G150060


Basic Information

Item Value
gene id G150060
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5273557 ~ 5276742 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU222064
CCACTCACCACTAACTGCAATACGAAATTTCTTATGTAAGGCCGTGCTGCTGTTGTAGATCTCCAAATCATAGTCTCCAGAGTGTTCGGTTTGGACGTTTCTGATGGTGAGGTCGCCAGTGTTTACATTTAGTTTGATCATGTCTTTCCATTTAGCATCAGCATCGCCATTTAATCCAGCAATGATGGTGCCTCGATCTCCAAACTTCCACAGTATCTGAtcatctttttgtattttagtaacACCAGTCTGTAGAGTGACAGTATCTCCCTCCATCAGTGACACTGACTGCACTTCATCTGTCACAGCAACAAATACAAGATTAAGTTAAGAGTGCTTTTAGTGATTACCACACTTGTACAAATACTTGTTAGTAAATCACTAAAAATTACGGTACTGTGCGGCTGGATTGCAGGCTATTAACCCTCTCTTCTTACCTATTTGTCTTCTGAAATGGCTttttcaacaagaaaaaaaaaaaaaaaaaaaatcaaagaaaccaaccaaaaaaatccaaaaagtaGGTAGTGCCACAATTAGTTCAGGTacttttaaaacagttaaaagttAGTTTTAAAGTTCTATTCTGCCTGATAGTATCGTATTACAATTTTTCTGTTACAATTTCTGCTCAGAATAAGCACACTGTAGTCTGAATGTCTTCGccatttgctgtttttattgtttaacaatttatttcacAGGGGAAAAATCCAAATGAACCTATAAAGGTGACACCTGATCATTTCAAACAAGCACGGGTGCACCAAGCGATTTCTGAGAAACACTGACTATAGTCTTAATTGaactaaattaattcattaacacCTCCGTTGCTCCTCCCCCAAAATGCACtgtcttaaatataaattgaaaaacaaaatagttaAAAAGAGTTTTCACACAAGCTCCAGACACATGAGACTCTATACTTACCTATTTATAACCAAGGTTGGGCAGTAACTAGTTACAGTAACAATTACTTTTTGCAGTAATTGCAGTGTAACTTCTTACTAATAAAATTTCCGTAATAATTTTGCTGTTACTATCCCTAAACCACTAGCTCATTACCTAGTTACCTTTACTAGTTACATCATCTCCTACTGATTTGAAATCCAATAAAacctatatttattttcataacttaAGTTATGGCATTCGTTTTCTCTGGCGTTGCTCACCTTTATCCCTCCGATCCAgatataaattgtatttgacGATGAAACATCTTCCTATATACTTATGTGATtgatttttgataaaaatacatcatgAATTATAATCGTATATGGTAAACAGAAAAATGATAGCTACACAATTCATTGAAATAATACAACACTTTTTCTTAAACGTCTCTATCAGTTAAGCGTTTTCAATAACTTCTAAAATGTTCTAAGAATATATGTCTGCCTTGTCATTTGGCCAAAATTAACATAGGATCGCCGTTTGTaggaaatatacataaatacagcttttctgaaagaaaagtaaaagtgctttgtttaca

Function

GO:

id name namespace
GO:0022624 proteasome accessory complex cellular_component
GO:0008537 proteasome activator complex cellular_component
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG:

id description
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
TU222064 True 1507 lncRNA 0.34 2 5273557 5276742

Neighbor

gene id symbol gene type direction distance location
LOC122327503 LOC107575528,LOC107709688,LOC107741386,LOC107568440 coding downstream 89271 5182941 ~ 5184286 (-)
LOC122327332 NA coding downstream 150306 5114167 ~ 5123251 (-)
LOC122327498 LOC107740712,LOC107755677 coding downstream 162896 5108760 ~ 5110661 (-)
LOC122328166 NA coding downstream 165006 5107353 ~ 5108551 (-)
LOC122327526 NA coding downstream 187045 5084840 ~ 5086512 (-)
LOC122327497 LOC107659626 coding upstream 2736 5279478 ~ 5280923 (-)
LOC122327315 NA coding upstream 50544 5327286 ~ 5341934 (-)
LOC122327308 NA coding upstream 59982 5336724 ~ 5351569 (-)
LOC122327319 NA coding upstream 74473 5351215 ~ 5355113 (-)
LOC122327304 LOC107570597,LOC107658377,LOC107711545 coding upstream 78803 5355545 ~ 5373808 (-)
G150033 NA non-coding downstream 38097 5232171 ~ 5235460 (-)
G150025 LOC107683790,LOC107563976,LOC107744761 non-coding downstream 46683 5218835 ~ 5226874 (-)
G150017 NA non-coding downstream 69550 5201322 ~ 5204007 (-)
G150008 NA non-coding downstream 92305 5177689 ~ 5181252 (-)
LOC122327581 NA non-coding downstream 106215 5161372 ~ 5167342 (-)
G150071 cacna2d2b,LOC107558272,LOC107653164,LOC107720977,LOC107655410 non-coding upstream 26118 5302860 ~ 5303238 (-)
LOC122327610 NA non-coding upstream 31508 5308250 ~ 5309890 (-)
G150086 LOC107586973,LOC107676140,LOC107698552,LOC107712186,LOC107658401,LOC107676139,LOC107681664 non-coding upstream 141714 5418456 ~ 5470508 (-)
G150093 NA non-coding upstream 174694 5451436 ~ 5454332 (-)
G150092 LOC107658400 non-coding upstream 221199 5497941 ~ 5506152 (-)
LOC122327354 NA other downstream 119701 5145926 ~ 5153856 (-)
LOC122327545 NA other downstream 536697 4707874 ~ 4736860 (-)
LOC122328156 NA other downstream 685135 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 786632 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 840057 4428805 ~ 4433500 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 250488 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 261814 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 361396 5638138 ~ 5652159 (-)
nol8 LOC107586918 other upstream 384999 5661741 ~ 5672809 (-)
LOC122327537 NA other upstream 481264 5758006 ~ 5763982 (-)

Expression


Co-expression Network