LOC122328005


Basic Information

Item Value
gene id LOC122328005
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 959690 ~ 960903 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU218992
CTTTCGTCTACGAACAAACGAACTCATCTCAACATGGATGCTTCCCTCCAGGACTCTCACTGCCATTTGTCCAGGAACAGCAGGTATTGTGCGCCCCCTGGCGGTTACAGAGGGAGCGACGTTCACGCCGATCGCGCAGTACCGCTGTTTTTATACCCGACCCACGTCGAACAGCGAGTCTACGATAGATCGTACTGCGGCGGCGCGACGCTGCTCTCGTACCTGCCGCCGTTCCACGGGAGCTTCGGCGTTTACGAATGTCCCTTCGAGCCCGC
>XM_043223727.1
ACGAACTCATCTCAACATGGATGCTTCCCTCCAGGACTCTCACTGCCATTTGTCCAGGAACAGCAGGTATTGTGCGCCCCCTGGCGGTTACAGAGGGAGCGACGTTCACGCCGATCGCGCAGTACCGCTGTTTTTATACCCGACCCACGTCGAACAGCGAGTCTACGATAGATCGTACTGCGGCGGCGCGACGCTGCTCTCGTACCTGCCGCCGTTCCACGGGAGCTTCGGCGTTTACGAATGTCCCTTCGAGCCCGCCTTCATCCAGAAACGCAACGAGCGTGAAAGGCAGCGGGTGAAGTGCGTAAACCAGGGATACGCCAAACTACGCGACCACCTGCCCAACGGGAGCACGGAAAAACGGCTGAGCAAAGTGGAGACGCTCCGCGCGGCCATACGCTACATCAAGTACCTGCAGGatctggtggagaatgcgggcaggGCGGAGCAGAACAGAGGAGCGTCGCCACTTTCCGTTTCCGAATCGTCTTCTGAGGAGTCCGTCGGAAGTTAATATGCACAGAAGACATGGCTTTCAACGACTTTTGCCCTGCGACACCAAAACATACTGCTGGTTATCAGATATTAGCATGCGTTTCATTAATGCAAAACTACAAATCGTAATTCAAAAAGAGCAGCTCTCCGGAAAAGACGCAAataatttatacttatttttaattaattaatttaagtttatttaaaggggtcatataagGCAATTTctagttttcctttctctttggagtgttacaagcggTTCGTTTATAGATACAATCCCTAAAATTACAAAGACTCAAGAGTCAAacccaaagagatattcttcgTAAAAGgccgtttaaacacgcccccatgAATCTACGTCACTGTGTGGGAAGAATTGCATAACACCTCCTGTATGTTTGCGCAAAGAATAAGAAACTTTtttattctcgctgtagtgttgttgttgtggaGATGCTGCGTGTTTTCAAATATGGTCATGTTTCGGAATGatgagctttttaaaaatcGATGCATTTGAGAAAGACGCCTAGACATTAAACATATTGCATTACATCAAATACACAAGATAAGGGTATTTCTTTACACTGTTACGGTATGACTCCTTTATGATTGGTCTTCAATAAAGTAAATGAGTTGAATATGGAACAAGAGAGGCATTTTAGTTGGCTAGCGTGATTTAGTGTGTTTTCAGGC

Function

GO: NA

KEGG:

id description
K09067 ASCL; achaete-scute complex protein

RNA

RNA id representative length rna type GC content exon number start site end site
TU218992 False 275 lncRNA 0.59 1 960629 960903
XM_043223727.1 True 1197 mRNA 0.46 1 959690 960886

Neighbor

gene id symbol gene type direction distance location
cacna1sa cacna1sa,cacna1s,LOC107667627,LOC105900081,LOC106583479 coding downstream 609 941317 ~ 959081 (-)
kctd20 kctd20,LOC107572550,LOC107667635,LOC107726526 coding downstream 18668 936431 ~ 941022 (-)
cept1b cept1,cept1b,LOC107572554,LOC103025726,LOC108413012 coding downstream 33792 918418 ~ 925898 (-)
dram2b dram2,dram2b,LOC107726524,LOC107750688,LOC107572549 coding downstream 41503 913949 ~ 918187 (-)
cry4 cry4 coding downstream 55917 896228 ~ 903773 (-)
lamb3 lamb3,LOC101885031 coding upstream 39628 1000531 ~ 1011607 (-)
LOC122327917 LOC107710809,LOC107574827,LOC107667624,LOC107698297,LOC107575765,LOC107570670 coding upstream 61845 1022748 ~ 1030444 (-)
LOC122328113 LOC107749352,LOC107698282,LOC107599107,LOC107599106,LOC107574663,LOC107750708 coding upstream 77924 1038827 ~ 1048237 (-)
LOC122328117 NA coding upstream 180655 1141558 ~ 1152393 (-)
LOC122327988 NA coding upstream 462973 1423876 ~ 1427302 (-)
G148180 LOC107698300,LOC107570675,LOC107572545,LOC107667626 non-coding downstream 52161 906493 ~ 907529 (-)
G148172 LOC107570678,LOC107698304,LOC108413010,LOC105016818,LOC106565112 non-coding downstream 71931 881927 ~ 887759 (-)
G148175 NA non-coding downstream 74741 884155 ~ 884949 (-)
G148088 NA non-coding downstream 88926 851155 ~ 870764 (-)
G148154 elf3,LOC107723034,LOC107656900,LOC107572362,LOC107569764,LOC107698310 non-coding downstream 157740 799650 ~ 801950 (-)
G148195 NA non-coding upstream 6973 967876 ~ 968788 (-)
G148198 NA non-coding upstream 10045 970948 ~ 972143 (-)
LOC122328046 NA non-coding upstream 11654 972557 ~ 973444 (-)
G148477 NA non-coding upstream 57628 1018531 ~ 1019039 (-)
G148492 NA non-coding upstream 96284 1057187 ~ 1057397 (-)
arl8a arl8a,LOC107750681,LOC107722853,LOC107671521,LOC107569762,LOC105900530,LOC107575230 other downstream 126235 827665 ~ 833455 (-)
srsf3b srsf3,srsf3b,LOC107569752,LOC107690536 other downstream 171479 783851 ~ 788211 (-)
G148119 NA other downstream 279793 674976 ~ 679897 (-)
G148116 NA other downstream 288270 667504 ~ 671420 (-)
tmem240b NA other downstream 366041 590027 ~ 593649 (-)
G148573 NA other upstream 500970 1461873 ~ 1463176 (-)
LOC122327995 NA other upstream 619387 1580290 ~ 1625907 (-)
LOC122327997 NA other upstream 622112 1583015 ~ 1614538 (-)
G148574 NA other upstream 682807 1643710 ~ 1654340 (-)
G148613 NA other upstream 700282 1661185 ~ 1664627 (-)

Expression


Co-expression Network