G150025 (LOC107683790,LOC107563976,LOC107744761)


Basic Information

Item Value
gene id G150025
gene name LOC107683790,LOC107563976,LOC107744761
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5218835 ~ 5226874 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU222016
GTCTCTCTAATTTGCTTGTACTATTCTCCAGTCCAGTGCAAAGCTGCTTTACTCCTGAATCCTCAAGATTATTATTGCTCATATTCAGCTCTATCAGTTTGTTATCTGATCCAAGAGCTTTAGCCAAATTTGAACAGCTCTTATCTGTTAAGCCACAATCATTTAGCCTAAAACCCCCCCcccacaaaatataaaatattaatgagtAAAACTGTCGTATTGCTCAATTTAAGTTAATGATTAAGAACTATAGAGATATCTTGATGCAAAAACATGACTTGTATTACTTACAGAGCTCTTTTGGAGTTTTTTAAAACTTCTAATAGCCTAAAGAGACACTCGTCTGATTTCTTGAAATTCTGAAGCTCAAACTCCTCCATCTCTTCCTCTGATGTTAACAAAACAAAGGCCACAGCAGACCATTGTGCAGGTGAAAGATCAGCAGATGAAAGACTTCCTTCTCTAAGTTGAGTCTGAATCTCTTTCACCAGAGTTTGATCATTTAGTTCATTCAGACAGTAGAACAAATTGATGGATCTCTCTGGAGATAGATTATCCTCTAGTTTCTGCTTGATGTACTGAACTATTTCCTTTTCGCTCTGGTCattgtcatcttttttttttaacagaccTTGTAAGAGTGGACGATTGATCTGGAGTGATAAACCAAGAAGGAAGCGAAGGAAAAGGTCCAGGTGACCAGTTTCACTCTCGAGTGCTTTGTCCACTGCAGTCTTGAGCAAATCAATCatggttttatttctgttttcttgttCTGTAgactcacaaacaaacacacttttctCGTTGATGTCTAGAAACAGATGTGCATAAAGGGCTGCAACAAACTCTTGAATGCTCAAGTGAACGAAGCAGAAAGTGGTACCAAGAATTATTCCTCTTTCCTCCTTAAAGATCTGATTACACATCCCTGAGTACACCGATGCCTTATCTGCATCAATACCACAGTCTTCCAGATCTTTGTCATAAAAGAGCAGATTATTTCTTTGCAACTGATGAAATGCCAGTTTACCCAGAGAAAGCATGGCATTTTTATCCCAAGAAACATCTGGTGTATATTTTCCTTCATACTTTCGTCTACTCTGCAGGATCTGAAAgcgaaaaaaatgtgtgtacatttgtgtCAGAGTCTTGGGAGTGTCTTCAATGTTTGATtcctgctgtgttttggatgcGTCAttagtttgattgtttttgagatcatttattttctcctcCAAAATGTTCTGGAGAACAGTGGCTGaaatccagcagaagactgggatgtAGCACATGATAAAAAGACTCTTTGATTGTTTAACATTATCAATAATTTTGTTGGCCAGATCCACATCTGTGAATCTTTTTCTGAAGTACTCCACTTTTTGTGCATCATTAAAACCTTGTACTTCAGTGACGCGGTCAATACAATCGGGAGGAATTTTAATGGCAGCTGCTGGTCTGGTGGTGATCCAGATCTTTGCAGAAGGAAGCAGATTTCCCTTGATGAGGTTTGTGAGGAGAACATCCAGTGAGACTGGTAAAGATACATCACGGCAAGTCTCATTACTCTCAAAGTTCAGAGGAAGACGACATTCATCCAAACCATCAAGGATGAACAGTAATGTAAATTTATCACTTCTTGAAAGGTTCAGACCTTTTATCTCTGGGAAAAACTGACGTATAAGACCTGTCAAGCTTTGGGTTTCTTTCTCCTTTAAGTTCATTTCTCTAAAAGCAAGAGGaaatatgaaagtaaaatcCTCATTTTCTTTACCGTCAGCCCAATCCACAATAAACTTTTGCACAGAGATGGATTTTCCGATGCCAGCAACTCCTTTTGTCATTacagttctgATCTGCTTCTCTTGTTCAGGTGCTTCAAACAAATTTTTGCATTCAACTGGAATCTCTTCTGATTCATGACGCCTGTCAGCATTCTGAACATGTATTACTTCATGTTTTGTATTGACTTGTTTACTAACACCCAGTGTCATGTAAAGACCTGTGtagattttattcaaaagcttGGAGTCACCATGCTTCGCAATTCCTTCAGATACCGATTCATGCTTCTTCTTCAGGTTTGATTTTAGTGGTCGCTGATGAATGAGGACC

Function

NR:

description
PREDICTED: uncharacterized protein LOC107683790

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222016 True 2118 lncRNA 0.38 2 5218835 5226874

Neighbor

gene id symbol gene type direction distance location
LOC122327503 LOC107575528,LOC107709688,LOC107741386,LOC107568440 coding downstream 34549 5182941 ~ 5184286 (-)
LOC122327332 NA coding downstream 95584 5114167 ~ 5123251 (-)
LOC122327498 LOC107740712,LOC107755677 coding downstream 108174 5108760 ~ 5110661 (-)
LOC122328166 NA coding downstream 110284 5107353 ~ 5108551 (-)
LOC122327526 NA coding downstream 132323 5084840 ~ 5086512 (-)
LOC122327497 LOC107659626 coding upstream 52604 5279478 ~ 5280923 (-)
LOC122327315 NA coding upstream 100412 5327286 ~ 5341934 (-)
LOC122327308 NA coding upstream 109850 5336724 ~ 5351569 (-)
LOC122327319 NA coding upstream 124341 5351215 ~ 5355113 (-)
LOC122327304 LOC107570597,LOC107658377,LOC107711545 coding upstream 128671 5355545 ~ 5373808 (-)
G150017 NA non-coding downstream 14828 5201322 ~ 5204007 (-)
G150008 NA non-coding downstream 37583 5177689 ~ 5181252 (-)
LOC122327581 NA non-coding downstream 51493 5161372 ~ 5167342 (-)
G150000 NA non-coding downstream 76656 5141247 ~ 5142179 (-)
G149962 NA non-coding downstream 215146 4991610 ~ 5003689 (-)
G150033 NA non-coding upstream 5297 5232171 ~ 5235460 (-)
G150060 NA non-coding upstream 46683 5273557 ~ 5276742 (-)
G150071 cacna2d2b,LOC107558272,LOC107653164,LOC107720977,LOC107655410 non-coding upstream 75986 5302860 ~ 5303238 (-)
LOC122327610 NA non-coding upstream 81376 5308250 ~ 5309890 (-)
G150086 LOC107586973,LOC107676140,LOC107698552,LOC107712186,LOC107658401,LOC107676139,LOC107681664 non-coding upstream 191582 5418456 ~ 5470508 (-)
LOC122327354 NA other downstream 64979 5145926 ~ 5153856 (-)
LOC122327545 NA other downstream 481975 4707874 ~ 4736860 (-)
LOC122328156 NA other downstream 630413 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 731910 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 785335 4428805 ~ 4433500 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 300356 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 311682 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 411264 5638138 ~ 5652159 (-)
nol8 LOC107586918 other upstream 434867 5661741 ~ 5672809 (-)
LOC122327537 NA other upstream 531132 5758006 ~ 5763982 (-)

Expression


Co-expression Network