G150216 (krt97,krt96,LOC107663680,LOC107745983,LOC107593038,LOC107739339,LOC107580444)


Basic Information

Item Value
gene id G150216
gene name krt97,krt96,LOC107663680,LOC107745983,LOC107593038,LOC107739339,LOC107580444
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 6344139 ~ 6345150 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU222325
tacttaattactAGAATTAAGTGTGATATTTAAGTTACATAAACGTAATGAAAGGAGGTTTTAAATGATGGAATTAAAAGGTAAAGGTTTTTGTGCTAACTTGACTCTGAAGTCCTCGGCGGCCAGCTTGGCGTTGTCAATCTGAAGGATGATTCTGGCGTTGTCCTGGCTGGCGACAGCGATTTTTTGCGCAGATCTTCAATGGTAACGTAATAGTGGCTGTAGTCTCTGGAGACGGGGGTTCTCTTCTCGTACCACTCCCGGATCTGGCGCTCCAGCTGCGCGTTGGCTTTCTCAAGGGAGCGCACCTTCTCCAGGTAGCTCGCCAGGCGGTCGTTGAGGTTCTGCATGGTGGTCTTCTCGTTAAAAGCCACGCCGAAGCCATTgtcgccgccgccgccgccgagCGCGCTGGCCAGGTCGAAACCGCTCTTGCTGCTCTGCGCGTAAGAGACGCGCACGCTGTTGGCCCCCGCACCCGCGTAGACGCTCGGCGCGTGACCGACGGCGATGCGCTTGGAGTATCCTCCGCTGAGCGAGAGCGAGGTGAAGGGGCGAGAGCTGGAGCTGGACAAGCTCTTGCGTGAGAAAGACTGGGTAACCTGAGTCATGGTTTCTGTTCCTGTTGCCTTCGCGCTTTGCTGGACACCTCTCGCGGC

Function

symbol description
krt97 Predicted to enable structural molecule activity. Predicted to be located in intermediate filament. Is expressed in several structures, including EVL; fin; hatching gland; integument; and sensory system. Human ortholog(s) of this gene implicated in several diseases, including autosomal recessive woolly hair 3; ectodermal dysplasia (multiple); epidermolysis bullosa simplex (multiple); epidermolytic hyperkeratosis; and palmoplantar keratosis (multiple). Orthologous to several human genes including KRT13 (keratin 13); KRT14 (keratin 14); and KRT15 (keratin 15).
krt96 Predicted to enable structural molecule activity. Predicted to be located in intermediate filament.

NR:

description
PREDICTED: keratin, type I cytoskeletal 19-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222325 True 659 lncRNA 0.56 2 6344139 6345150

Neighbor

gene id symbol gene type direction distance location
krt222 krt222,LOC107586952,LOC107663524,LOC107745982,LOC107653582,LOC107755987,LOC107593079 coding downstream 8142 6322433 ~ 6335997 (-)
crygs1 crygs1,LOC107756035,LOC107586953,LOC107663530 coding downstream 22053 6318996 ~ 6322086 (-)
mettl21a mettl21a,LOC107663696,LOC107704411,LOC108415896 coding downstream 35828 6306421 ~ 6308311 (-)
dpp4 dpp4,LOC107663703,LOC107586951,LOC107755996,LOC107593097,LOC107745999,LOC107704406 coding downstream 42636 6286427 ~ 6301503 (-)
pcyt2 pcyt2,LOC107745976,LOC107756034,LOC107704410,LOC107593040,LOC107586950,LOC103356210,LOC105905797 coding downstream 62010 6272453 ~ 6282129 (-)
ptpn4b ptpn4b,LOC107586954,LOC107653584,LOC107593078 coding upstream 2501 6347651 ~ 6375093 (-)
pth2rb LOC107739359,LOC107587008,LOC107663669,LOC107653586,LOC107746000,LOC107593036 coding upstream 49433 6394583 ~ 6414114 (-)
tmem163b tmem163b,tmem163,LOC107739337,LOC107586956,LOC107663488,LOC107745987,LOC107653588,LOC105909211,LOC103367750,LOC107381042 coding upstream 128631 6473781 ~ 6501308 (-)
zranb3 zranb3,LOC107687885,LOC107663643,LOC107710929 coding upstream 179636 6524786 ~ 6578427 (-)
adarb1a LOC107687876,LOC107586961,LOC107600973,LOC107754241,LOC107653596,LOC107739329 coding upstream 384632 6729782 ~ 6755792 (-)
LOC122327580 NA non-coding downstream 29912 6313175 ~ 6314227 (-)
G150273 NA non-coding downstream 160238 6157497 ~ 6183901 (-)
G150271 NA non-coding downstream 189123 6144878 ~ 6155016 (-)
G150234 tmprss9,LOC107704409,LOC107731339,LOC107593090,LOC107695615,LOC107586983 non-coding downstream 488972 5854785 ~ 5855167 (-)
G150233 NA non-coding downstream 489736 5854201 ~ 5854403 (-)
G150322 NA non-coding upstream 32537 6377687 ~ 6381972 (-)
G150325 NA non-coding upstream 39006 6384156 ~ 6386767 (-)
G150453 NA non-coding upstream 252754 6597904 ~ 6599533 (-)
G150442 NA non-coding upstream 257905 6603055 ~ 6606554 (-)
G150456 NA non-coding upstream 262639 6607789 ~ 6609628 (-)
gcga gcga,LOC107755995,LOC107663711,LOC107593098,LOC107704412,LOC107586984 other downstream 58559 6282456 ~ 6285580 (-)
G150276 npb,LOC107587005,LOC107663585,LOC107756033,LOC107704419,LOC107593099 other downstream 107274 6236252 ~ 6236865 (-)
use1 use1,LOC107756022,LOC107745970,LOC107593088 other downstream 351381 5989497 ~ 5992758 (-)
timm13 timm13,LOC107587003,LOC107731338,LOC106573564,LOC107593051 other downstream 482807 5859347 ~ 5861332 (-)
LOC122327537 NA other downstream 580157 5758006 ~ 5763982 (-)
G150440 r3hdm1,LOC107739334 other upstream 170415 6515565 ~ 6659352 (-)
cep70 cep70,LOC107739332,LOC107576760,LOC107653595,LOC107754238,LOC107576761,LOC107687877,LOC107587009,LOC107600947,LOC107682686 other upstream 369644 6714794 ~ 6728690 (-)
glsa glsa,LOC107754246,LOC107600978,LOC107739327,LOC107653599,LOC107586966,LOC107687871 other upstream 477053 6822203 ~ 6939000 (-)
nab1a nab1a,LOC107687893,LOC107653562,LOC107739354,LOC107754250,LOC107600950 other upstream 501740 6846890 ~ 6889657 (-)
mfsd6a mfsd6a,LOC107687869,LOC107739325,LOC107600976,LOC107653600,LOC107754251,LOC105022531 other upstream 520073 6865223 ~ 6873200 (-)

Expression


Co-expression Network