G148089


Basic Information

Item Value
gene id G148089
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 482211 ~ 558874 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU218834
CAGTTGCATTTATaatcactttattattattttaacatgagACAAGACTCTTCTGACTGCTGAAGAAAACCTTGCTCtacaagcatttatttattgaatatacaGATCTCCAGACAAACTCTGAAACAACAAACACGTCTCTTTATGGAGTGATGAGCAGAAATATCATATGATCTGTGTCCTGTCTAGAGTGTGTGtggaagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagcatcAGTCGTACCGCGTGCGCTGGAAACGCTCGCAGCATCACTGCATTAAAGCCTTTATAGAGCGAGCCGATGCCCTCCTCCCGGATCAGCTCTCGCAGGACGTCCCGGAAGCCGTTGGGATATTTGCCCTCTGG

Function

GO: NA

KEGG:

id description
ko04120 Ubiquitin mediated proteolysis

RNA

RNA id representative length rna type GC content exon number start site end site
TU218834 True 390 lncRNA 0.45 2 482211 558874

Neighbor

gene id symbol gene type direction distance location
ndufaf3 ndufaf3 coding downstream 10086 469445 ~ 472125 (-)
LOC122327957 tmem43,LOC107735555,LOC107719053 coding downstream 22741 453851 ~ 459470 (-)
LOC122328026 LOC107571577,LOC107719042,LOC107705002 coding downstream 34203 445497 ~ 448008 (-)
LOC122327827 LOC107575631,LOC107667978,LOC107741456,LOC107569100,LOC107741609,LOC107566978 coding downstream 357944 122594 ~ 124267 (-)
LOC122328013 crocc,LOC107719028,LOC107574121 coding upstream 7005 565879 ~ 584661 (-)
necap2 LOC107574125 coding upstream 27242 586116 ~ 589866 (-)
ssu72 ssu72,LOC107690546,LOC107573776 coding upstream 34915 593789 ~ 598606 (-)
fndc10 fndc10 coding upstream 40241 599115 ~ 601837 (-)
LOC122328027 ora3,LOC107656912,LOC107573774,LOC107722995 coding upstream 46830 605704 ~ 608391 (-)
G148091 NA non-coding downstream 1491 479495 ~ 480720 (-)
G148081 NA non-coding downstream 8665 472876 ~ 473546 (-)
G148099 NA non-coding downstream 28411 452244 ~ 453800 (-)
G148095 NA non-coding downstream 39543 441728 ~ 442668 (-)
G148067 NA non-coding downstream 57815 387596 ~ 424396 (-)
G148127 med20,LOC107581150 non-coding upstream 128251 687125 ~ 760541 (-)
G148154 elf3,LOC107723034,LOC107656900,LOC107572362,LOC107569764,LOC107698310 non-coding upstream 240776 799650 ~ 801950 (-)
G148088 NA non-coding upstream 292281 851155 ~ 870764 (-)
G148172 LOC107570678,LOC107698304,LOC108413010,LOC105016818,LOC106565112 non-coding upstream 323053 881927 ~ 887759 (-)
G148175 NA non-coding upstream 325281 884155 ~ 884949 (-)
G148042 myhz2,LOC108417180,LOC106597527,LOC106596646,LOC107681327,LOC108261437 other downstream 49612 354912 ~ 432599 (-)
G148043 wu:fd14a01,myhz2,LOC107575389,LOC107681327,LOC108261508,LOC106593644,LOC107378336,LOC103152029,LOC106915643,LOC108443907,LOC106938366,LOC108417180,LOC107737926,LOC107083053,LOC108262146,LOC106597527,LOC108261437,LOC106598139 other downstream 88504 251814 ~ 393707 (-)
tmem240b NA other upstream 31153 590027 ~ 593649 (-)
G148116 NA other upstream 108630 667504 ~ 671420 (-)
G148119 NA other upstream 116102 674976 ~ 679897 (-)
srsf3b srsf3,srsf3b,LOC107569752,LOC107690536 other upstream 224977 783851 ~ 788211 (-)
arl8a arl8a,LOC107750681,LOC107722853,LOC107671521,LOC107569762,LOC105900530,LOC107575230 other upstream 268791 827665 ~ 833455 (-)

Expression


Co-expression Network