LOC122326952


Basic Information

Item Value
gene id LOC122326952
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 3336985 ~ 3338965 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222180.1
ATGATGCACTGCTATTATAAAATTGCAAAAACAAACTCTGTATTTggacacaaaacacaaagaccCGCAACTGTACAAGTGTCAGAACAAGACCAGGGCATTAAAACTATTCATATCCCTAAGACCATAACTGCTGCTCCATTTTTACAGcACCCAAGCCTTACACCTGGACAGAAGCGTTTTCTGTATAGTATTGCAGAGGCCTACAGTAAAGAGCACATGCGACAGTTAATATGTCAACACTATATGAATGTATTACACCGCTGTATCAGGACAGTGCCAGATGCAAGTGTGAATCTAAATGTGAAGGTGCAGATGTCAACATACACTCCGCAAGAAGAGCACACGACAAATTCCCAAAGTGCACCTAAGAGCAAGACGAaagaaagtggaaaaaaaaaaacaactttaccAAAAATTGCGAAGCATCAAAGAATGTCCTCTGGATTAGCAAAATCAAACACGATACattcaagaaagaaaaagactaGCAATGCAAAACATGCTTCGTCACGGGAATCGCATCCATGGGAGGACGACTTTGAATGGGACTCTTACCTCGCTGGACACATGAGTGGCCTATCTTTCAATGAATCGGAAGACGACGATGAGGACTTTCTATTCCTTAGCTAACACATCAATCTAGGTTTTATTTGTCACCATCGAAATCCAAATATCAAGATCATTCTTAAAACGTACCCAGTTTTAAGTAAAAAGCTTCTCCAGACATTtcaaaatagtcattttaataatgtgcattctgtgttttcttataaaataaaaaacaaaacaaaaacaaaattacactGCTTATGTGATGTGgggttttattttatgaaagatGACTTGACATGGGCCTTGAAAAATTAATGGGGCACATAACATATGTAGAAGACTAATTCACTAACATTATGCAAATAATGCAGCATTATTGCATCCTCAACAACCATCTGCCAAAACCACAATGCTGACATTCCGGTGACATATAaacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222180.1 True 993 mRNA 0.38 6 3336985 3338965

Neighbor

gene id symbol gene type direction distance location
LOC122326784 ube2g1b,ub2g1,LOC107686891,LOC107595690,LOC106579958,LOC103152401,LOC106931442 coding upstream 7180 3326500 ~ 3329805 (+)
LOC122326816 NA coding upstream 42977 3291697 ~ 3294008 (+)
LOC122326343 LOC107692324,LOC107595714,LOC107737877,LOC107686912,LOC107736923,LOC107563914 coding upstream 360934 2966166 ~ 2976051 (+)
LOC122326342 NA coding upstream 372309 2957186 ~ 2964676 (+)
LOC122326345 NA coding upstream 380405 2954779 ~ 2956580 (+)
LOC122326141 aqp3b,LOC107686895,LOC107737882,LOC107692335,LOC107707134,LOC107556931,LOC107595728 coding downstream 137018 3475983 ~ 3480494 (+)
LOC122326336 vps29,LOC107595689 coding downstream 155019 3493984 ~ 3497228 (+)
gpn3 gpn3,LOC107686892,LOC107692302,LOC106563155 coding downstream 160680 3499645 ~ 3502742 (+)
arpc3 arpc3,LOC107737855,LOC107707141 coding downstream 164257 3503222 ~ 3505587 (+)
atp2a2b atp2a2b,atp2a2,LOC107708347,LOC107556944,LOC108444117 coding downstream 175068 3514033 ~ 3542738 (+)
LOC122326852 NA non-coding upstream 296 3336261 ~ 3336689 (+)
G143578 NA non-coding upstream 21512 3315177 ~ 3315473 (+)
G143509 NA non-coding upstream 399368 2930262 ~ 2937617 (+)
G143491 NA non-coding upstream 473968 2862772 ~ 2863017 (+)
G143465 NA non-coding upstream 535637 2800730 ~ 2801348 (+)
G143590 NA non-coding downstream 149546 3488511 ~ 3492587 (+)
G143638 NA non-coding downstream 269954 3608919 ~ 3610050 (+)
G143656 NA non-coding downstream 412634 3751599 ~ 3752198 (+)
LOC122326834 NA non-coding downstream 424367 3763332 ~ 3769556 (+)
G143664 NA non-coding downstream 464493 3803458 ~ 3803769 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other upstream 16972 3297990 ~ 3320013 (+)
gnrh2 LOC107595723 other upstream 506629 2829114 ~ 2830356 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other upstream 1099790 2233659 ~ 2237195 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other upstream 1280306 2030104 ~ 2056679 (+)
LOC122326311 NA other upstream 2107930 1227998 ~ 1229055 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other downstream 362464 3701429 ~ 3704397 (+)
G143725 si:ch73-287m6.1,LOC107565381,LOC107708362 other downstream 767836 4106801 ~ 4213772 (+)
G143726 si:dkey-112m2.1,LOC107661187,LOC107708339,LOC107565378,LOC107684910,LOC107566201,LOC108437247 other downstream 793471 4132436 ~ 4386212 (+)
si:ch211-222n4.2 LOC107722820,LOC107591717,LOC107685267,LOC107589267,LOC107706417 other downstream 1172961 4511926 ~ 4524180 (+)
btc LOC107706483,LOC107681194,LOC107722828,LOC107703511 other downstream 1366192 4705157 ~ 4709441 (+)

Expression


Co-expression Network