G150233


Basic Information

Item Value
gene id G150233
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5854201 ~ 5854403 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU222348
CTCACTTGTGTACTGATTAAGAGCTCCCCAGCCAGAGACGATGCAGTTTTGCCCAGGACTGAAAATATGAGAGGATGATGGGATACAGACTGGCTGAACATAAGAGCTGAACGTCAGCGGTGTTTCCAACTCCAGCACGGTCACATCGCTGTCAGTGGTCATTGGATCGTATCTTGGAGACACGACCAGGGACTTGATGTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222348 True 203 lncRNA 0.49 1 5854201 5854403

Neighbor

gene id symbol gene type direction distance location
sass6 sass6,LOC107756018,LOC107695611,LOC107731314 coding downstream 7271 5839748 ~ 5846930 (-)
LOC122327539 NA coding downstream 61147 5789815 ~ 5793054 (-)
bap1 bap1,LOC107704441,LOC107695622,LOC107755981 coding downstream 82128 5764038 ~ 5772073 (-)
LOC122327508 NA coding downstream 97023 5754395 ~ 5757178 (-)
shisa10.1 LOC107695620,LOC107756007 coding downstream 103119 5745190 ~ 5751082 (-)
arhgef18b arhgef18,LOC107695632,LOC107593089,LOC107586933,LOC107755984,LOC107704429 coding upstream 28423 5882826 ~ 5922490 (-)
insrb insrb,LOC107695633,LOC107586934,LOC107704428,LOC107593049 coding upstream 73113 5927516 ~ 5984443 (-)
atp6ap2 atp6ap2,LOC107663666,LOC107745967 coding upstream 157032 6011435 ~ 6016809 (-)
LOC122328173 LOC107708183,LOC107753648,LOC107696926,LOC103909885 coding upstream 241707 6096110 ~ 6097823 (-)
mid1ip1b mid1ip1b,LOC107756028,LOC107663600,LOC107704421,LOC107593044,LOC107745972,LOC107586944 coding upstream 331566 6185969 ~ 6187727 (-)
G150232 NA non-coding downstream 2311 5851285 ~ 5851890 (-)
G150152 NA non-coding downstream 30288 5822929 ~ 5823913 (-)
G150126 wu:fb55g09,LOC107587000,LOC107755988,LOC107704455,LOC107720989,LOC107658378,LOC107593068 non-coding downstream 198825 5654051 ~ 5655376 (-)
G150184 NA non-coding downstream 249783 5604157 ~ 5604418 (-)
G150125 LOC107586915,LOC107745408,LOC107658396,LOC107721006,LOC107593072 non-coding downstream 271160 5579470 ~ 5583041 (-)
G150234 tmprss9,LOC107704409,LOC107731339,LOC107593090,LOC107695615,LOC107586983 non-coding upstream 382 5854785 ~ 5855167 (-)
G150271 NA non-coding upstream 290475 6144878 ~ 6155016 (-)
G150273 NA non-coding upstream 303094 6157497 ~ 6183901 (-)
LOC122327580 NA non-coding upstream 458772 6313175 ~ 6314227 (-)
G150216 krt97,krt96,LOC107663680,LOC107745983,LOC107593038,LOC107739339,LOC107580444 non-coding upstream 489736 6344139 ~ 6345150 (-)
LOC122327537 NA other downstream 90219 5758006 ~ 5763982 (-)
nol8 LOC107586918 other downstream 181392 5661741 ~ 5672809 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other downstream 202042 5638138 ~ 5652159 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other downstream 312121 5538556 ~ 5542080 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other downstream 321392 5527230 ~ 5532809 (-)
timm13 timm13,LOC107587003,LOC107731338,LOC106573564,LOC107593051 other upstream 4944 5859347 ~ 5861332 (-)
use1 use1,LOC107756022,LOC107745970,LOC107593088 other upstream 135094 5989497 ~ 5992758 (-)
G150276 npb,LOC107587005,LOC107663585,LOC107756033,LOC107704419,LOC107593099 other upstream 381849 6236252 ~ 6236865 (-)
gcga gcga,LOC107755995,LOC107663711,LOC107593098,LOC107704412,LOC107586984 other upstream 428053 6282456 ~ 6285580 (-)
G150440 r3hdm1,LOC107739334 other upstream 661162 6515565 ~ 6659352 (-)

Expression


Co-expression Network