G150093


Basic Information

Item Value
gene id G150093
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5451436 ~ 5454332 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU222122
TGAATCTCTTGTATAGGGTTTCTCTGTTGCTGATGATCTGTAGTTtataaagtccagagtctgtggttctgatgtttctgatggtcagagatccagtctgacTGTCCATCTGCAGTCTGTCTCCAAATATATGAGTACTATCCTCTGTATAGACGTTCTGTCTGTGAATTTCAGCGATACGAGTCTCTTTAGATCCAAACATCCACAGTATCTGATCATCTGTCTGTACTTCAGTAACATCAGTGTTTAGATGGACAGAATCTCCCTCAGTCACTGATACTGACTTCACTGCATCTGTATCAGCACCAAAAGCACCTGAAGAAAAGCAGTTTATCAAGCACATTAAAAACCTGTTTAAGTTCCACTGGTCTTAAGGCAAGACACTtcatggcaaaaaaacaaacagaaaaaaaaactgaaatgcaccagactattatatatatatatgcatgtgtgtgtgtaatataatttaCCAATTCTTAAAACAAAGGAATTTAAGACTTACCAGTCGTAAGCAAAAGGCATAGGCAGAAGACAGATGCGCTGTGAATCATTTTTCGGACTTCATAAACACCCAACAATAGGCTAAACATGGCGCGAAAACGGGTGAAAAAGTGCGTCTATCCGTTCCTCTGCTTACGAAAAAAGTTCATTCTTAGATGTAGTCCGCGCGTTCCGTCACCTCTTTAGTAACAGAATAGAAATAATACAACTAGATGAAGATGGAAAGAAGTGCCGTTAGGTCTGAACTTTCGGTACACACGCCCTCGCGCGCACGCGcgctcacgctcacacacacacacacacacacacacaaccacCCCTCACTCCTCTCTTTGGCAAGctacaaaattaatattcagcTGTAAATCGTCTCTGCTAAGTCAATCAGCGGTAAATCtcctattattttaaaataaacatttttattaatagtttttagtCCGTCAATTTGGAAATTAGTTTGGCCAATAAATATTACtgataataatagtataaatataatgttagcATAAATATAGTTTGCTTTGTTCACATTAAAGCAATGCACCCTCCCTCCTCTGCGTCATAATGAGTTATGCAGAGGAAagtaaaaaacctttttaggAGCAAAGTTTTATCTAGCAAGCTCTCCTCCTcctacatacataaacacattctTGCAAGGACTGTACAAAATAAGAGCTCCATGTACTCTACAGATCCAAATGGTAGAATATCTAAGACACGTTTCACACAGCCATGTCCTGATAATGTCCAGCGATGCTATTATTTTAACTGATTCGTTTAGGAAAAGTACTCCGTACTTTCTTCTCAAGTTACTTATACGACTGATGATCTTCCAGCCGGAGTTGAATCACATTTAATAGCGAACATTGTGTTAcgttgttttcttctttttccggAACCAACGTGCAAACCACAGACTTAAATAGCATCAGGAAGCTCTCAGGTAAGCACTCATCACATAAATTCAGCCGCTGTTCACCCTGTACACACATACTGCAGGAAAACGGCAGTATGCTATTTCAGACAGCTCTAACACATGACCCCTAAACCACCGAGAAGCTGCAGCAGCCTCGTTCCTTTCATGTAACCTCtagaagagttttttttctgttggtttCTGGTAGGCCTGAACTCAAATTAGTGCCACCATCAGGTCAAAAAGTGTCTATTTACTTTCTGTAGTTTAAAGCACGATGCTTTTCCCAAGCTCCTAATCTCGaagcgcccctattatggattttggaaaatgtgcttttatgctctaagtgaataaaaacatcctgcaaagtttttactttttaagtgTGCTgtgtaaaacaatttttttttaaaagactcaactctgaatcattgaaggTAAAAATGCGAATaaggtaaaaatgtatattataagaAAACGCCACAAACACTGCTCTCATTTCAAGCTGATCTTTTACCTCTACACGTATTTCAAGTAAGCATTCTAGTTCTCTGAAGCGTTCTCACTACATTTGTTTTCACTGAAGCACAAAGTGTGGTATGAGCAAAGCACAAAATACACCTTACAAGTCCAAGCAGTTAATCATATAGTGCCAGTGCTGCAGCAACTCCATATGTTTGCCATACAAGACTTTGCgctttttaaatgcacagaagGCAAAAACATAAAGATGCACTGGCTTTTGGCCACGTGATTCGcgtattttttaaatcagctggGAAAAAAGGTGTTCCTTATGCTGAAACAGCTAGTTTATGCAAACAAGGGGCAGCTGCTATCCAATCAACTGGCAGCTGCCTTTTATTTTGGTACTTCCTCCAATTCATGTACTAATGTACCAATTTAGAGTCTGCGTCTTTCAAAGGCAGCAAAGGTCAAACCACACATCGGTGAATCCCTTTTCATGATAATTACATTACACGATCGAAAAAAGAAGCTGTATGTAGTTTTACACTCTCTGCAGCTTCACGCTTAagttaaataaatcattctgaGAATGTTCTCGCTCttaacatttgcatgtttactCTCCGCAAAGAGTATTTTCTTACATCagctccattttttttttatctacctCCTCTGTGTAGGTGTAAAGTTAGCCTTCCTCCACATCCTTTAGCCAAAAATCAGCAGAGCTTGCTATCTAATGTGTAATGCTTATCTCATTCTCTTATGGGAGCTGAATCAGGATCCATGATGGATAGAAAAGCTTCGTCAGTTAGCTCATTTAATTGGCGCATGAATTGGCACAATCACCTGCAGCAGTTATTGAACGTTGCCCTTTTACATTTTAGGCTCGTCCGACTCAGTGGTCTATTAACATCAAtgtcaaaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222122 True 2829 lncRNA 0.39 2 5451436 5454332

Neighbor

gene id symbol gene type direction distance location
LOC122327381 NA coding downstream 17293 5430855 ~ 5434143 (-)
LOC122327375 LOC107570603,LOC107690762 coding downstream 72549 5373452 ~ 5378887 (-)
LOC122327304 LOC107570597,LOC107658377,LOC107711545 coding downstream 77628 5355545 ~ 5373808 (-)
LOC122327319 NA coding downstream 96323 5351215 ~ 5355113 (-)
LOC122327308 NA coding downstream 99867 5336724 ~ 5351569 (-)
LOC122328170 NA coding upstream 17604 5471936 ~ 5480859 (-)
LOC122328171 NA coding upstream 27376 5481708 ~ 5490754 (-)
LOC122327326 NA coding upstream 37758 5492090 ~ 5496079 (-)
LOC122327491 NA coding upstream 68906 5523238 ~ 5525432 (-)
rdh5 rdh5,LOC107573570,LOC107653177,LOC107586996,LOC107745400 coding upstream 78864 5533196 ~ 5536573 (-)
LOC122327610 NA non-coding downstream 141546 5308250 ~ 5309890 (-)
G150071 cacna2d2b,LOC107558272,LOC107653164,LOC107720977,LOC107655410 non-coding downstream 148198 5302860 ~ 5303238 (-)
G150060 NA non-coding downstream 174694 5273557 ~ 5276742 (-)
G150033 NA non-coding downstream 215976 5232171 ~ 5235460 (-)
G150025 LOC107683790,LOC107563976,LOC107744761 non-coding downstream 224562 5218835 ~ 5226874 (-)
G150092 LOC107658400 non-coding upstream 43609 5497941 ~ 5506152 (-)
G150121 NA non-coding upstream 54238 5508570 ~ 5512967 (-)
G150161 tbc1d20,LOC107658381,LOC107586998,LOC107573569,LOC107653176,LOC107720987 non-coding upstream 90936 5545268 ~ 5545768 (-)
G150125 LOC107586915,LOC107745408,LOC107658396,LOC107721006,LOC107593072 non-coding upstream 125138 5579470 ~ 5583041 (-)
G150184 NA non-coding upstream 149825 5604157 ~ 5604418 (-)
LOC122327354 NA other downstream 297580 5145926 ~ 5153856 (-)
LOC122327545 NA other downstream 714576 4707874 ~ 4736860 (-)
LOC122328156 NA other downstream 863014 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 964511 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 1017936 4428805 ~ 4433500 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 72898 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 84224 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 183806 5638138 ~ 5652159 (-)
nol8 LOC107586918 other upstream 207409 5661741 ~ 5672809 (-)
LOC122327537 NA other upstream 303674 5758006 ~ 5763982 (-)

Expression


Co-expression Network