LOC122326973 (or125-1,LOC107573645,LOC107719002,LOC107719001,LOC107703447,LOC107703448)


Basic Information

Item Value
gene id LOC122326973
gene name or125-1,LOC107573645,LOC107719002,LOC107719001,LOC107703447,LOC107703448
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 5672344 ~ 5674110 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222199.1
ATGGATAACACGTCTTATCCTGTCATACTGACTCTTATGGTGCCAAAAGAAACTAAATCATATagacatgtatatattatttgcttttttaccTTATATCTACTTATATtgacaattaatatatatattgttatggTCATTATAATAGAGAAAGCTCTTCATGAACCAATGTACATATTCTTGTGTCATATGTGCATAAATGGAGTTTATGGCGCTTCAGGATTCTACCCTAAATTTCTTTCTGATTTAATATTGGATTCATATGTGATCTCCTCTCCCATGTGTACTTTACAAACCTTTGTTATTTACAGTTCATTACTTTCTGAGATCACAATATTAACAGTGATGGCTTATGATAGATACATAGCCATATGCAAACCTTTAGAGTATCATTCCAAATTAACTAAAAACACCTGtgtgaaattaattttgttttcatggaTGGTTTCTAACTCCCTCCCAGCTATATGTGTCCTGTTATCAAAGTTGAGACCCTTTTGTAAATATCACATTGACAAATTATATTGTGACAACTGGTCAGTTGTAAAACTGTCTTGTGCATCATCTTTTGTTAATAATGTCATTGGATATGCcatagctgttttatttttgagctttatattttttattattgtgtctTACATTAAACTGATATCTGCATGTAAAGCATctttagaaaacagaaaaaaattctgGCAAACATGTTTGCCACATGTATTTTCACTGATAAATTTCACTATTGCTATCCTTTTTGATATTATGTATAGTAGGTATGGTGCAAATGATATTTCAGAGAGTTTGCGTAATTTTTTGGCTCTAGAACTGATGATAGTTCCACCTGTGTTCAATCCTCTGATCTATGGTTTAAATATCAGAGCAGTGCGCAAAAGAGTTTTCACTTTGTGTTGCATGAGGgGCTCTGATCAATGA

Function

NR:

description
PREDICTED: olfactory receptor 4S2-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007608 sensory perception of smell biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004984 olfactory receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222199.1 True 930 mRNA 0.32 2 5672344 5674110

Neighbor

gene id symbol gene type direction distance location
LOC122326972 LOC107706424,LOC107681105,LOC107603271 coding upstream 1976 5669415 ~ 5670368 (+)
or62b5 or125-3,LOC107703496,LOC107719020,LOC107573648 coding upstream 6058 5665360 ~ 5666286 (+)
or62b3 LOC107719021,LOC107703497,LOC107573649 coding upstream 9694 5661724 ~ 5662650 (+)
LOC122326971 or125-7,LOC107573644,LOC107719003,LOC107703451 coding upstream 19106 5652309 ~ 5653238 (+)
LOC122326807 LOC107742230,LOC107703498,LOC107573064,LOC107735684 coding upstream 25009 5646442 ~ 5647335 (+)
LOC122326974 or125-1,LOC107719002,LOC107573645,LOC107719001,LOC107703448,LOC107703447,LOC107573646 coding downstream 4960 5679070 ~ 5686068 (+)
LOC122326975 or125-1,LOC107719002,LOC107573645,LOC107703448,LOC107719001,LOC107703447 coding downstream 12088 5686198 ~ 5687139 (+)
LOC122326976 LOC107719001,LOC107703447,LOC107719002,LOC107573645,LOC107703448 coding downstream 20851 5694961 ~ 5695911 (+)
or61a1 LOC107703446 coding downstream 23297 5697407 ~ 5698345 (+)
LOC122326977 LOC107703495,LOC107718999,LOC107703444 coding downstream 27362 5701472 ~ 5702410 (+)
G144126 cbr1l,LOC107706524,LOC107573060,LOC107681174,LOC792137,LOC107589305 non-coding upstream 39493 5632041 ~ 5632851 (+)
G144081 LOC107708509 non-coding upstream 132880 5538200 ~ 5539464 (+)
G143990 LOC107589256,LOC107706512,LOC107681141,LOC107708519 non-coding upstream 297422 5366192 ~ 5374922 (+)
G144007 NA non-coding upstream 343939 5327230 ~ 5328405 (+)
G143937 NA non-coding upstream 520455 5151557 ~ 5151889 (+)
G144129 NA non-coding downstream 10718 5684828 ~ 5685097 (+)
G144130 NA non-coding downstream 31430 5705540 ~ 5706835 (+)
LOC122326140 NA non-coding downstream 118754 5792864 ~ 5794604 (+)
G144157 nkx6.1,nkx6-1,LOC107703597,LOC107700773,LOC107706438,LOC107722812 non-coding downstream 255659 5929769 ~ 5930885 (+)
G144212 NA non-coding downstream 388314 6062424 ~ 6062680 (+)
kcnk12l LOC107589263,LOC107708511,LOC107703554,LOC107591682,LOC107681176 other upstream 154408 5502033 ~ 5517936 (+)
G144077 NA other upstream 161598 5508665 ~ 5510746 (+)
sdhaf1 sdhaf1 other upstream 163951 5506546 ~ 5508393 (+)
qpctlb qpctl,qpctlb,LOC107706454,LOC107703555,LOC107708501,LOC107591735 other upstream 165911 5501103 ~ 5506433 (+)
tnksa tnksa,tnks,LOC107706493,LOC107681059,LOC107591704,LOC108279024,LOC108436993 other upstream 644298 4947584 ~ 5028046 (+)
neu3.1 neu3.1,LOC107718989,LOC107703553,LOC107706460,LOC107681103,LOC107548159 other downstream 58330 5732440 ~ 5735137 (+)
LOC122326918 LOC107706529,LOC107548159,LOC107681093,LOC107719017,LOC107573856,LOC107703552 other downstream 61803 5735913 ~ 5741905 (+)
LOC122326980 tnksa,LOC107706493,LOC107681059,LOC107589272,LOC107708542,LOC107703465,LOC103369208 other downstream 120652 5794762 ~ 5799702 (+)
G144152 NA other downstream 173831 5847941 ~ 5849053 (+)
G144330 NA other downstream 859990 6534100 ~ 6535794 (+)

Expression


Co-expression Network