G150442


Basic Information

Item Value
gene id G150442
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 6603055 ~ 6606554 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU222668
gatattcagctaaattcaaaatgactaataaataaatgaataaattacttattaaatttattttaattatttattaaaatttctaaatataaaatattttgaaacgttatttaaaaagacaacatttattaaaatgaaatgtaaaaaaatctaaattattcaatgtaaaaatatcaaagaaataaaaagagtaagttgaaacatttattaaaaatgaaagtatactaaaataatatttaaggaacacatttttcaaaaaacattagtTTTCCCTGACCTGTGCTAGAAGGTGATTGGCTGGCTGAGgttgaggaggaggaggcagaGGCGGAGGGGCCGGGGGAGGGTGTAGAGCCATGGGCTGCTGGCCCCGCCCCTGCTGTGATGTCAGCGTGGGGTTATAGATCACTGGGCTGACTGGTTTTGGACAGTTTCCCGGTGCTCTTGCTGCTGGCTGTACTGTCTCCTCGGATCAGCAGGCTGATGCCGCTGAAGCTGTTGGCTTTGGTCATGGCAGGCTTCAGGTTCCTGTGGGAGCTGTCTGAATCCGTGCTGCTCCAGGGCCGAGGGTCCGAATACTTCAGCTCGTTCTCGGAGCTGCTCTGACGGCTGTTTCCCGAGTGCCCGTCT

Function

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034220 ion transmembrane transport biological_process
GO:0098655 cation transmembrane transport biological_process
GO:0098660 inorganic ion transmembrane transport biological_process
GO:0098662 inorganic cation transmembrane transport biological_process
GO:0015672 monovalent inorganic cation transport biological_process
GO:0030001 metal ion transport biological_process
GO:0006811 ion transport biological_process
GO:0006812 cation transport biological_process
GO:0006813 potassium ion transport biological_process

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04742 Taste transduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU222668 True 630 lncRNA 0.41 2 6603055 6606554

Neighbor

gene id symbol gene type direction distance location
zranb3 zranb3,LOC107687885,LOC107663643,LOC107710929 coding downstream 24628 6524786 ~ 6578427 (-)
tmem163b tmem163b,tmem163,LOC107739337,LOC107586956,LOC107663488,LOC107745987,LOC107653588,LOC105909211,LOC103367750,LOC107381042 coding downstream 101747 6473781 ~ 6501308 (-)
pth2rb LOC107739359,LOC107587008,LOC107663669,LOC107653586,LOC107746000,LOC107593036 coding downstream 188941 6394583 ~ 6414114 (-)
ptpn4b ptpn4b,LOC107586954,LOC107653584,LOC107593078 coding downstream 227962 6347651 ~ 6375093 (-)
krt222 krt222,LOC107586952,LOC107663524,LOC107745982,LOC107653582,LOC107755987,LOC107593079 coding downstream 267058 6322433 ~ 6335997 (-)
adarb1a LOC107687876,LOC107586961,LOC107600973,LOC107754241,LOC107653596,LOC107739329 coding upstream 123228 6729782 ~ 6755792 (-)
slx9 LOC107687875,LOC107754253,LOC107739358,LOC107586963 coding upstream 151731 6758285 ~ 6774697 (-)
plcd4a plcd4a,LOC107739328,LOC107600964,LOC107687884,LOC107586990,LOC103363317 coding upstream 168768 6775322 ~ 6789529 (-)
cnot9 rqcd1,cnot9,LOC107586962,LOC107687874,LOC107600965,LOC107653560 coding upstream 185120 6791674 ~ 6797085 (-)
LOC122328175 LOC107751494,LOC107739353 coding upstream 267905 6874459 ~ 6880468 (-)
G150453 NA non-coding downstream 3522 6597904 ~ 6599533 (-)
G150325 NA non-coding downstream 216288 6384156 ~ 6386767 (-)
G150322 NA non-coding downstream 221083 6377687 ~ 6381972 (-)
G150216 krt97,krt96,LOC107663680,LOC107745983,LOC107593038,LOC107739339,LOC107580444 non-coding downstream 257905 6344139 ~ 6345150 (-)
LOC122327580 NA non-coding downstream 288828 6313175 ~ 6314227 (-)
G150456 NA non-coding upstream 1235 6607789 ~ 6609628 (-)
G150472 NA non-coding upstream 192609 6799163 ~ 6805440 (-)
G150488 NA non-coding upstream 279995 6886549 ~ 6887136 (-)
G150490 LOC107739322,LOC107653601,LOC107586968,LOC107687868,LOC107751479 non-coding upstream 292689 6899243 ~ 6902815 (-)
G150494 NA non-coding upstream 333064 6939618 ~ 6940626 (-)
gcga gcga,LOC107755995,LOC107663711,LOC107593098,LOC107704412,LOC107586984 other downstream 317475 6282456 ~ 6285580 (-)
G150276 npb,LOC107587005,LOC107663585,LOC107756033,LOC107704419,LOC107593099 other downstream 366190 6236252 ~ 6236865 (-)
use1 use1,LOC107756022,LOC107745970,LOC107593088 other downstream 610297 5989497 ~ 5992758 (-)
timm13 timm13,LOC107587003,LOC107731338,LOC106573564,LOC107593051 other downstream 741723 5859347 ~ 5861332 (-)
LOC122327537 NA other downstream 839073 5758006 ~ 5763982 (-)
cep70 cep70,LOC107739332,LOC107576760,LOC107653595,LOC107754238,LOC107576761,LOC107687877,LOC107587009,LOC107600947,LOC107682686 other upstream 108240 6714794 ~ 6728690 (-)
glsa glsa,LOC107754246,LOC107600978,LOC107739327,LOC107653599,LOC107586966,LOC107687871 other upstream 215649 6822203 ~ 6939000 (-)
nab1a nab1a,LOC107687893,LOC107653562,LOC107739354,LOC107754250,LOC107600950 other upstream 240336 6846890 ~ 6889657 (-)
mfsd6a mfsd6a,LOC107687869,LOC107739325,LOC107600976,LOC107653600,LOC107754251,LOC105022531 other upstream 258669 6865223 ~ 6873200 (-)
G150492 ahr1b,LOC107653601,LOC107600975,LOC107751479,LOC107687868,LOC107586968,LOC107739322 other upstream 299446 6906000 ~ 6913558 (-)

Expression


Co-expression Network