G151439


Basic Information

Item Value
gene id G151439
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10053918 ~ 10072892 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU224106
GATTTTAgcaacagaaaatgaaattcTTAGAAGACTTGTGTGAAAGGGTTACAAATCACCTTTTATTTTAAGCTCGCGCCACACATGATTGGTGTAAAACTAAGGCCAAAGAGAAATGAAAGGCAACTAAATGAATTTATCCAGCTTGCCCTTCCATGTTTCATATTGCTGCTGAGCAGGTGGTTTCATAACGTCATGAATCCATGAAAAGTAGTGCGAAATATGAGTGTACGCTGTgagagaaatgctttttttgtgaaatgccACAATTCCCTGTACGTAATTTCCACAAACAAGTGGCCCTCCAGAGTCTCCCTGTGGATTATatcatttgattattaatatactgATATTACACTCGTACGCCATAGATGATGATTTGTGAGTGGTGCATCTTGAAATACCTGCGCTGGTCCAACTGATCCCTGGTTGCACAAAGTATCAGCCGTGCCACAGTTTTTAGAGTCCAGCAGAGTCACGTTTACTTCTCTCAGCACATTTGACGGAGACTCTTCGTCGTATTTCCTCCAGCCCCAACCCATGACCATGCAGTTCTTTGAGATCGCTTCGTTCTCAGGTTTCGGCAAAGAGATAATACTCACGTTTTTGTTCAAAATCGCTTTGgttttcagctgaaagaaaaagatgctTCAGTTGATAACCGCTACATTTCATTTGGtgtttacagaaatattaaagataAGCAGAGCAAAGGTATATttgataaatgttatatataaatgaaatcattttattaccAATCAATAATCATCTTATTACCTTTAGAAGCATGATGTCATGGCCTGGCCTCTTAATTTTGTATCCTGGATGTGGAAAAGCATCTACTTCTATACCGCAAGGTAAGTTGTTGGTGTTGTCAACCCCCAAATATACCATGAGATTACGACAACTACATGAATAAATTGATATTGTAGAGGCCATAGTTACAAAACGattcatacatattttcaaGAATGACACGACTGCCACTTCGTATGTTAAATGTCGACGCAACATCAACCTCGTTATTAAACTGTAACTAAGTTCAATCAACAATTGCAGTGATATTGCTCCCCTCTGCAGAGCTGCTGATAGCtgaattaaacttatttttaaaatatataaaccttaCATTGTAATTGATCTGAACTGTGCCAAAACTGAACTGATTTGTCTTTTTAGAGCTGCTTGgaacagaatttaaattgttTCCATCAATGAGTTTTCCGTgatatattcagtttttttctggtTTGTTGCGGTAAAGCTGAAATTGACTTCATTGTATATAGCGCTAAAggaaagaaagtgttttttttttgtttttttttttttttttttttta

Function

GO: NA

KEGG:

id description
ko03060 Protein export
ko03070 Bacterial secretion system
ko02024 Quorum sensing

RNA

RNA id representative length rna type GC content exon number start site end site
TU224106 True 1345 lncRNA 0.36 2 10053918 10072892

Neighbor

gene id symbol gene type direction distance location
si:ch211-212d10.2 si:ch211-212d10.2,LOC107728577,LOC107687719,LOC106613739,LOC101487565 coding downstream 6044 10044222 ~ 10047874 (-)
tssk6 tssk6,LOC107687737,LOC107728539,LOC107554804,LOC107599475,LOC107719648 coding downstream 58911 9994192 ~ 9995007 (-)
tmem161a tmem161a,LOC107728546,LOC107599454,LOC107719614,LOC107554814,LOC107687722 coding downstream 135002 9913423 ~ 9918916 (-)
tmem221 NA coding downstream 158951 9890550 ~ 9894967 (-)
rfxank rfxank,LOC107687741,LOC107554808,LOC107728547,LOC107719616,LOC107599486 coding downstream 166059 9886173 ~ 9887859 (-)
cirbpb LOC107599461,LOC107655227,LOC107719610 coding upstream 2140 10075032 ~ 10080097 (-)
midn LOC107554818,LOC107728568,LOC107687715,LOC107655225,LOC107719606 coding upstream 78570 10151462 ~ 10173317 (-)
atp5f1d atp5d,LOC107728581,LOC107719603,LOC107554819,LOC107569937 coding upstream 110146 10183038 ~ 10187587 (-)
LOC122328192 NA coding upstream 321120 10394012 ~ 10396169 (-)
LOC122327734 celf5a,celf5,LOC107675909 coding upstream 394235 10467127 ~ 11650822 (-)
G151444 NA non-coding downstream 25479 10023218 ~ 10028439 (-)
LOC122327858 NA non-coding downstream 188030 9819693 ~ 9865888 (-)
G151319 hapln4,LOC107554801,LOC107728536,LOC107719665,LOC107599484 non-coding downstream 432753 9616790 ~ 9621165 (-)
G151289 NA non-coding downstream 589405 9426153 ~ 9464513 (-)
G151266 NA non-coding downstream 599571 9360531 ~ 9454347 (-)
G151468 LOC107687734,LOC107728578,LOC107719602,LOC107655224,LOC107569929 non-coding upstream 116938 10189830 ~ 10194857 (-)
G151457 NA non-coding upstream 172026 10244918 ~ 10249842 (-)
G151507 NA non-coding upstream 302281 10375173 ~ 10375615 (-)
G151508 NA non-coding upstream 302749 10375641 ~ 10375960 (-)
G151569 NA non-coding upstream 369595 10442487 ~ 10442738 (-)
G151425 NA other downstream 70771 9957811 ~ 9983147 (-)
gpx4a gpx4a,LOC108429535 other downstream 550912 9498669 ~ 9503006 (-)
nfia nfia,LOC107592693,LOC107599440,LOC107653654 other downstream 881987 9013548 ~ 9171931 (-)
G151107 tal1,LOC107669848 other downstream 1166977 8884121 ~ 8886941 (-)
zbtb37 zbtb37,LOC107588063,LOC107757486,LOC107653628,LOC107669814,LOC107715095,LOC107592718,LOC107592717,LOC107669813,LOC107715094,LOC107757485,LOC107588062,LOC107653629 other downstream 1441174 8600350 ~ 8612744 (-)
polrmt LOC107687709,LOC107728563,LOC107569934,LOC107655172,LOC107719647,LOC107569035,LOC101483880 other upstream 209130 10282022 ~ 10321663 (-)
micos13 si:dkey-78l4.14,LOC107596903,LOC107719663,LOC107586453,LOC107675912,LOC107655188 other upstream 346235 10419127 ~ 10422354 (-)
oaz1a oaz1a,oaz1s,oaz1,LOC107719576,LOC107655198,LOC107586434 other upstream 862160 10935052 ~ 10994952 (-)
rex1bd si:ch211-87h14.3,clg08h19orf60,cssa23h19orf60,LOC107676986,LOC107729673,LOC107593355,LOC107719569,LOC108439285,LOC103025814 other upstream 1101251 11174143 ~ 11188692 (-)
cks2 cks2,LOC107699408,LOC107593315,LOC107729701,LOC103026129,LOC108230759,LOC105927846,LOC106584418 other upstream 1157082 11229974 ~ 11231249 (-)

Expression


Co-expression Network