G150276 (npb,LOC107587005,LOC107663585,LOC107756033,LOC107704419,LOC107593099)


Basic Information

Item Value
gene id G150276
gene name npb,LOC107587005,LOC107663585,LOC107756033,LOC107704419,LOC107593099
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 6236252 ~ 6236865 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU222410
gtatacaaaaagtatttaaagacATTCAGACATGCATTTGAATCTACATAAATCAATGTTATTCATATCGTAGATGTCATTACACATAtgttctgaaaatatatttaaaaaaaaattacatatatatttacatatactaaCTTTGCTCAGTAAGCATTGTATAATGGTTATGAAtaaattttttatgtattatttattttatttttttaattaacatttttaacttttaaatgaaacagtTAAAATAGTGTAGCTATATATAGCCTATGCGTTTCCTCAGATATAGGAAGAGAGTTTACCATGTTTTTAAGAACCGGAGTTGGTCTGCTGCTGAAGTCGGGCATCACGCTGTTGGAGACGCCGGGGGTCTCGCTGCTGTCCAGCGCCGATTCCGTCTCAGATCTGCGCACGTACGGCGACCTCCGGATCCCGGACAGCAAACCCGAGGCTCTCCCGACGGAATAGTAGCTCGGCCCGGTGGACTGCTTGTACCAGGCGTCTGTGGGATGGCTGGAGATGAGGATGGAAACGGCCACGAACACGAGCACGGATCTGACGGACCTCTCCATTGCGCACTGGACCCAAACGCGTGCTTTGCGATCTGTGGTGCCTCG

Function

symbol description
npb Predicted to enable G protein-coupled receptor binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway and feeding behavior. Predicted to act upstream of or within neuropeptide signaling pathway. Predicted to be located in extracellular region. Is expressed in head mesenchyme; nervous system; and neural tube. Orthologous to several human genes including NPB (neuropeptide B).

NR:

description
PREDICTED: neuropeptide B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222410 True 614 TUCP 0.42 1 6236252 6236865

Neighbor

gene id symbol gene type direction distance location
slc26a11 slc26a11,LOC107663565,LOC107756030,LOC107745975,LOC107593041,LOC107704413,LOC107586945 coding downstream 5078 6221862 ~ 6231174 (-)
tspan7b tspan7b,tspan7,LOC107586946,LOC107756029,LOC107745974,LOC107704418,LOC107593043 coding downstream 19638 6190074 ~ 6216614 (-)
mid1ip1b mid1ip1b,LOC107756028,LOC107663600,LOC107704421,LOC107593044,LOC107745972,LOC107586944 coding downstream 48525 6185969 ~ 6187727 (-)
LOC122328173 LOC107708183,LOC107753648,LOC107696926,LOC103909885 coding downstream 138429 6096110 ~ 6097823 (-)
atp6ap2 atp6ap2,LOC107663666,LOC107745967 coding downstream 219443 6011435 ~ 6016809 (-)
gnav1 gnav1,LOC107756032,LOC107745977,LOC107663576,LOC107586948,LOC107704417,LOC107593084,LOC106591843,LOC108259514 coding upstream 1492 6238357 ~ 6271357 (-)
pcyt2 pcyt2,LOC107745976,LOC107756034,LOC107704410,LOC107593040,LOC107586950,LOC103356210,LOC105905797 coding upstream 35588 6272453 ~ 6282129 (-)
dpp4 dpp4,LOC107663703,LOC107586951,LOC107755996,LOC107593097,LOC107745999,LOC107704406 coding upstream 49562 6286427 ~ 6301503 (-)
mettl21a mettl21a,LOC107663696,LOC107704411,LOC108415896 coding upstream 69556 6306421 ~ 6308311 (-)
crygs1 crygs1,LOC107756035,LOC107586953,LOC107663530 coding upstream 82131 6318996 ~ 6322086 (-)
G150273 NA non-coding downstream 52351 6157497 ~ 6183901 (-)
G150271 NA non-coding downstream 81236 6144878 ~ 6155016 (-)
G150234 tmprss9,LOC107704409,LOC107731339,LOC107593090,LOC107695615,LOC107586983 non-coding downstream 381085 5854785 ~ 5855167 (-)
G150233 NA non-coding downstream 381849 5854201 ~ 5854403 (-)
G150232 NA non-coding downstream 384362 5851285 ~ 5851890 (-)
LOC122327580 NA non-coding upstream 76310 6313175 ~ 6314227 (-)
G150216 krt97,krt96,LOC107663680,LOC107745983,LOC107593038,LOC107739339,LOC107580444 non-coding upstream 107274 6344139 ~ 6345150 (-)
G150322 NA non-coding upstream 140822 6377687 ~ 6381972 (-)
G150325 NA non-coding upstream 147291 6384156 ~ 6386767 (-)
G150453 NA non-coding upstream 361039 6597904 ~ 6599533 (-)
use1 use1,LOC107756022,LOC107745970,LOC107593088 other downstream 243494 5989497 ~ 5992758 (-)
timm13 timm13,LOC107587003,LOC107731338,LOC106573564,LOC107593051 other downstream 374920 5859347 ~ 5861332 (-)
LOC122327537 NA other downstream 472270 5758006 ~ 5763982 (-)
nol8 LOC107586918 other downstream 563443 5661741 ~ 5672809 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other downstream 584093 5638138 ~ 5652159 (-)
gcga gcga,LOC107755995,LOC107663711,LOC107593098,LOC107704412,LOC107586984 other upstream 45591 6282456 ~ 6285580 (-)
G150440 r3hdm1,LOC107739334 other upstream 278700 6515565 ~ 6659352 (-)
cep70 cep70,LOC107739332,LOC107576760,LOC107653595,LOC107754238,LOC107576761,LOC107687877,LOC107587009,LOC107600947,LOC107682686 other upstream 477929 6714794 ~ 6728690 (-)
glsa glsa,LOC107754246,LOC107600978,LOC107739327,LOC107653599,LOC107586966,LOC107687871 other upstream 585338 6822203 ~ 6939000 (-)
nab1a nab1a,LOC107687893,LOC107653562,LOC107739354,LOC107754250,LOC107600950 other upstream 610025 6846890 ~ 6889657 (-)

Expression


Co-expression Network