G151773


Basic Information

Item Value
gene id G151773
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 11184230 ~ 11185919 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU224564
ccaGATCTGCTGAAGGCAAATGATAGATCTGGGTAAGAAACAATTATTCGCTGGTTCAGTTGAAGCCGAGAAGAAACACTGGATCAGCTGATTCATTAACAAGATCTGACACGAATAAACAATTCATTTATAACATTGATAATTCTACCAGAAATGAAGTGAAGAGTGTCAGATGGATcaattttatgatgcttttgttcattttggagtttttttgGCATTAGTTTCCATGAAGTAACTAAGTATCGTAGTTAGTTGTTTTTTAAGTAGCAACGTAATATTGCTCATTTAGTTTGAAACATCAGTAAGCTGTAAATGtccttgtttttcatttttataacctAAGTCTTCTGAGGCCATGTGATAGTTTTGTGTCAGAAACAGTTATTCAGTGAAGTCGATCTAACTCGATATTTATTAACAACTCGGTCAGATAAGTTTCATTCATTTACGACTTTACTAGTTTTTCAGTGAACAATGACTTAAAGCCATCTGACCCTCCTTAGACAGCAACACGACTcaaatgttcccaggtccagaaatctagtaaatacattggtaaaacagGATGTAATGATAAACAAAACTCAGCCGCTCTTCTCCCGAGTTAtgtcttctgccattttagagagtattaCAACGCACACGCAAATACGTTAAAGTGTGCGTATGCTTTACATTGTAAAACTCTCAAAAATGGCAGAAGACGTAACTCGGGAGTataaagctacgagaatactttttgtgcgcgaagaaaataaaaataacattattgtaTAGAGTCATTATTTTGTTGTCTCACTTGGATTACTGTAACAATCTCCTTGCCAGATTCCTGAGCTTTGGTTGTGTAAGGATCCTTGCCGTCTAATAAGGGTCAGAAAACTctcatatttaatcaaaaatatcttattttgcgttccaaagatgaacaaagttcttacagatttggaacgaTATGTGAAGGtgagtttttgggtgaactatccctttaaatttcaatatgtctttaaaaaaattgtatgattTCAGAAGATTTGGGACATAGTGATAAATGGACtattttatgatacttttacGGTGCTTTTGTTTATTCTGGACCATCCGCAGCATCAGTccttgtttaatttttttaaagtaactcacttttaaagattaatatttaaatgctcaTATTTTGTTGTCGCTTACGAATTCTCCCTTTCAGCAAATTAGtttgtaaattttttattattatttttttctccaatcGTTGAGTTGCAAAGgttcttttttttggatgaaaggTCAATCAGAAAGAGAGAATGCCCTATTATCttctttcttaaaaacattttatgctcTCTCGTAATTTGGAGTCtttctttatgttttaatgcCCTTATAAATAACATTGTCTGAGACAAAAGCGTGCTTCCTTTGACGTGTTTGATGGGGACTGCAGCAGGAGGCAAACAGTAGATCATGTCACCAAACGACAGGCTCCTTGCAGATCCCTTTAGACAGTCTCGGCTCGTCCCAAATGAAAGTCCCAAGCACTGGAGAGTGATAAAAACCTTGTCATCGCAGGCCCCCGCAAACTCTCCCAAGCCTTCTTTAGAGTTTCACTATGATTTACCGCTTTGTAGTACCTGAAAGGCAAGACAATGGCATTTACAAGTGAATGTGATGAGTTGATATATGAGGACAG

Function

GO:

id name namespace
GO:0018130 heterocycle biosynthetic process biological_process
GO:0006351 transcription, DNA-templated biological_process
GO:0090304 nucleic acid metabolic process biological_process
GO:1901576 organic substance biosynthetic process biological_process
GO:0097659 nucleic acid-templated transcription biological_process
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:1901362 organic cyclic compound biosynthetic process biological_process
GO:0044237 cellular metabolic process biological_process
GO:0044249 cellular biosynthetic process biological_process
GO:0044260 cellular macromolecule metabolic process biological_process
GO:0071704 organic substance metabolic process biological_process
GO:0043170 macromolecule metabolic process biological_process
GO:0009987 cellular process biological_process
GO:0032774 RNA biosynthetic process biological_process
GO:0019438 aromatic compound biosynthetic process biological_process
GO:0034654 nucleobase-containing compound biosynthetic process biological_process

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU224564 True 1690 lncRNA 0.36 1 11184230 11185919

Neighbor

gene id symbol gene type direction distance location
tmem59l tmem59l,LOC107719570,LOC107676980,LOC107729706,LOC107699406,LOC108439280 coding downstream 8235 11162617 ~ 11175995 (-)
ssbp4 ssbp4,LOC107719571,LOC107676978,LOC107729707 coding downstream 55560 11077596 ~ 11128670 (-)
fkbp8 fkbp8,LOC107676977,LOC107719572,LOC107699404,LOC107729668,LOC107586436 coding downstream 108577 11062765 ~ 11075653 (-)
ell ell,LOC107729685,LOC107719573,LOC107655162,LOC107586435 coding downstream 123159 11031722 ~ 11061071 (-)
dot1l dot1l,LOC107719574,LOC107655195,LOC107586394,LOC107729667 coding downstream 156117 11003059 ~ 11028113 (-)
ankrd24 ankrd24,LOC107729675,LOC107719567 coding upstream 64069 11249988 ~ 11266155 (-)
s1pr3a s1pr3a,LOC107676952,LOC107719654,LOC107729679,LOC107593356,LOC107699398,LOC107586462 coding upstream 115646 11301565 ~ 11305187 (-)
trnaq-uug_21 NA coding upstream 162461 11348380 ~ 11348451 (-)
tle2b si:dkey-42p8.3,LOC107719559,LOC107676970,LOC107699414,LOC108271164,LOC108430094 coding upstream 196274 11382193 ~ 11426081 (-)
tle5 aes,LOC107586404,LOC107593322,LOC107699415,LOC108430095,LOC108271216 coding upstream 254297 11440216 ~ 11465075 (-)
G151775 NA non-coding downstream 3840 11179922 ~ 11180390 (-)
G151774 crlf1b,LOC107676985,LOC107729674,LOC107719637,LOC107577518 non-coding downstream 4798 11176563 ~ 11179432 (-)
LOC122327759 NA non-coding downstream 24501 11155787 ~ 11159729 (-)
G151762 NA non-coding downstream 138003 11043997 ~ 11046227 (-)
G151704 NA non-coding downstream 250809 10932994 ~ 10933421 (-)
G151858 NA non-coding upstream 111306 11297225 ~ 11297463 (-)
G151870 NA non-coding upstream 186210 11372129 ~ 11378059 (-)
LOC122327760 NA non-coding upstream 304754 11490673 ~ 11492960 (-)
G151889 NA non-coding upstream 323481 11509400 ~ 11518141 (-)
G151893 NA non-coding upstream 336111 11522030 ~ 11523422 (-)
oaz1a oaz1a,oaz1s,oaz1,LOC107719576,LOC107655198,LOC107586434 other downstream 189278 10935052 ~ 10994952 (-)
micos13 si:dkey-78l4.14,LOC107596903,LOC107719663,LOC107586453,LOC107675912,LOC107655188 other downstream 761876 10419127 ~ 10422354 (-)
polrmt LOC107687709,LOC107728563,LOC107569934,LOC107655172,LOC107719647,LOC107569035,LOC101483880 other downstream 862567 10282022 ~ 10321663 (-)
G151425 NA other downstream 1201083 9957811 ~ 9983147 (-)
gpx4a gpx4a,LOC108429535 other downstream 1681224 9498669 ~ 9503006 (-)
cks2 cks2,LOC107699408,LOC107593315,LOC107729701,LOC103026129,LOC108230759,LOC105927846,LOC106584418 other upstream 44055 11229974 ~ 11231249 (-)
gna11a LOC107717982,LOC107676956,LOC107586405,LOC107699416,LOC107719558 other upstream 279933 11465852 ~ 11490654 (-)
LOC122327290 LOC107655377,LOC107755342,LOC107565170,LOC107659327 other upstream 607654 11793573 ~ 11804698 (-)
LOC122327182 NA other upstream 655669 11841588 ~ 11845142 (-)
si:ch211-117l17.6 LOC107655409,LOC107715709,LOC107560696 other upstream 859550 12045469 ~ 12049538 (-)

Expression


Co-expression Network