653238 (+)
LOC122326807 LOC107742230,LOC107703498,LOC107573064,LOC107735684 coding upstream 18025 5646442 ~ 5647335 (+)
tgfb1b LOC107681095,LOC107706521,LOC107589304,LOC107703499,LOC107754964,LOC107573058 coding upstream 34051 5627008 ~ 5631309 (+)
b9d2 b9d2,LOC107589303,LOC107706523,LOC107681120,LOC107573061,LOC107703500 coding upstream 39320 5623883 ~ 5626040 (+)
LOC122326972 LOC107706424,LOC107681105,LOC107603271 coding downstream 3129 5669415 ~ 5670368 (+)
LOC122326973 or125-1,LOC107573645,LOC107719002,LOC107719001,LOC107703447,LOC107703448 coding downstream 6058 5672344 ~ 5674110 (+)
LOC122326974 or125-1,LOC107719002,LOC107573645,LOC107719001,LOC107703448,LOC107703447,LOC107573646 coding downstream 12784 5679070 ~ 5686068 (+)
LOC122326975 or125-1,LOC107719002,LOC107573645,LOC107703448,LOC107719001,LOC107703447 coding downstream 19912 5686198 ~ 5687139 (+)
LOC122326976 LOC107719001,LOC107703447,LOC107719002,LOC107573645,LOC107703448 coding downstream 28675 5694961 ~ 5695911 (+)
G144126 cbr1l,LOC107706524,LOC107573060,LOC107681174,LOC792137,LOC107589305 non-coding upstream 32509 5632041 ~ 5632851 (+)
G144081 LOC107708509 non-coding upstream 125896 5538200 ~ 5539464 (+)
G143990 LOC107589256,LOC107706512,LOC107681141,LOC107708519 non-coding upstream 290438 5366192 ~ 5374922 (+)
G144007 NA non-coding upstream 336955 5327230 ~ 5328405 (+)
G143937 NA non-coding upstream 513471 5151557 ~ 5151889 (+)
G144129 NA non-coding downstream 18542 5684828 ~ 5685097 (+)
G144130 NA non-coding downstream 39254 5705540 ~ 5706835 (+)
LOC122326140 NA non-coding downstream 126578 5792864 ~ 5794604 (+)
G144157 nkx6.1,nkx6-1,LOC107703597,LOC107700773,LOC107706438,LOC107722812 non-coding downstream 263483 5929769 ~ 5930885 (+)
G144212 NA non-coding downstream 396138 6062424 ~ 6062680 (+)
kcnk12l LOC107589263,LOC107708511,LOC107703554,LOC107591682,LOC107681176 other upstream 147424 5502033 ~ 5517936 (+)
G144077 NA other upstream 154614 5508665 ~ 5510746 (+)
sdhaf1 sdhaf1 other upstream 156967 5506546 ~ 5508393 (+)
qpctlb qpctl,qpctlb,LOC107706454,LOC107703555,LOC107708501,LOC107591735 other upstream 158927 5501103 ~ 5506433 (+)
tnksa tnksa,tnks,LOC107706493,LOC107681059,LOC107591704,LOC108279024,LOC108436993 other upstream 637314 4947584 ~ 5028046 (+)
neu3.1 neu3.1,LOC107718989,LOC107703553,LOC107706460,LOC107681103,LOC107548159 other downstream 66154 5732440 ~ 5735137 (+)
LOC122326918 LOC107706529,LOC107548159,LOC107681093,LOC107719017,LOC107573856,LOC107703552 other downstream 69627 5735913 ~ 5741905 (+)
LOC122326980 tnksa,LOC107706493,LOC107681059,LOC107589272,LOC107708542,LOC107703465,LOC103369208 other downstream 128476 5794762 ~ 5799702 (+)
G144152 NA other downstream 181655 5847941 ~ 5849053 (+)
G144330 NA other downstream 867814 6534100 ~ 6535794 (+)

Expression


Co-expression Network