LOC122326977 (LOC107703495,LOC107718999,LOC107703444)


Basic Information

Item Value
gene id LOC122326977
gene name LOC107703495,LOC107718999,LOC107703444
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 5701472 ~ 5702410 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222204.1
ATGGAAAACATCTCCTTTTCCCACATTCTCACTGTCACGGCTCTGAATGAGTGGAACTGGACCAGCAggatcatatttttttctttcgcGCTTCCCGTTTATCTTCTGACAATTGTTCTGAATGCCACcttgattatgattattactTTTGAGAAAGCCCTGCATGAGCCCATGtacattttcttgtttaatcTGTGTGTTAATGATCTGTGCGGAACTACAGGGTTTTATCCCCgggctttattttatttactcgCAGAAACAAACAGGATTTCGCTTGAGGGATGTATCACACAGAGTCTTGTCATCATTGTTTATGGTGCTGGTGAATTCTCAAATTTAAGTGTCATGGCTGTCGACAGGTACATAGCGATCTGTCGACCCTtacattattacagtattatgtCACCTTTCGCTGTGCGGAGCCTGGTGGCTTTTATTTGGATATATCCTTGTTTTCTGAGTATAATGGCTATTTTAGCTGCTATGAAGCACCCTTTTTGCAGACATGAGATAGATAAACTTTTCTGTGAAAACCTGTCCTTGGTTAATCTTGCATGCAAACATGATATTTTGAATGGTATTTTTAACGGATGGATGTATGCCACTGCAATTGTCTTAAttagtttagttttgatttcctattttaaaataattctagcTTGTAGAAGATCTAAAGTAAATCAAGAGAAGTTCTTCAGCACATGCATGCCGCACTTGATTTCCTTCCTTAACTACATAGCCTGTGTTTTTGTTGATTCTTCCCAGACAGAATTAAGAACAAAAACATTGCCTCAGATGTTATATAcactttttactgtaatattccTGATTGTTCCCCCTGTCATCAATCCTTTAATATATGGTATAAAATTAGGTCCAGTAAGGGCAAAAATACTGTGCATTTTTAGAAGATTAATAATTAAGAACTTAGTATAG

Function

NR:

description
PREDICTED: olfactory receptor 15-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007608 sensory perception of smell biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004984 olfactory receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222204.1 True 939 mRNA 0.37 1 5701472 5702410

Neighbor

gene id symbol gene type direction distance location
or61a1 LOC107703446 coding upstream 3127 5697407 ~ 5698345 (+)
LOC122326976 LOC107719001,LOC107703447,LOC107719002,LOC107573645,LOC107703448 coding upstream 5561 5694961 ~ 5695911 (+)
LOC122326975 or125-1,LOC107719002,LOC107573645,LOC107703448,LOC107719001,LOC107703447 coding upstream 14333 5686198 ~ 5687139 (+)
LOC122326974 or125-1,LOC107719002,LOC107573645,LOC107719001,LOC107703448,LOC107703447,LOC107573646 coding upstream 15404 5679070 ~ 5686068 (+)
LOC122326973 or125-1,LOC107573645,LOC107719002,LOC107719001,LOC107703447,LOC107703448 coding upstream 27362 5672344 ~ 5674110 (+)
pold3 pold3,LOC107706527,LOC107548157,LOC107719019,LOC107573853 coding downstream 4712 5707122 ~ 5712844 (+)
LOC122326891 rpl17,LOC107722835,LOC107700774,LOC107703598 coding downstream 220581 5922991 ~ 5925662 (+)
LOC122327012 NA coding downstream 221010 5923420 ~ 5923495 (+)
LOC122327009 NA coding downstream 221879 5924289 ~ 5924361 (+)
LOC122327007 NA coding downstream 223056 5925466 ~ 5925527 (+)
G144129 NA non-coding upstream 16375 5684828 ~ 5685097 (+)
G144126 cbr1l,LOC107706524,LOC107573060,LOC107681174,LOC792137,LOC107589305 non-coding upstream 68621 5632041 ~ 5632851 (+)
G144081 LOC107708509 non-coding upstream 162008 5538200 ~ 5539464 (+)
G143990 LOC107589256,LOC107706512,LOC107681141,LOC107708519 non-coding upstream 326550 5366192 ~ 5374922 (+)
G144007 NA non-coding upstream 373067 5327230 ~ 5328405 (+)
G144130 NA non-coding downstream 3130 5705540 ~ 5706835 (+)
LOC122326140 NA non-coding downstream 90454 5792864 ~ 5794604 (+)
G144157 nkx6.1,nkx6-1,LOC107703597,LOC107700773,LOC107706438,LOC107722812 non-coding downstream 227359 5929769 ~ 5930885 (+)
G144212 NA non-coding downstream 360014 6062424 ~ 6062680 (+)
G144308 LOC107706534,LOC107548126,LOC107681195,LOC107703486,LOC107719012,LOC107551634 non-coding downstream 760240 6462650 ~ 6462933 (+)
kcnk12l LOC107589263,LOC107708511,LOC107703554,LOC107591682,LOC107681176 other upstream 183536 5502033 ~ 5517936 (+)
G144077 NA other upstream 190726 5508665 ~ 5510746 (+)
sdhaf1 sdhaf1 other upstream 193079 5506546 ~ 5508393 (+)
qpctlb qpctl,qpctlb,LOC107706454,LOC107703555,LOC107708501,LOC107591735 other upstream 195039 5501103 ~ 5506433 (+)
tnksa tnksa,tnks,LOC107706493,LOC107681059,LOC107591704,LOC108279024,LOC108436993 other upstream 673426 4947584 ~ 5028046 (+)
neu3.1 neu3.1,LOC107718989,LOC107703553,LOC107706460,LOC107681103,LOC107548159 other downstream 30030 5732440 ~ 5735137 (+)
LOC122326918 LOC107706529,LOC107548159,LOC107681093,LOC107719017,LOC107573856,LOC107703552 other downstream 33503 5735913 ~ 5741905 (+)
LOC122326980 tnksa,LOC107706493,LOC107681059,LOC107589272,LOC107708542,LOC107703465,LOC103369208 other downstream 92352 5794762 ~ 5799702 (+)
G144152 NA other downstream 145531 5847941 ~ 5849053 (+)
G144330 NA other downstream 831690 6534100 ~ 6535794 (+)

Expression


Co-expression Network