LOC122327997


Basic Information

Item Value
gene id LOC122327997
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 1583015 ~ 1614538 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU219728
GATTTTGATTTGATGCTTTAGGTGTTGAAATGGCGTCAGAAGCAGGCAGACGTAGTCCACCATTTGATCGTCCTGACATGAGCGACCTGAGGGTCGTGCTTCTAGGAAAGAACAGATCAGAAAACAGACGGGTGGCAAAGGCTTTACTGGATACAATAGTGTTTGACGGCGAAGCTCCGTCTCATTCACTGCAGGACAGTGAGAAAATCACAGGAGTAACGCAGGACAGAAAGATCTCGGTCGTCATCAACACTCACCTGCTCCAGACGCATCTCTCCCATCAGCAGGTCACACACCGCGTGAGAGAGTGCGTGCGTCTGTCTGCTCCGGGACCGCAGGTGATCCTACTCGTCCTGCAGCGGCACGACTTCGGCG
>XM_043223719.1
TTacgtttttattaaacattagcCAACAGGAGAGGGTTGTTtacttaatttactttattaaatgacaatattttctTCGTGTagtctgttaaataatatttcacttagCGTGGCGTTCAACAGCAGGAAGAAACTAAACTTGGCACGTTTTTAATGTTCCTATGTGCAGACGTGTAATGTCGACACACTGTAGATCTTCTGGCGATGAGAGCAATCATATTTTCTCCAGTTATATGAACCTTCATCCATATCATCACTCAGTTCTTCCAACAAACGCTTTATAAcgtgtttatgtggttttctCTCTAACAGAAGCAGGCAGACGTAGTCCACCATTTGATCGTCCTGACATGAGCGACCTGAGGGTCGTGCTTCTAGGAAAGAACAGATCAGAAAACAGACGGGTGGCAAAGGCTTTACTGGATACAATAGTGTTTGACGGCGAAGCTCCGTCTCATTCACTGCAGGACAGTGAGAAAATCACAGGAGTAACGCAGGACAGAAAGATCTCGGTCGTCATCAACACTCACCTGCTCCAGACGCATCTCTCCCATCAGCAGGTCACACACCGCGTGAGAGAGTGCGTGCGTCTGTCTGCTCCGGGACCGCAGGTGATCCTACTCGTCCTGCAGCGGCACGACTTCGGCGAGGACGACAGACACCGAGCGGAAACCGTGCTGAAGCTCTTCGGTAAACGGGCCGTGAGACACACCATAGTGCTGACCACCGATGAAGAGGCACGCGGAGCAGTGGTCACTCCGAAGAGTAACGCCGTTCGTGATTTAATAACGGAGTGCGGAGGAGGGCACCTGCGCTTCGACGCGGTGAGAGCCGAGTTCTTCAAAAAGACCCAGGAGATACTCCTGAGAGAACGTGAAGAGTATCTCATCTGTGGCACGTTTGAGGATGAAGATCTCAAAGAGAGCACAGAATCACGAGCCGGAGGAGGTCTGTAAACGTCTTACGAATCTctgttttgtcctttttataGTAAGAGGTTTGTAGAGACCGGACATGATGGACGGCATGAGGGATAACGTCCGTTTATGATCAGGATTCGTTAATCCGCTgtcatttcccactgattttaggaatgaTTCACGGTTAGGGTTATATCCAGAAACCGTGTGTTCATGTGTACTGTTTTGTTGTATTACGGTGCATATATTCtattgttttagtaattattGATGTGAATCAATGTGAGACGGACCATACACACCGCGACATGCAAGACAAAGCTGTGCAAAGAGTAATTGGATAGAATAATTGTATTCATCATCTTAAAGCTAATCAATGtctctatttattcatttaacagacCTTTGGAGTTTAGGGACTGTGGTGATAGAAAATCCAGGAAGTAATTAAATTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU219728 False 375 TUCP 0.53 3 1583744 1614538
XM_043223719.1 True 1377 mRNA 0.45 2 1583015 1584544

Neighbor

gene id symbol gene type direction distance location
trnag-gcc_102 NA coding downstream 149500 1433445 ~ 1433515 (-)
trnai-aau_112 NA coding downstream 150085 1432857 ~ 1432930 (-)
LOC122327988 NA coding downstream 155713 1423876 ~ 1427302 (-)
LOC122328117 NA coding downstream 430622 1141558 ~ 1152393 (-)
LOC122328113 LOC107749352,LOC107698282,LOC107599107,LOC107599106,LOC107574663,LOC107750708 coding downstream 534778 1038827 ~ 1048237 (-)
LOC122327910 NA coding upstream 85360 1699898 ~ 1798685 (-)
ampd2a ampd2a,LOC107571172,LOC107662820,LOC107711379 coding upstream 300854 1915392 ~ 1928706 (-)
LOC122328124 NA coding upstream 345298 1959836 ~ 1963227 (-)
LOC122328100 NA coding upstream 498243 2112781 ~ 2114243 (-)
LOC122327992 NA coding upstream 506051 2120589 ~ 2123969 (-)
G148594 NA non-coding downstream 19049 1562575 ~ 1563966 (-)
G148533 NA non-coding downstream 61814 1219538 ~ 1521201 (-)
G148581 NA non-coding downstream 68633 1512012 ~ 1514382 (-)
LOC122328042 NA non-coding downstream 85424 1493235 ~ 1497591 (-)
LOC122328049 NA non-coding downstream 122130 1458838 ~ 1460885 (-)
G148600 LOC107690564,LOC107719048,LOC107564176,LOC107575580 non-coding upstream 10499 1625037 ~ 1880885 (-)
G148611 LOC107749352,LOC107701974,LOC107574085,LOC107698294,LOC107574907,LOC107574828,LOC107698282,LOC107750698 non-coding upstream 24301 1638839 ~ 1685959 (-)
G148619 NA non-coding upstream 102377 1716915 ~ 1785423 (-)
LOC122328045 NA non-coding upstream 103119 1717657 ~ 1724253 (-)
G148620 NA non-coding upstream 115092 1729630 ~ 1735880 (-)
G148573 NA other downstream 119839 1461873 ~ 1463176 (-)
LOC122328005 NA other downstream 622112 959690 ~ 960903 (-)
arl8a arl8a,LOC107750681,LOC107722853,LOC107671521,LOC107569762,LOC105900530,LOC107575230 other downstream 749560 827665 ~ 833455 (-)
srsf3b srsf3,srsf3b,LOC107569752,LOC107690536 other downstream 794804 783851 ~ 788211 (-)
G148119 NA other downstream 903118 674976 ~ 679897 (-)
G148574 NA other upstream 29172 1643710 ~ 1654340 (-)
G148613 NA other upstream 46647 1661185 ~ 1664627 (-)
LOC122328032 NA other upstream 499782 2114320 ~ 2116183 (-)
gpr35.2 NA other upstream 630093 2244631 ~ 2250561 (-)
LOC122327369 LOC107566359,LOC107727552,LOC107702633,LOC107698598,LOC107549380,LOC107733351,LOC107733325,LOC107566366,LOC107727554 other upstream 1436862 3051400 ~ 3065177 (-)

Expression


Co-expression Network