G149592 (LOC107729908,LOC107712186,LOC107702610,LOC107702613)


Basic Information

Item Value
gene id G149592
gene name LOC107729908,LOC107712186,LOC107702610,LOC107702613
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 4625597 ~ 4625905 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU221323
TCTGTTGTACCTGAACACGTGTGACAGATCTGACTGATGTTcagatgtgtggtctggtttctgatggggttgttgatcacacagctgtaggtgtttttatcctgatattccacctccagaggtagagagagactgatgctgagatcagacacactgatgctggacaataaactgtttcctttgtaccaggagagagtcacatgacccacGTTCACCACCGAACACAACAACGAACAatttgatgaagatgaagatgatgatgaagaacagTTTGAAGAGTTACTGCTGATGACAGGAACAGGCAGACGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107729908

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221323 True 309 lncRNA 0.45 1 4625597 4625905

Neighbor

gene id symbol gene type direction distance location
LOC122328157 LOC107582254 coding downstream 8820 4601851 ~ 4616777 (-)
LOC122328155 NA coding downstream 41531 4581101 ~ 4584066 (-)
LOC122328153 NA coding downstream 76749 4547909 ~ 4548848 (-)
LOC122327444 NA coding downstream 99677 4521563 ~ 4525920 (-)
LOC122327512 NA coding downstream 114121 4507921 ~ 4511476 (-)
LOC122327436 NA coding upstream 2667 4628572 ~ 4635227 (-)
LOC122327393 NA coding upstream 23668 4649573 ~ 4678717 (-)
LOC122327345 NA coding upstream 65189 4691094 ~ 4697295 (-)
LOC122327429 NA coding upstream 76058 4701963 ~ 4705859 (-)
LOC122327323 NA coding upstream 112477 4738382 ~ 4745957 (-)
G149587 NA non-coding downstream 10712 4614307 ~ 4614885 (-)
G149586 NA non-coding downstream 14324 4610930 ~ 4611273 (-)
G149568 NA non-coding downstream 80854 4537838 ~ 4544743 (-)
G149566 LOC107575724,LOC107707331,LOC107694500 non-coding downstream 90124 4533704 ~ 4535473 (-)
LOC122327600 NA non-coding downstream 106404 4514528 ~ 4519193 (-)
G149598 NA non-coding upstream 36170 4662075 ~ 4671770 (-)
G149594 NA non-coding upstream 54014 4679919 ~ 4681076 (-)
G149955 LOC107698556 non-coding upstream 306544 4932449 ~ 5041927 (-)
G149956 NA non-coding upstream 313530 4939435 ~ 4939839 (-)
LOC122327586 NA non-coding upstream 331496 4957401 ~ 4965773 (-)
LOC122328156 NA other downstream 37175 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 138672 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 192097 4428805 ~ 4433500 (-)
LOC122327462 LOC107741386,LOC107698560 other downstream 343829 4272551 ~ 4281768 (-)
G149491 NA other downstream 466616 4156492 ~ 4158981 (-)
LOC122327545 NA other upstream 81969 4707874 ~ 4736860 (-)
LOC122327354 NA other upstream 520021 5145926 ~ 5153856 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 901325 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 912651 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 1012233 5638138 ~ 5652159 (-)

Expression


Co-expression Network