G150948


Basic Information

Item Value
gene id G150948
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 8931479 ~ 8932019 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU223400
GACGACATGAGACTCTGCTGGGTAGTTGCGCTGATGCTTGTAGATGGTCCACGACGTTTACCAACACTTGTTTGGGTCTGTAATTTCTTTGCATCTTCGTATTCTGAAGGGTGacgttgttttaaatgatgaaagaggTTTGTGGTGTTGCCTGTTTTTGATGGCACGAGTCGTCTGCACAGTTTGCAGTGCACGTCGCTCTGTTTTGTGTCGGATTGCAAAAAACCAAAATAGCTCCAGACTACTGAAGTTGAGTGACCTTTCTTGTCAACTAAGTCTGTGACCTGCGAGCTAGTCGTGGACGGTGCATTTTCTTCACTGTCGCTCATTTTTCTTACTCCTCCAACACGTGCAACTGACACTGTATGGCTGTATAGTACTAACACTGCGTGTGGCATCCAGAAGCGCAGGCTGCAAAATGCGTGCGCAGCGTTACGTATAGTGCGTAAACATTATCGAGCGCTTATCGAACTGTCATTATCGTGTTATCGAGAAAATTTATATCGTGAAAATTATCGTTATCGaattatcgcccagccct

Function

GO:

id name namespace
GO:0007034 vacuolar transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223400 True 541 lncRNA 0.45 1 8931479 8932019

Neighbor

gene id symbol gene type direction distance location
tal1 tal1,LOC107669848 coding upstream 45051 8880269 ~ 8886428 (+)
ier5 ier5,LOC107731541 coding upstream 71410 8858464 ~ 8860069 (+)
si:dkey-121a11.3 si:dkey-121a11.3,LOC107669817,LOC107731537,LOC107715110,LOC107653549 coding upstream 84423 8828910 ~ 8847056 (+)
LOC122327627 LOC107653644,LOC107715111,LOC107588053,LOC100711005,LOC102215641,LOC101481666 coding upstream 111885 8813432 ~ 8819594 (+)
ankrd29 ankrd29,LOC107669827,LOC107653646,LOC107731532,LOC107715109 coding upstream 118613 8807166 ~ 8812866 (+)
tm2d1 tm2d1,LOC107715116,LOC107653653,LOC107669801,LOC106574044 coding downstream 63952 8995971 ~ 9004905 (+)
frem1b frem1b,LOC107669836,LOC107599441,LOC107592728,LOC107728586,LOC107715059,LOC107653550 coding downstream 266005 9198024 ~ 9223536 (+)
atpaf1 atpaf1,LOC107653579,LOC107715059 coding downstream 291791 9223810 ~ 9227301 (+)
rab3b rab3b,LOC107592692,LOC107653655,LOC107669838,LOC108429523,LOC103027359,LOC108270584,LOC105904424 coding downstream 296389 9228408 ~ 9235230 (+)
nrd1b nrd1b,LOC107669832,LOC107592727,LOC107728531 coding downstream 304080 9236099 ~ 9248034 (+)
G150944 NA non-coding upstream 12814 8918063 ~ 8918665 (+)
G150943 NA non-coding upstream 21349 8909930 ~ 8910130 (+)
G150942 NA non-coding upstream 23000 8907397 ~ 8908479 (+)
G150941 patj,inadl,LOC107715056,LOC107731530,LOC107669802 non-coding upstream 25545 8903074 ~ 8905934 (+)
G150939 NA non-coding upstream 30507 8899576 ~ 8900972 (+)
G150949 NA non-coding downstream 538 8932557 ~ 8932788 (+)
G150951 NA non-coding downstream 6384 8938403 ~ 8938776 (+)
G150952 NA non-coding downstream 12417 8944436 ~ 8946194 (+)
G150953 NA non-coding downstream 15097 8947116 ~ 8947710 (+)
G150959 patj,inadl,LOC107669802,LOC107731530,LOC107715056 non-coding downstream 34524 8966543 ~ 8973285 (+)
G150946 NA other upstream 9512 8921698 ~ 8921967 (+)
G150945 NA other upstream 11699 8919279 ~ 8919780 (+)
G150940 NA other upstream 29168 8901143 ~ 8902311 (+)
pdzk1ip1 NA other upstream 39280 8890622 ~ 8892199 (+)
G150862 s1pr1,LOC107715096,LOC107592715,LOC107669844,LOC107653630,LOC107588065 other upstream 313874 8614289 ~ 8617605 (+)
G150965 NA other downstream 56167 8988186 ~ 8988691 (+)
march2 march2,LOC107728591,LOC107669840,LOC107655247,LOC107592682,LOC107599445 other downstream 522819 9454838 ~ 9530165 (+)
G151232 NA other downstream 645660 9577679 ~ 9580151 (+)
borcs8 borcs8,LOC107728595,LOC107554813,LOC107599453 other downstream 956144 9888163 ~ 9893507 (+)
mef2b LOC107687723,LOC107554810,LOC107728551,LOC107719669,LOC107655235,LOC107599488 other downstream 963422 9895441 ~ 9910793 (+)

Expression


Co-expression Network