alg8 (alg8,LOC107731443,LOC107719005,LOC107703477,LOC107548176,LOC107551646)


Basic Information

Item Value
gene id alg8
gene name alg8,LOC107731443,LOC107719005,LOC107703477,LOC107548176,LOC107551646
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 6624931 ~ 6628770 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222173.1
GGGACTGTCATGGCTGCGCCCATGACTAACGATCAGAGCTGTTTTTTTGCTCTTGCTTTCGGAGTTTCATTTCTCAAATGTCTTTTGATAAATGCATAcCATTCTACGGATTTTGAAGTACATAGGAATTGGCTTGCCCTGACTCACAGTCTGCCAGTATCACAGTGGTATTATGAGgCTACATCTGAGTGGACACTGGATTATCCTCCCTTGTTTGCTTGGTTTGAATATGGACTTTCCCATATTGCCCGTTTTTTTGATAAGGAGATGCTGGTTGTTCACAACCTGAATTATGCAAGTCCAGCCACAATCCTGTTCCAAAGACTGTCAGTCATTGTGGCTGATTTGGTCTTCTTTTATGCGGTTAAAGAatgcTGCAAATGTTTGCGAGAAGTCAAAGGAAAGGACCTTCTGGGAAAGCCATCTTTTATCTTGTCAGTGCTGTTGCTGTGGAACTTTGGCCTTCTAATTGTTGATCATATTCATTTTCAGTATAATGGATTCTTGTTTGGAATTCTTCTGTTATCAATAGCGAGACATTTCCAGAATAGACACTTTGAGGGGGCCTTGCTGTTTTCAGTACTTCTAAACCTGAAGCACATATATCTGTACATTGCACCTGCATACGGTATCTACTTGctgagatgtttttgtttcaccCAGAGCAATTCAGatggcTCTTTGCAGTGGAGAAGTTTCAGTGTTGTGCGGCTTGTAACACTAGGAACTATTGTCTTGTCTACATTTTCGCTGTCATTTGGACCCTTTATAGCACTGggTCAGCTTCCACAAGTCCTGTCTCGACTCTTCCCTTTCAAGCGTGGTCTGTGTCATGCGTACTGGGCACCAAACATCTGGGCACTTTACAATATAGCAGATAAAGCTTTTTCCATCCTGGGTGTGAAATTCAAACTGCTTGATATAAACAAACTTCCCAAGGCCTCAATGACTGGTGGTCTGGTTCAGGAGTTTCAGCACTCTGTGCTTCCTTCTGTCTCTCCTTTAGCAACCCTTGTTTTTACGTTACTCTCAATATTGCCTGCACTTTTCAGGATATGGCATCGACCTAATGGAGCAAGAGGATTCTTGCACTGCCTTGTCATCTGTGCCCTTGGGTCCTTTATGTTTGGTTGGCATGTGCATGAGAAAGCCATCCTGATGGCCATACTTCCTTTAAGCTTGCTCGCTGTGGAGAGCAGAGAGGATGCCAGGATTTTTCTAATCCTAAGTATAACCGGTCATTATTCCCTATTTCCGCTCCTCTTCACAACTCAAGAGCTGCCCATCAAAATATTTCTCATGTTGCTTTTtacaatcttcagtgtcacttcaCTAAAAACGCTGTTCAGGAAGGACGGTGCTTTGTTAAACCCACTGGAGGCGTCGTATCTATTGGGCCTAATTCCTCTTGAACTGATCTGTGAGTTTGTTTACCCACTGACAGTCTGGCAGAAGACCTTTCCCTTCTTCCCTCTCATGCTCATCTCCGTTTACTGCGCGTTGGGAGTGACATACGCCTTCATCAGACTGTACATTTCATTTCTGACATGTTCAGACAACACCAAAAAGATTAAAATGCAGTGAATTGTGATTCAGATGCTGAAGGctattgaacaaaaaaaaaaatattggaccAAAATGAATGATTTGTAGTTTATATCTTGGGATTTGTTTGTGGGATATGGGTTTGTGTTCAGttgattatttctttaaataattatataatgtagTGTATGgatacaaatgtttattttttaaggtgttttataaatgtatttgcttaGAA

Function

symbol description
alg8 Predicted to enable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity. Predicted to be involved in oligosaccharide-lipid intermediate biosynthetic process and protein N-linked glycosylation. Predicted to be located in endoplasmic reticulum. Predicted to be active in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Ih and polycystic liver disease. Orthologous to human ALG8 (ALG8 alpha-1,3-glucosyltransferase).

NR:

description
hypothetical protein cypCar_00026810

GO:

id name namespace
GO:0006487 protein N-linked glycosylation biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0046527 glucosyltransferase activity molecular_function

KEGG:

id description
K03849 ALG8; alpha-1,3-glucosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222173.1 True 1786 mRNA 0.41 13 6624931 6628770

Neighbor

gene id symbol gene type direction distance location
pcf11 LOC107681148,LOC107731451,LOC107548175,LOC107718956,LOC107551645,LOC107703528 coding upstream 4788 6611003 ~ 6620143 (+)
ddias LOC107731438,LOC107681101,LOC107603284,LOC107718991 coding upstream 14178 6607753 ~ 6610753 (+)
birc2 birc2,LOC107703529,LOC107731450,LOC107718959,LOC107551643,LOC107548174,LOC107681145 coding upstream 30969 6585713 ~ 6593962 (+)
arhgap42a arhgap42,LOC107703530,LOC107551641,LOC107718960 coding upstream 56908 6546071 ~ 6568023 (+)
bud13 si:dkeyp-69c1.6,LOC107703532,LOC107718963 coding upstream 96376 6524949 ~ 6528555 (+)
htr3b htr3b,LOC107548134,LOC107681116,LOC107731437,LOC107551604,LOC103041566 coding downstream 86235 6715005 ~ 6720847 (+)
htr3a htr3a,LOC107731461,LOC107681109,LOC107548135,LOC107719004,LOC107703474,LOC107551655 coding downstream 93396 6722166 ~ 6727215 (+)
LOC122326099 zw10,LOC107703521,LOC107731459,LOC107718948,LOC107551653 coding downstream 280788 6909558 ~ 6915682 (+)
LOC122326102 dlat,LOC107731458,LOC107718949,LOC107703522,LOC107681164 coding downstream 287386 6916156 ~ 6924635 (+)
LOC122326105 LOC107551650,LOC107703526,LOC107731455,LOC107718953,LOC107548182 coding downstream 419167 7047937 ~ 7051098 (+)
G144353 NA non-coding upstream 1355 6622464 ~ 6623576 (+)
G144348 NA non-coding upstream 17585 6606847 ~ 6607346 (+)
G144347 LOC107731449,LOC107681146 non-coding upstream 18901 6605481 ~ 6606030 (+)
G144317 LOC107703481,LOC107551613 non-coding upstream 87790 6497701 ~ 6537141 (+)
G144329 NA non-coding upstream 91352 6532040 ~ 6533579 (+)
G144351 NA non-coding downstream 8353 6637123 ~ 7018763 (+)
G144370 NA non-coding downstream 67939 6696709 ~ 7085923 (+)
G144367 zbtb16 non-coding downstream 70222 6698992 ~ 6736633 (+)
G144371 LOC107731460,LOC107603286,LOC107681181,LOC107718946 non-coding downstream 74132 6702902 ~ 7091450 (+)
G144366 NA non-coding downstream 103300 6732070 ~ 6796946 (+)
cfap300 si:rp71-1p14.7,cunh11orf70,LOC107731447,LOC107548131,LOC107681129 other upstream 39897 6582746 ~ 6585034 (+)
G144330 NA other upstream 89137 6534100 ~ 6535794 (+)
G144152 NA other upstream 775878 5847941 ~ 5849053 (+)
LOC122326980 tnksa,LOC107706493,LOC107681059,LOC107589272,LOC107708542,LOC107703465,LOC103369208 other upstream 825229 5794762 ~ 5799702 (+)
LOC122326918 LOC107706529,LOC107548159,LOC107681093,LOC107719017,LOC107573856,LOC107703552 other upstream 883026 5735913 ~ 5741905 (+)
anapc13 anapc13,anc13,LOC107756075,LOC107693524,LOC107561055 other downstream 1278694 7907464 ~ 7909027 (+)
LOC122326775 si:dkey-183i3.9,LOC107715278,LOC107669329 other downstream 1579033 8207803 ~ 8211125 (+)
si:dkey-183i3.6 NA other downstream 1588205 8216975 ~ 8221572 (+)
G144746 NA other downstream 1939265 8568035 ~ 8568673 (+)
tmsb NA other downstream 2049521 8678291 ~ 8679513 (+)

Expression


Co-expression Network