LOC122326937


Basic Information

Item Value
gene id LOC122326937
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 2280581 ~ 2287288 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222159.1
GTAAAACAAATATGAGGAAGTAAAACAGCATTCCatattttcactttctttttttaggtgCTTAACACTACCAGGACAAggaAACAAAACATGTCAGAAGAAAGGATAAAGAAAAATCTTCCATCCGTTTCTAgCAAAAGAGTCTCTGAGATAAGAATTATCCTGATCGGGGGTCGAGAATATTCTGGACAAGCGTCAAGTGGAAAAAGCTCAACCGGAAACATCATTCTGGGCACAAATGCCTTTGAAGTTGGAAAAAGAACAGCCCGGTCTGTTAAAGCAGAAGCAGACGTACATGGAAGACGAGTGACTGTGGTTGACACCCCAGGCTGGTGGTGGCATTATTCTGTGGAAAACACTCCAAAGTTTGATAGACTAGAGATAATGAGAAGCCCAACACTGTGTCTTCCTGGACCTCATGCCTTCCTTTTGGTCATTCCTTTAGATCACAGGTTTTCAAATGATTATAGAATGGCTTTGGAGGAACAACTGGAGTATTTCTCTGAGCATATCTGGAGACACATTATAGTGTTGTTCAGCTCCATTGCTCCACATGAAGACAGATCTGTCAAAGATCAGCTTATAAAATGGCCAGACCTCCAAATGGTTCTAAGGAAATGTCAGAACCGATATCATGTTCTTAATATTAACAACAGGGATGACAGAATTCAAGTGATCACACTGCTGGAAAAAATTGATGAAATGGTAGCACAAAATAATCACAGTTACTTAATAATCAACAAAAGCATATCTGTAGAGgataaaaaagagaaagcaaaaaaagaaagaatcaaAAAGAGAATTCTTGCTGTGAAGAGACAAGGGGTTGAACGTCCAACACACATtaaaaGTGAGGAACAACATCTCACTGATATACACATTGTGATGGTTGGAGCATTGTCGGGTGCAAAGAGTTCTGCTGGCAATCTCATTCTAGGCAATGAAGTTTTTCAAGTTGGTGATGCAGGAAAAACATCGTGCTGTGAGGTTAGTCACGCTGAAGTGCATGGGAGGATGCTGACTGTGGTGGATACTCCAGGCTGGTTCTGCAAACATCCTCTTGAAAGTACACCAGTGTTAGACAAACTGGAGATTAGACATAGTGTTTATCTATCTCCACCTGGCCCACATGCTATTCTGTTAACTGTTCCCATTGTCACAGCATTTaacaaatctataaaaataGCATTGGAGGAACATATGGGTCTTTTAGGGAAGAAGGTCTGGAGCCATACAATTGTGCTGTTTACCTGGGGAGATTGGCTTGGAGAGACAACCATTGAGGAGCGCATTGAAGTAGAAGGAGAGCATCTTGAGTGGTTAATGGAACAATGTGGGTACAGATACCACGTTTTTAATAGTAAACAGCATACTGACAGCACACAGGTCACAGAACTCCTTGAGAAGATAGACAAAATGGTGATGGAAAACAATGACTGTCATTATGTGCCAGATGAGAAGATCAATCCATCCACCGAGCTTAAGCTGAAGCTAaagaaatccaaaataaatatgatgaaaGTGCGAAAACAAAAGGATATTCTTCAAGAGCTGCTTAAAGaaagaaaaaacaacctCTCAGATGTGAGGATTGTGCTTCTTGGAGCTGAAGGAGTTGGGAAAAGTCTATCAGGAAATACAATTctgcaaaacaatttttttgagaTGACACTAGAAGAGGCATTTAAAGTCCAGAGAAGAACAAGGCAATGTGTCATGAAACAGAGCAAAGTTGAAGGATGTCATGTCTCTGTGGTTGATACACCAGGCTGGTCAACATCAAACTTGGAAAATGCTAAAGAGATTTTACGCAGTGTGCAAATTTGTTCACCAGGTCCACATGCATTTCTGCTAGTGCTACCTCTTGACAagacttttacaaaaaaatctgaacaaacAGTTATGGAACTCATGAGCCTTTTTGGAGAGCATGCCTGGAGACACACAATAATTATATTCTTTGGACTATGGCTGAAAGACAGACCAGTGGAGCAGTACATTGCCTGTGAAGGAGAAGCTCTGCAGAAGCTCATAAAAAAGTGTGGAAACAGATATCATGTATTAACTTACTTGCATATTAAATCTCATGTTCTTAATTTGCTTGAAATGGTCGAAGACATGGTGACAAGAAACAGAGGGGAATATTTCACTCTAGAAAATGGTGGAAAAAAGGCAACATCAGTCTTCCGGTGGTTTACTGGGAAGTTACTCACTGAAGAGGAGTGGAACAAACGTGAGGATGAACTCATAGAGAGAATGCTGGAGGCCGCAGTTGCAGACCTAGATCAAGAATCCAAGCATCCATCTGCCAGACGAAAAGGAAGCTTCGGCCATGTGATCCCTAGTATGAGTGGAGATTCATTGTACGACACCACTAGTTCAGTTGGAGCTGGCATTCTGAGCCCTGCAGACAAAGTATCTCGATGGCTGAGGCATCCAAGAAATAAAGCACTATCATCTGGATACGACACCATGAGCACTGCATCAAGTTTTCAGGAATTAAAACCGGACAGTAACAAAGACATTCCACTGACCCAAAACCACCTTAGTGAAATGGACACTCCAAAATACAcaagaaacacaagaaaacaaaagcatacaAGATCATTCTCAATATAGAATCAATGTTCTCTACTACAAATTATgtgtaatgtaaattaatagTGTAGGCTTTCAATCAACATGTTATATGTGTTTTAGTTCCTTTGCAACAATTTCTGTATATGACTGagaaataatattcaaaatattgctaGTCTAAAAAAGAGGTGTGCTCATTGGTGGTGGGGCTATTTTGAAGAACTGAAAATAGACTGTGCCACAGACCAACTCAAACCTGGTCTAAAGTCAATGTCgcagtattttttgttatttgactTTGCCTATTACACACAGGGACAGCAGCACAcatgcttaatatttaaagcTAAAGGATTACAGTGTAAAGAATATTATTGTGTAGgctacatacatataaaatgttcagTCATTGCATGTATCAGAATTAACCCTTTTGCACGAGCAGGTCAGTTTCTTAAAGGGAATGGGAGATGAGATTGGTTTATTGCATGTTATGCCCAAAAAACACCCATTACTCATTAAGAGAATAGGTACAACCCATTTCAACTCTGCACCTAGGAGCACAGAACTTTTTCCCATCGTTAAAATGTGAACACGCCCAGAGTGCACCTGTGCCGTGTGCTATAGACTTTGAGTTTAGATTGTTAAAACTGGGCCGAGTATGTTCTAAGTATGAATACAAGTGATTATTGTGCAATAAATATATCTTGTAAGTTTCAGAATTTAAAACAGCTAACAACAGCTTACACTGGAGTCAGTCTGCCAAAACGACAGCTTTTATAATCTACTCTATGATGTAATACTGTCATGTATTGCTCTTCATTATTGCCTTGTCTGTTCTTGTGGTTAGCTTAATATgtactttatgtgtttttcacaATATCTTAAGttgtacaataaatacatataataaatagtaataattatttagcTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222159.1 True 3515 mRNA 0.39 7 2280581 2287288

Neighbor

gene id symbol gene type direction distance location
slc31a2 LOC107661547 coding upstream 281534 1995787 ~ 1999047 (+)
LOC122326700 NA coding upstream 327355 1949736 ~ 1953226 (+)
zgc:113162 LOC107692271,LOC107584524,LOC107661621,LOC107736869 coding upstream 431096 1830684 ~ 1849485 (+)
LOC122326489 camkk2,LOC107739694,LOC107736868,LOC108437385 coding upstream 450429 1809407 ~ 1830152 (+)
snrpd3l snrpd3,smd3,LOC105014836,LOC106563120 coding upstream 471742 1807195 ~ 1808839 (+)
LOC122326565 LOC107579035 coding downstream 330947 2618235 ~ 2627353 (+)
LOC122326563 LOC107579035,LOC107736917 coding downstream 343808 2631096 ~ 2656760 (+)
smarcb1b smarcb1b,smarcb1,LOC107661349,LOC107736887 coding downstream 457599 2744887 ~ 2752853 (+)
chchd10 chchd10,LOC107736936,LOC107692329,LOC107737885,LOC107662830 coding downstream 495060 2782348 ~ 2784025 (+)
ddt ddt,LOC107736937,LOC107662822,LOC107737884,LOC107692330 coding downstream 497185 2784473 ~ 2786135 (+)
G143315 NA non-coding upstream 98979 2181072 ~ 2181602 (+)
G143290 NA non-coding upstream 207920 2072174 ~ 2072661 (+)
LOC122326018 NA non-coding upstream 296491 1981923 ~ 1984090 (+)
G143149 NA non-coding upstream 317561 1839332 ~ 1963020 (+)
G143153 NA non-coding upstream 336078 1873761 ~ 1944503 (+)
G143339 NA non-coding downstream 47971 2335259 ~ 2335791 (+)
G143340 NA non-coding downstream 49493 2336781 ~ 2338470 (+)
G143354 LOC107595722,LOC107662860,LOC107739708,LOC107548798 non-coding downstream 111784 2399072 ~ 2400069 (+)
G143356 NA non-coding downstream 115459 2402747 ~ 2404090 (+)
G143349 NA non-coding downstream 139201 2426489 ~ 2490200 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other upstream 43386 2233659 ~ 2237195 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other upstream 223902 2030104 ~ 2056679 (+)
LOC122326311 NA other upstream 1051526 1227998 ~ 1229055 (+)
glrx glrx,LOC107661879,LOC107665229 other upstream 1124439 1153104 ~ 1156142 (+)
entpd2b entpd2b,LOC107662923,LOC107580497,LOC107736658 other upstream 1224656 1050838 ~ 1055925 (+)
gnrh2 LOC107595723 other downstream 541826 2829114 ~ 2830356 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other downstream 1010702 3297990 ~ 3320013 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other downstream 1414141 3701429 ~ 3704397 (+)
G143725 si:ch73-287m6.1,LOC107565381,LOC107708362 other downstream 1819513 4106801 ~ 4213772 (+)
G143726 si:dkey-112m2.1,LOC107661187,LOC107708339,LOC107565378,LOC107684910,LOC107566201,LOC108437247 other downstream 1845148 4132436 ~ 4386212 (+)

Expression


Co-expression Network