timm13 (timm13,LOC107587003,LOC107731338,LOC106573564,LOC107593051)


Basic Information

Item Value
gene id timm13
gene name timm13,LOC107587003,LOC107731338,LOC106573564,LOC107593051
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5859347 ~ 5861332 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU222175
CTCAAGGGCACACTTATCACATGTACCGAAGCGACACTGACTTTAGTCCAGTGTGTCACTGTAATTAGGTCTATTGTTGTGTAAAATGGACAGTTTCGGGTCAGATTTCTCTTCGGGCTCCTCGTCTGGTAAAATGGACACAGGAACTATAATGGAGCAGGTCAAAGTTCAGATTGCTGTGGCAAACGCGCAAGAGCTGCTGCAGAGGATGACTGATAAATGCTTCAAGAAGTGCATTGGCAAGCCAGGAAGCACATTGGACAACTCCGAACAGAAATGCATTGCCATGTGCATGGACCGATATATGGACGCGTGGAACACGGTCTCCCGCGCGTATAACTCCAGATTACAGAGGGAAAGGGCACGTATTTGAGGTGCAGATGGCAGTCGGCACTACCTCAGTCCTCAGGTAGAGGTGTCTGGTCTCCGAATACACAACGGGTGTATAGACTTGGCTCTCTTACCACACAACAGCTGATGGCTACAGAAGGAACCAGGTGGTTGGATTTAGACTCTACATGGACATTTTTCATTAcgttttttgtgttaaaatgactATATAAGACATAAAAAAGCTCTTTAATAATCGACACGTTCGGATTAAGGCATTGATAATTGTAGTAGCGCTTATGCTTAAAACGATAGCTGGAATTGGGATGACAAAAGAACGGGTTTGGATTTAGCTCCACTTTCCCGTTCGGAGGtttcactttgttttaaaaacaatgcaaaatacAGATTTCTCCCCTTTTGCCGTTACCCATTTATCAAGCAGCTAATCAGAATTCAGCGTACCACCTGTCTGTCTTTTGTTATTGGGTGGATGTTGCTCCATTCCCCGAGGGAAGGGCTCACTTTACCGACTCTGTTCCACAAACCTAGTTGCTCTCCCAGAGGGGGAGAATTCAGGGGCGCCTTTGTTGCAGTAATTGTCGCTTCTTCACCAGGAGCAGCCAAACAGTCCTTCTTACTTAACTCTGAAGAACAAACTGCAATTGTCAACCCCGGAGTGTCGTTTGTCTCATTGTCTCATGAGTACAGTAGTAGGGCTGTTTAGCCGCGAGCCTTTGTAGTTCAATTTGTGTACACACGTCAAAATTTCCCATTTCCTTTGCTTCGTTGAGTCTGTGAAAGATTTGGACAGAGAAACTCCACCAAAGCATGTCCAGACAGATGCTGTGTAATTGTCACCAAgctgtttttatgaaatgcaaataaataccATATAATTAGTCca
>XM_043223026.1
GCGCTTCCGGTTCATCTCAAGGGCACACTTATCACATGTACCGAAGCGACACTGACTTTAGTCCAGTGTGTCACTGTAATTAGGTCTATTGTTGTGTAAAATGGACAGTTTCGGGTCAGATTTCTCTTCGGGCTCCTCGTCTGGTAAAATGGACACAGGAACTATAATGGAGCAGGTCAAAGTTCAGATTGCTGTGGCAAACGCGCAAGAGCTGCTGCAGAGGATGACTGATAAATGCTTCAAGAAGTGCATTGGCAAGCCAGGAAGCACATTGGACAACTCCGAACAGAAATGCATTGCCATGTGCATGGACCGATATATGGACGCGTGGAACACGGTCTCCCGCGCGTATAACTCCAGATTACAGAGGGAAAGGGCACGTATTTGAGGTGCAGATGGCAGTCGGCACTACCTCAGTCCTCAGGTAGAGGTGTCTGGTCTCCGAATACACAACGGGTGTATAGACTTGGCTCTCTTACCACACAACAGCTGATGGCTACAGAAGGAACCAGGTGGTTGGATTTAGACTCTACATGGACATTTTTCATTAcgttttttgtgttaaaatgactATATAAGACATAAAAAAGCTCTTTAATAATCGACACGTTCGGATTAAGGCATTGATAATTGTAGTAGCGCTTATGCTTAAAACGATAGCTGGAATTGGGATGACAAAAGAACGGGTTTGGATTTAGCTCCACTTTCCCGTTCGGAGGtttcactttgttttaaaaacaatgcaaaatacAGATTTCTCCCCTTTTGCCGTTACCCATTTATCAAGCAGCTAATCAGAATTCAGCGTACCACCTGTCTGTCTTTTGTTATTGGGTGGATGTTGCTCCATTCCCCGAGGGAAGGGCTCACTTTACCGACTCTGTTCCACAAACCTAGTTGCTCTCCCAGAGGGGGAGAATTCAGGGGCGCCTTTGTTGCAGTAATTGTCGCTTCTTCACCAGGAGCAGCCAAACAGTCCTTCTTACTTAACTCTGAAGAACAAACTGCAATTGTCAACCCCGGAGTGTCGTTTGTCTCATTGTCTCATGAGTACAGTAGTAGGGCTGTTTAGCCGCGAGCCTTTGTAGTTCAATTTGTGTACACACGTCAAAATTTCCCATTTCCTTTGCTTCGTTGAGTCTGTGAAAGATTTGGACAGAGAAACTCCACCAAAGCATGTCCAGACAGATGCTGTGTAATTGTCACCAAgctgtttttatgaaatgcaaataaataccATATAATTAGTCca

Function

symbol description
timm13 Predicted to enable metal ion binding activity. Predicted to be involved in protein insertion into mitochondrial inner membrane. Predicted to act upstream of or within protein transport. Predicted to be located in mitochondrial inner membrane and mitochondrial intermembrane space. Predicted to be part of mitochondrial intermembrane space protein transporter complex. Is expressed in several structures, including eye; immature eye; midbrain; myotome; and pectoral fin. Orthologous to human TIMM13 (translocase of inner mitochondrial membrane 13).

NR:

description
PREDICTED: mitochondrial import inner membrane translocase subunit Tim13

GO:

id name namespace
GO:0015031 protein transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K17781 TIM13; mitochondrial import inner membrane translocase subunit TIM13

RNA

RNA id representative length rna type GC content exon number start site end site
TU222175 False 1237 TUCP 0.44 3 5859347 5861317
XM_043223026.1 True 1252 mRNA 0.45 3 5859347 5861332

Neighbor

gene id symbol gene type direction distance location
sass6 sass6,LOC107756018,LOC107695611,LOC107731314 coding downstream 12417 5839748 ~ 5846930 (-)
LOC122327539 NA coding downstream 66293 5789815 ~ 5793054 (-)
bap1 bap1,LOC107704441,LOC107695622,LOC107755981 coding downstream 87274 5764038 ~ 5772073 (-)
LOC122327508 NA coding downstream 102169 5754395 ~ 5757178 (-)
shisa10.1 LOC107695620,LOC107756007 coding downstream 108265 5745190 ~ 5751082 (-)
arhgef18b arhgef18,LOC107695632,LOC107593089,LOC107586933,LOC107755984,LOC107704429 coding upstream 21494 5882826 ~ 5922490 (-)
insrb insrb,LOC107695633,LOC107586934,LOC107704428,LOC107593049 coding upstream 66184 5927516 ~ 5984443 (-)
atp6ap2 atp6ap2,LOC107663666,LOC107745967 coding upstream 150103 6011435 ~ 6016809 (-)
LOC122328173 LOC107708183,LOC107753648,LOC107696926,LOC103909885 coding upstream 234778 6096110 ~ 6097823 (-)
mid1ip1b mid1ip1b,LOC107756028,LOC107663600,LOC107704421,LOC107593044,LOC107745972,LOC107586944 coding upstream 324637 6185969 ~ 6187727 (-)
G150234 tmprss9,LOC107704409,LOC107731339,LOC107593090,LOC107695615,LOC107586983 non-coding downstream 4180 5854785 ~ 5855167 (-)
G150233 NA non-coding downstream 4944 5854201 ~ 5854403 (-)
G150232 NA non-coding downstream 7457 5851285 ~ 5851890 (-)
G150152 NA non-coding downstream 35434 5822929 ~ 5823913 (-)
G150126 wu:fb55g09,LOC107587000,LOC107755988,LOC107704455,LOC107720989,LOC107658378,LOC107593068 non-coding downstream 203971 5654051 ~ 5655376 (-)
G150271 NA non-coding upstream 283546 6144878 ~ 6155016 (-)
G150273 NA non-coding upstream 296165 6157497 ~ 6183901 (-)
LOC122327580 NA non-coding upstream 451843 6313175 ~ 6314227 (-)
G150216 krt97,krt96,LOC107663680,LOC107745983,LOC107593038,LOC107739339,LOC107580444 non-coding upstream 482807 6344139 ~ 6345150 (-)
G150322 NA non-coding upstream 516355 6377687 ~ 6381972 (-)
LOC122327537 NA other downstream 95365 5758006 ~ 5763982 (-)
nol8 LOC107586918 other downstream 186538 5661741 ~ 5672809 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other downstream 207188 5638138 ~ 5652159 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other downstream 317267 5538556 ~ 5542080 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other downstream 326538 5527230 ~ 5532809 (-)
use1 use1,LOC107756022,LOC107745970,LOC107593088 other upstream 128165 5989497 ~ 5992758 (-)
G150276 npb,LOC107587005,LOC107663585,LOC107756033,LOC107704419,LOC107593099 other upstream 374920 6236252 ~ 6236865 (-)
gcga gcga,LOC107755995,LOC107663711,LOC107593098,LOC107704412,LOC107586984 other upstream 421124 6282456 ~ 6285580 (-)
G150440 r3hdm1,LOC107739334 other upstream 654233 6515565 ~ 6659352 (-)
cep70 cep70,LOC107739332,LOC107576760,LOC107653595,LOC107754238,LOC107576761,LOC107687877,LOC107587009,LOC107600947,LOC107682686 other upstream 853462 6714794 ~ 6728690 (-)

Expression


Co-expression Network