LOC122326018


Basic Information

Item Value
gene id LOC122326018
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 1981923 ~ 1984090 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247411.1
cTCAGCTGATAGACACGCTACAGGAGAGATTAGAACAACTACATGCAGCAGCGGGAGGATGAATGAGCTCGTGACGCAATGACGCTGACGTGGGTGCTTCCTCTCAGGGTTGTCATCAGATAGCTCAAGGTCCTTGCCcggagaaaataaatatttttattattaccatcATATTCAGAGATCCACAATCTTCAAGACTCAGTTGTTCTGAGGGACCTTTTCCAATTGCTCGGGTTCATGGTACGTGGCCTGGATGGTGGGAATTTATACAAAGAACGCTGCACTGCAAACCAGAgagattcaaaaataaaacagacatgaAAACTTA

Function

GO:

id name namespace
GO:0005179 hormone activity molecular_function
GO:0030545 receptor regulator activity molecular_function
GO:0048018 receptor ligand activity molecular_function
GO:0030354 melanin-concentrating hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247411.1 True 328 lncRNA 0.44 2 1981923 1984090

Neighbor

gene id symbol gene type direction distance location
LOC122326700 NA coding upstream 28697 1949736 ~ 1953226 (+)
zgc:113162 LOC107692271,LOC107584524,LOC107661621,LOC107736869 coding upstream 132438 1830684 ~ 1849485 (+)
LOC122326489 camkk2,LOC107739694,LOC107736868,LOC108437385 coding upstream 151771 1809407 ~ 1830152 (+)
snrpd3l snrpd3,smd3,LOC105014836,LOC106563120 coding upstream 173084 1807195 ~ 1808839 (+)
adora2ab adora2ab,LOC107736926,LOC107600912,LOC107675636,LOC107584529,LOC107739748,LOC107661642 coding upstream 177011 1796942 ~ 1804912 (+)
slc31a2 LOC107661547 coding downstream 11697 1995787 ~ 1999047 (+)
LOC122326937 NA coding downstream 296491 2280581 ~ 2287288 (+)
LOC122326565 LOC107579035 coding downstream 634145 2618235 ~ 2627353 (+)
LOC122326563 LOC107579035,LOC107736917 coding downstream 647006 2631096 ~ 2656760 (+)
smarcb1b smarcb1b,smarcb1,LOC107661349,LOC107736887 coding downstream 760797 2744887 ~ 2752853 (+)
G143149 NA non-coding upstream 18903 1839332 ~ 1963020 (+)
G143153 NA non-coding upstream 37420 1873761 ~ 1944503 (+)
G143155 NA non-coding upstream 98393 1877671 ~ 1883530 (+)
G143144 NA non-coding upstream 216828 1764761 ~ 1765095 (+)
G143140 NA non-coding upstream 218180 1763476 ~ 1763743 (+)
G143290 NA non-coding downstream 88084 2072174 ~ 2072661 (+)
G143315 NA non-coding downstream 196982 2181072 ~ 2181602 (+)
G143339 NA non-coding downstream 351169 2335259 ~ 2335791 (+)
G143340 NA non-coding downstream 352691 2336781 ~ 2338470 (+)
G143354 LOC107595722,LOC107662860,LOC107739708,LOC107548798 non-coding downstream 414982 2399072 ~ 2400069 (+)
LOC122326311 NA other upstream 752868 1227998 ~ 1229055 (+)
glrx glrx,LOC107661879,LOC107665229 other upstream 825781 1153104 ~ 1156142 (+)
entpd2b entpd2b,LOC107662923,LOC107580497,LOC107736658 other upstream 925998 1050838 ~ 1055925 (+)
alpk2 LOC107600938,LOC107662700 other upstream 1175817 735722 ~ 806106 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other downstream 46014 2030104 ~ 2056679 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other downstream 249569 2233659 ~ 2237195 (+)
gnrh2 LOC107595723 other downstream 845024 2829114 ~ 2830356 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other downstream 1313900 3297990 ~ 3320013 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other downstream 1717339 3701429 ~ 3704397 (+)

Expression


Co-expression Network