G148099


Basic Information

Item Value
gene id G148099
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 452244 ~ 453800 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU218848
CATGTCTTATAAAGGCtttaatacacaaacataccAAATTCTGCTGATCTTGAAAGACAAAAGAATGCATTTCAAGTCTGGTCCGCGGTCCTGATCTGCTGTCGTTGCATATCTGTGTGTTCGCTGCGAATCCAGTGGCGTACAAACAGAAACGTTAAATACTGACATAAACTCTCAACACTAGATGAACCGATGCagttaaaaggaataaaagggaAGGAGCAGTCCGTCTACAGCAGCAGGCACTTGCTGCTCTTCTTGCCCTTGCGGGCCTGCAGCGCCGCCCTGGTGGCCATCTCAAACACCTCCCGCACGCCGTCCTTGCTCTTGGCGGAGCACTCCATGTATCCGAAGGCACAGATGCGGTTGGCCATGTCTCGGCCCTCCTCGGGCTTGACCGGCGAGTGTGTTCGTCGTTGCGCAGGTCCTTCTTGTTGCCCACCAGGATGATGGGAACGTTGGGGCAGAAATGCTTGACCTCCGGAGTCCATTTCTCAGGGATGTTCTCtgtggggtcagaggtcaaaagTCAGCGGGCGCGAGCTGGGCTAGCGTGAGTGTAGCTAGGGCGAGACTCACCGAGGCTGTCGGGGCTGTCGATGGAGAAACACATGAGGATGACGTCGGTGTCGGGGTAAGAGAGCGGCCGCAGCCGGTCGTAGTCCTCCTGACCCGCCGTGTCCCACAGCGCCAGCTCCACCTGAAACACCACCACTAGAGTTAGCACTGCGCTAGTGTTAGCGTTAGCGTCGCTCGCTGCAGgcggatggacggacggacgcCGCTCACCTGCTTGCAATCCACCTCGATGTCGGCCACGTAGTTCTCGAAGACGGTGGGCACGTAGACCTCGGGGAACTGGTCTTTGCTGAAGACGATGAGCAGGCAGGTCTTCCCGCAGGCGCCGTCGCCCACGATCACCAGCTTCTTACGGATTGCCGCCATCTCTGCGGAGGGACACTTCACAGCGTTACATTCAGCCCAAACAACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218848 True 991 lncRNA 0.57 2 452244 453800

Neighbor

gene id symbol gene type direction distance location
LOC122328026 LOC107571577,LOC107719042,LOC107705002 coding downstream 4236 445497 ~ 448008 (-)
LOC122327827 LOC107575631,LOC107667978,LOC107741456,LOC107569100,LOC107741609,LOC107566978 coding downstream 327977 122594 ~ 124267 (-)
LOC122327957 tmem43,LOC107735555,LOC107719053 coding upstream 51 453851 ~ 459470 (-)
ndufaf3 ndufaf3 coding upstream 15645 469445 ~ 472125 (-)
si:ch1073-335m2.2 spen,LOC107719036,LOC107571566 coding upstream 41448 495248 ~ 514839 (-)
fblim1 LOC107577257 coding upstream 61893 515693 ~ 524814 (-)
slc25a34 slc25a34 coding upstream 74047 527847 ~ 531207 (-)
G148095 NA non-coding downstream 9576 441728 ~ 442668 (-)
G148053 NA non-coding downstream 14928 358077 ~ 437316 (-)
G148054 NA non-coding downstream 16836 357281 ~ 435408 (-)
G148067 NA non-coding downstream 27848 387596 ~ 424396 (-)
G148058 NA non-coding downstream 30919 396894 ~ 421325 (-)
G148081 NA non-coding upstream 19076 472876 ~ 473546 (-)
G148091 NA non-coding upstream 25695 479495 ~ 480720 (-)
G148089 NA non-coding upstream 28411 482211 ~ 558874 (-)
G148127 med20,LOC107581150 non-coding upstream 233325 687125 ~ 760541 (-)
G148154 elf3,LOC107723034,LOC107656900,LOC107572362,LOC107569764,LOC107698310 non-coding upstream 345850 799650 ~ 801950 (-)
G148042 myhz2,LOC108417180,LOC106597527,LOC106596646,LOC107681327,LOC108261437 other downstream 19645 354912 ~ 432599 (-)
G148043 wu:fd14a01,myhz2,LOC107575389,LOC107681327,LOC108261508,LOC106593644,LOC107378336,LOC103152029,LOC106915643,LOC108443907,LOC106938366,LOC108417180,LOC107737926,LOC107083053,LOC108262146,LOC106597527,LOC108261437,LOC106598139 other downstream 58537 251814 ~ 393707 (-)
tmem240b NA other upstream 136227 590027 ~ 593649 (-)
G148116 NA other upstream 213704 667504 ~ 671420 (-)
G148119 NA other upstream 221176 674976 ~ 679897 (-)
srsf3b srsf3,srsf3b,LOC107569752,LOC107690536 other upstream 330051 783851 ~ 788211 (-)
arl8a arl8a,LOC107750681,LOC107722853,LOC107671521,LOC107569762,LOC105900530,LOC107575230 other upstream 373865 827665 ~ 833455 (-)

Expression


Co-expression Network