LOC122326263


Basic Information

Item Value
gene id LOC122326263
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 172944 ~ 180049 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247457.1
AAAAGTCACTGGTGTGTTTTCAATTGCCGTGAGGTTGGTTGACGGGAAGCCCTCATATGCCGAATCTTCATAAAATAATGTCATCTCTGTACGTCTCTGAACAAGCAGGATTTCAAACAGCATAACAAGCCGGATGCGAGACCCGCTATCCAGACCGCAGCAGAGCAGACAGCTTTATATCTGAGAAGTCTgaacttcagaaaggttacaggatgaaccaccgccagATATTTTAttgtccatttattttaaatggatagCGCACCTGTCCTAAAAAAGTCACATGGGGAGCTTCAACAAAAGAACCACAGTTTTCCAACCCGGTGgagataaagaacaggctgcACAAAACTAGACAGATTGAAACACATGAAGGATTCTTCAGAGCCCAGAGAACAGACACACAGCAGAAGAGGTTTACGGAAAGAAAGAGTAAAAACTGAAggacataaaaacacatatatgcATTGAAATGGTCGACTGCAGTAAACATACAAAACAAGCAGGAGATGAGAGTCGTAAACCACACAGCAGCAGAACAGTATAATttatatctgagaggtttgtacttcagaaaggttacaggatgaaccaccgccaggtaacgctcaacacagatcagacactgaaacagaggacgaccggtgatggTAAATCCTATTGTACagatactaaatatatatacttctgGAAATCTTGTAgccaaaaaaatcatgaaataatCCACACAAATAATCATCTCACAAATAGAAAGGTTGAAGTTTAGAAACTCAGACATAATTCTTCTTTCTGTCACAATAAGCCACAGGACATAGCCGTGTGTCGGAGGCCCAAACAGGATACTGAAACACAGCACAGAAGTCCTGAAACTGTACAATTGAAAGTCAAGCGACGTAACGTTGAGATGCGGATTCAGATTAGGAATGGAGGAGTTCTCAAATCCAGTCATCTTCTCAGTGTATATCCATTCACTTTCAAAGAAAAGCAAACATGGGTCTAACATGATATacttaaaacaaacaatcataTATATCCCAACCAAACAATGACAACTAATGATtattgacaaaacaaaaaaggttcaTAAAAACGTTCAGTGTTTTGCGTTTTTCTCAGACAAAGCTTTGAAAATGTTCTTAAAGTAGTACAGAAGTAACATAatatccctgctgaaaaaaactatagaaaatAATACAGACATTCCAATAGTTTCTATACAAATACTATTGCAACCATTAGGCTGTCAATTAGCTACTATGTTTTTGAGACATATTCCATTAGGATTTATTAGTTATGGGTTTTAACAAACCACCAGTAGAAGGTGACAAATTACCAGTAGAGATCAATAATCacagttttaataattagtttccattgaaaccaaaaaatgtattataatttgcTAAATTCTGCAATTAAGTCTATTTGTTTGGGGGTTTTTCTGCAATTAGAATGGGTTGAAAATCAACAACCAACAATGCAATAACATGTCTAGTTATTAATTACTAGGTACAAAAGATTGCAATGCGAAATgctaaacaaatacaataacagATTATAAAGATAGAATTTATCTTCACCCGTAAAGTGAATTTCCAGACAATCCAGATGAAGACGTTTTGTAGACTGACTACACAGCTGTCATATATGACATTTATGTACCTAGCATGACATAAACAACAGAGATGCAAATAAGACGGATCATATATCACAGCTGGAAATGTATGGGAGGTATATTCCAATTAAATATTGGTTAAAAGAacatttggttacactttattttaaggtgtcgtaatacctaattaggtacttagtaATAGCCATTGCAAgtacatgaaaaataatatgtacTTATCATGTTACTAAGTTATGAAACAACCcataattacagtttgtaattatgtagatgtaacaggcagctacaCGTATGTAACATACTGTTACACAACTACTTACACTTATGTACAATCTTGATATACTTGATATACTTtcttttaagtagcttatgcctgcataatattctgtaattttttgttagatttttcatttttaattagatttaccCTATATTTAAGCTGTATACTAatgggttaaatcaaactaaggtgCAACTTAAGTACTTATTTCAGTTTACTCGAATTATAAGTCTGCAACACATATTTGACAATCATTTGGCTACATAAGTAGCTGTACAACAGACATATTCTCTGTAACGATAGCAACTTATTACATAATTACAGACTGTGTGTACAAATTGTTGTCTCACCCTTTAAAATGGGCCgtaacatatacatacatacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247457.1 True 2302 lncRNA 0.35 4 172944 180049

Neighbor

gene id symbol gene type direction distance location
LOC122326942 NA coding upstream 82707 88162 ~ 90237 (+)
mapk10 mapk10,LOC107749009,LOC107662288,LOC108278438,LOC102308224 coding downstream 83463 263512 ~ 323760 (+)
LOC122326268 herc1,LOC107701925,LOC108436580 coding downstream 257725 437774 ~ 495164 (+)
ccbe1 ccbe1,LOC107662219,LOC107701959,LOC107584559,LOC107719070,LOC107600894,LOC107739739 coding downstream 496817 676866 ~ 723059 (+)
lman1 lman1,LOC107662211,LOC107739740,LOC107701961,LOC107719069 coding downstream 550743 730792 ~ 742946 (+)
cplx4a cplx4,cplx4a,LOC107662952,LOC107719084,LOC107739741,LOC107701934 coding downstream 566193 746242 ~ 750644 (+)
G142658 NA non-coding downstream 2367 182416 ~ 196202 (+)
G142672 NA non-coding downstream 22738 202787 ~ 203175 (+)
G142729 LOC107749016,LOC107565393,LOC107701931,LOC107719087,LOC107584674,LOC107662962 non-coding downstream 251575 431624 ~ 434122 (+)
G142807 NA non-coding downstream 546209 726258 ~ 726592 (+)
G142832 NA non-coding downstream 579226 759275 ~ 812057 (+)
alpk2 LOC107600938,LOC107662700 other downstream 555673 735722 ~ 806106 (+)
entpd2b entpd2b,LOC107662923,LOC107580497,LOC107736658 other downstream 870789 1050838 ~ 1055925 (+)
glrx glrx,LOC107661879,LOC107665229 other downstream 973055 1153104 ~ 1156142 (+)
LOC122326311 NA other downstream 1047949 1227998 ~ 1229055 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other downstream 1850055 2030104 ~ 2056679 (+)

Expression


Co-expression Network