G151668


Basic Information

Item Value
gene id G151668
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10783638 ~ 10784242 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU224427
TCTGAACGGAGGAGTGAAAATCAGTGACaagatgctaaaaataataaagcgtGTCGGACCCAAATACGTCTCCATTGCCAGAACGTGGGTTCCCACGCTGATCGGATGGGGTACGGTCGGTGGCCTGGCTGTTGTCTATTTTACAGACTGATTTTGAGTTTCCTACATTAGAGGCAAATTCAAGAAGGACGACTAGTTGCCCAACTCCTTATGGGAGTCGGTGCACTTTACAGGGAACAAATACAGCTGATGCTTTGACTAGCCAGTAGGCGGCGCTGGTGACGCGACATTCATCTAAGACCGAAGAGCATCgtctgtcactttaagaccGTTTAATACACTGAATATTAATCAGACTAGCATGTCTTGCTAACAAGTTTTCGCCCGTGCAGTAAAGTGGCTCTGTTATATATGCCTGCCACGGCACGGAGTTTGAGTTAGCACAGTGAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU224427 True 452 lncRNA 0.47 2 10783638 10784242

Neighbor

gene id symbol gene type direction distance location
mbd3b mbd3b,LOC107676983,LOC107586384,LOC107719585,LOC107655167,LOC107729711 coding downstream 360 10776474 ~ 10783278 (-)
si:dkey-110c1.10 si:dkey-110c1.10,LOC107719586,LOC107586382,LOC107729664 coding downstream 7403 10760372 ~ 10776235 (-)
btbd2a btbd2,btbd2a,LOC107719589,LOC107675907,LOC107586379,LOC107655211,LOC108435919 coding downstream 68478 10710570 ~ 10715160 (-)
creb3l3a creb3l3a,LOC107675914,LOC107719590,LOC107729712,LOC107586456,LOC107655213,LOC107596868 coding downstream 81064 10696357 ~ 10702574 (-)
rxfp3.2b rxfp3.2b,LOC107729713,LOC107719591,LOC107675915,LOC107586455,LOC107596869,LOC107655214,LOC108435892 coding downstream 90860 10689006 ~ 10692778 (-)
tcf3b tcf3,LOC107596874,LOC107676964,LOC107719584 coding upstream 636 10784878 ~ 10806576 (-)
zbtb7a LOC107729681,LOC107586386,LOC107719583 coding upstream 31871 10816113 ~ 10834215 (-)
map2k2a map2k2a,LOC107586388,LOC107729695,LOC107655207,LOC107596877,LOC108430106 coding upstream 51430 10835672 ~ 10843376 (-)
pias4a pias4a,LOC107586389,LOC107655204,LOC107596878,LOC107676972 coding upstream 59563 10843805 ~ 10852179 (-)
atp8b3 atp8b3,LOC107676946 coding upstream 107855 10892097 ~ 10907021 (-)
G151616 NA non-coding downstream 67681 10715425 ~ 10715957 (-)
G151612 NA non-coding downstream 73888 10709202 ~ 10709750 (-)
G151572 NA non-coding downstream 328007 10455371 ~ 10455631 (-)
G151569 NA non-coding downstream 340900 10442487 ~ 10442738 (-)
G151508 NA non-coding downstream 407678 10375641 ~ 10375960 (-)
G151702 NA non-coding upstream 146640 10930882 ~ 10932509 (-)
G151704 NA non-coding upstream 148752 10932994 ~ 10933421 (-)
G151762 NA non-coding upstream 259755 11043997 ~ 11046227 (-)
LOC122327759 NA non-coding upstream 371545 11155787 ~ 11159729 (-)
G151774 crlf1b,LOC107676985,LOC107729674,LOC107719637,LOC107577518 non-coding upstream 392321 11176563 ~ 11179432 (-)
micos13 si:dkey-78l4.14,LOC107596903,LOC107719663,LOC107586453,LOC107675912,LOC107655188 other downstream 361284 10419127 ~ 10422354 (-)
polrmt LOC107687709,LOC107728563,LOC107569934,LOC107655172,LOC107719647,LOC107569035,LOC101483880 other downstream 461975 10282022 ~ 10321663 (-)
G151425 NA other downstream 800491 9957811 ~ 9983147 (-)
gpx4a gpx4a,LOC108429535 other downstream 1280632 9498669 ~ 9503006 (-)
nfia nfia,LOC107592693,LOC107599440,LOC107653654 other downstream 1611707 9013548 ~ 9171931 (-)
oaz1a oaz1a,oaz1s,oaz1,LOC107719576,LOC107655198,LOC107586434 other upstream 150810 10935052 ~ 10994952 (-)
rex1bd si:ch211-87h14.3,clg08h19orf60,cssa23h19orf60,LOC107676986,LOC107729673,LOC107593355,LOC107719569,LOC108439285,LOC103025814 other upstream 389901 11174143 ~ 11188692 (-)
cks2 cks2,LOC107699408,LOC107593315,LOC107729701,LOC103026129,LOC108230759,LOC105927846,LOC106584418 other upstream 445732 11229974 ~ 11231249 (-)
gna11a LOC107717982,LOC107676956,LOC107586405,LOC107699416,LOC107719558 other upstream 681610 11465852 ~ 11490654 (-)
LOC122327290 LOC107655377,LOC107755342,LOC107565170,LOC107659327 other upstream 1009331 11793573 ~ 11804698 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G160263 NA non-coding CI01000030 null 3657035 ~ 3658720 (-)