LOC122327995


Basic Information

Item Value
gene id LOC122327995
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 1580290 ~ 1625907 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU219731
AGTCGATGACTGTTACAGTAAAATAGAGGGGTTTCGGATACAGAGATCTTACAGTagtgtactgtaaataaatcaatacattcATTCACTTCATTCAGCTTCCTCTGCTAAACTGCATCACAGTATTATTAGCACTATCTTCTCCgttcacacagaaataaataagcgctgtttcagttcatttgtcGACGCTTGATTTACTTATACCGCGTTTTCTGCATGAGAACATGGTTAAATCTGTGCAAAATGACGGTGTAGAGTTTTGCGGAAAACGCTGAGCAAATCAGAACGAGTGTGCAAACATCTGAAATGTGTTAAACGTTCTGAGAAATGGGTCTTGAAACCGTCGAccgtgctacttatgactgcttttgagCTCCACACATTTACAGTTACTAGTAAATTACAAGAAATTACAGCGTTTGCAAAACAAGTCCTGTCTTTCACATTATCTCTTCCAAACCGGAATCTCGGTCTGCCGCGGCGCCACGGAGCAGACGGTATACGGCCCGTGGATGGGATTGCAAACACTCTTCGGCTTCAGGCAGAGAAAGCAGAACTCCAGCTTGCAGCGCTTACACATGAGGTTCTTACAAGCGAAGCCGTTGTGCTCCAGAAGAAGACCGCAGGTCGGACAGGCCCGGCAGACCGAGATTCCGGTTTGGAAGAGATAATGTGAAAGACAGGACTTGTTTTGCAAACACTGTAATTTCTTGTAATTTACTAGTAACTGTAAATGTGTGGAGctcaaaagcagtcataagtagcacggTCGACGGTTTCAAGACCCATTTCTCAGAACGTTTAACACATTTCAGATGTTTGCACACTCGTTCTGATTTGCTCAGCGTTTTCCTCAAAACTCTACACCGTCATTTTGCACAGATTTAACCATGTTCTCATGCAGAAAACGCGGTATAAGTAAATCAAGCGTCgacaaatgaactgaaacagcgcttatttatttctgtgtgaacGGAGAAGATAGTGCTAATAATACTGTGATGCAGTTTAGCAGAGGAAGCTGAATGAAGTGAATgaatgtattgatttatttacagtacactACTGTAAGATCTCTGTATCCGAAACCCCTCTATTTTACTGTAACAGTCATCGACTAGCAAAAAGGATTCCTGTTTCCCTAAAGGTTTCAGTGACAGTGTTTTGACTGAATCAGTGTAAGTGTCTGTGGGGGGTTTGCGGCCAAACTTTGATTTTGACTGAAGATAATATGCTTTTGGTTTTTACCTGGAAGTTAGAGGTTTGTGTAAGTTGTCGTATAGTTTTGTGATTGTGTTTGCAGTTTTGAGAAATTGCCAAATTGTTTGATGCGTTGTGTGTTAGCAGTCGAGACAAACTCTAAgtatgttccatgaagatatttagtaaatttcctaccttaaatatatcaaaacttttttgattagtaatgttcatcgctaagaacttcatttggacaacttgaAGAGGGATTTTCTcaggattaattttttttgatccCTCAGATTCCACattttctaatagttgtatctcagagaAATATTATCCgatcataacaaaccagacatcagtgcAGAGATGATTTTTTCAGGTTTAGACAAAATGACGCTTATGACTGGTTTCATATTCCAGGGTCGAATATATCTAGC
>XM_043223717.1
TTTGGTAGCCGTTGGGTCCTATgccagtgtgtatatatactgtttttagACACAACTGTTTCTGACGATCTGTGTTTGACTCACAGCTTTAGATGATGACCCCAGTATTCAGAGAGTAGAGATGTCTTGTGGTCATGCGGTGACCCCAAAATCCCTGACCGGCTGGTGTCGCAGTCTGCTGGACCAGGGTCAGTATAAATTTTATTGCCCAGCTTTCAAAGACGGGACAGAGAAATGTAATGTGGAGTGGCCGTTTTCGGAGGTCAAGAGGCTGCTCAGCGATTCAGAGCAGGCTCACTTCGAGGAGAAGGTGTCTCTTCTGGCAGCAGCTGAGCACTGCGACTTAAGATCATGTCCGAGCTGTGGGTCCTACGTGGAGCGAGAAGACCTGAGTAACCTCTGCGTGAGATGCACCATCTGTACATCTGTGAAAAACAAGACCTACCAGTTCTGCTGGCAGTGTCTGAGAGAATGGAGAGGAGCAGCTGGTCATGCTCTCCGCTGCGGTCATGAAGACTGCGTCAACCCAGACGTCGACAAGCTAGCAAAGTGTACAGATATGAGGCTGTCTTACGTGGAGAACGTGGAGTGTCCGGCCATCCGGGCCTGTCCGACCTGCGGTCTTCTTCTGGAGCACAACGGCTTCGCTTGTAAGAACCTCATGTGTAAGCGCTGCAAGCTGGAGTTCTGCTTTCTTTGCCTGAAGCCGAAGAGTGTTTGCAATCCCATCCACGGACCGTATACCGTCTGCTCCGTGGCGCTGCGGCAGACCGAGATTCCGGTTTGGAAGAGATAATGTGAAAGACAGGACTTGTTTTGCAAACACTGTAATTTCTTGTAATTTACTAGTAACTGTAAATGTGTGGAGctcaaaagcagtcataagtagcacggTCGACGGTTTCAAGACCCATTTCTCAGAACGTTTAACACATTTCAGATGTTTGCACACTCGTTCTGATTTGCTCAGCGTTTTCCTCAAAACTCTACACCGTCATTTTGCACAGATTTAACCATGTTCTCATGCAGAAAACGCGGTATAAGTAAATCAAGCGTCgacaaatgaactgaaacagcgcttatttatttctgtgtgaacGGAGAAGATAGTGCTAATAATACTGTGATGCAGTTTAGCAGAGGAAGCTGAATGAAGTGAATgaatgtattgatttatttacagtacactACTGTAAGATCTCTGTATCCGAAACCCCTCTATTTTACTGTAACAGTCATCGACTAGCAAAAAGGATTCCTGTTTCCCTAAAGGTTTCAGTGACAGTGTTTTGACTGAATCAGTGTAAGTGTCTGTGGGGGGTTTGCGGCCAAACTTTGATTTTGACTGAAGATAATATGCTTTTGGTTTTTACCTGGAAGTTAGAGGTTTGTGTAAGTTGTCGTATAGTTTTGTGATTGTGTTTGCAGTTTTGAGAAATTGCCAAATTGTTTGATGCGTTGTGTGTTAGCAGTCGAGACAAACTCTAAgtatgttccatgaagatatttagtaaatttcctaccttaaatatatcaaaacttttttgattagtaatgttcatcgctaagaacttcatttggacaacttgaAGAGGGATTTTCTcaggattaattttttttgatccCTCAGATTCCACattttctaatagttgtatctcagagaAATATTATCCgatcataacaaaccagacatcagtgcAGAGATGATTTTTTCAGGTTTAGACAAAATGACGCTTATGACTGGTTTCATATTCCAGGGTCGAATATATCTAGCTCCTTTTgttactataaaaatgtttcagttataatgttaatacttgtgaaaaaatatgtttttatttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU219731 False 1652 lncRNA 0.40 2 1580358 1625907
XM_043223717.1 True 1842 mRNA 0.43 3 1580290 1582417

Neighbor

gene id symbol gene type direction distance location
trnag-gcc_102 NA coding downstream 146775 1433445 ~ 1433515 (-)
trnai-aau_112 NA coding downstream 147360 1432857 ~ 1432930 (-)
LOC122327988 NA coding downstream 152988 1423876 ~ 1427302 (-)
LOC122328117 NA coding downstream 427897 1141558 ~ 1152393 (-)
LOC122328113 LOC107749352,LOC107698282,LOC107599107,LOC107599106,LOC107574663,LOC107750708 coding downstream 532053 1038827 ~ 1048237 (-)
LOC122327910 NA coding upstream 73991 1699898 ~ 1798685 (-)
ampd2a ampd2a,LOC107571172,LOC107662820,LOC107711379 coding upstream 289485 1915392 ~ 1928706 (-)
LOC122328124 NA coding upstream 333929 1959836 ~ 1963227 (-)
LOC122328100 NA coding upstream 486874 2112781 ~ 2114243 (-)
LOC122327992 NA coding upstream 494682 2120589 ~ 2123969 (-)
G148594 NA non-coding downstream 16324 1562575 ~ 1563966 (-)
G148533 NA non-coding downstream 59089 1219538 ~ 1521201 (-)
G148581 NA non-coding downstream 65908 1512012 ~ 1514382 (-)
LOC122328042 NA non-coding downstream 82699 1493235 ~ 1497591 (-)
LOC122328049 NA non-coding downstream 119405 1458838 ~ 1460885 (-)
G148611 LOC107749352,LOC107701974,LOC107574085,LOC107698294,LOC107574907,LOC107574828,LOC107698282,LOC107750698 non-coding upstream 12932 1638839 ~ 1685959 (-)
G148619 NA non-coding upstream 91008 1716915 ~ 1785423 (-)
LOC122328045 NA non-coding upstream 91750 1717657 ~ 1724253 (-)
G148620 NA non-coding upstream 103723 1729630 ~ 1735880 (-)
G148532 NA non-coding upstream 150968 1776875 ~ 1778772 (-)
G148573 NA other downstream 117114 1461873 ~ 1463176 (-)
LOC122328005 NA other downstream 619387 959690 ~ 960903 (-)
arl8a arl8a,LOC107750681,LOC107722853,LOC107671521,LOC107569762,LOC105900530,LOC107575230 other downstream 746835 827665 ~ 833455 (-)
srsf3b srsf3,srsf3b,LOC107569752,LOC107690536 other downstream 792079 783851 ~ 788211 (-)
G148119 NA other downstream 900393 674976 ~ 679897 (-)
G148574 NA other upstream 17803 1643710 ~ 1654340 (-)
G148613 NA other upstream 35278 1661185 ~ 1664627 (-)
LOC122328032 NA other upstream 488413 2114320 ~ 2116183 (-)
gpr35.2 NA other upstream 618724 2244631 ~ 2250561 (-)
LOC122327369 LOC107566359,LOC107727552,LOC107702633,LOC107698598,LOC107549380,LOC107733351,LOC107733325,LOC107566366,LOC107727554 other upstream 1425493 3051400 ~ 3065177 (-)

Expression


Co-expression Network