G151774 (crlf1b,LOC107676985,LOC107729674,LOC107719637,LOC107577518)


Basic Information

Item Value
gene id G151774
gene name crlf1b,LOC107676985,LOC107729674,LOC107719637,LOC107577518
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 11176563 ~ 11179432 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU224565
CGTAACTACGGCAATCTCCCATTTCCATTGTTGTTTGCAATGGACATGCTCcactgctgtgttttttaaTCAAGCTTACCTTTAGGGCAAAGCCAATCATGGAGAATTCCAAAGCTTATTGTTTCAGAAGATGAGGAAATGAGGCCTTAAAGATGTAGTAATATAATATCTTCACTTTTCTTAACAAAAAATGCTGATTGATGGATGTagtttaattgtgattaattccATTAATGCATTGATATGTCAAGTAAGTGATTTGATTTACAATTTTAACCAATTGCCAACAGATTCTCAGCTGCCAATTGACCTTTAAAGTACTATTTTCACAAGTTGCCTTTTGGAAATGTTTCAGCTGTTGGAAAGTGTTTTTACAGTCTGTAAAAATCTTTTCACGTAGACGAGTGTGTGGACCATATGCCAGACATTCAGATggttttgtgcatttatgtgCAAGTAAGCGAGAAGTTATCCCAAGTCACCTTGATCTCAACCGCAATTTTTTTCCACCAAACTAGCATATTTTAGTTACTTACCTACATCTAAAATGTCTAAGGTGATCACATCAGAAGTGGCAGAGCCAAGCTGATTGGACCCCTCCACCCAAACTTCATATGGTGTAAAAATGGCAAGGTCGCGAGGAACGTAGCACGTATACAGCTGTCCTGTGTAGTCCTCGCAGTCTTTCTCTTTACCGTACCATCTAGATGGTTGTTAAAATGGAagatttgcatataaaaaagtatagttGCCAAACAAGTGTCGGTATAAAGCTTTTTGGTGTCAAAACCTCACTTTAGTTTGTACTTGAggatatatttagtatttatgaATGTCTCTCCTTGACTTCCCGGACTCCATCTGCAGCTGAGATCCTTGGTGTTTCGTGACCAACATGTCAGGTTGATGGGTTTCTCAGGGGGCGCTATAtgtcaaattaaagtaaaataagagGACAGCATGAATATTCAGAAacatatggcaaaaaaaagctGGAAGTGTTCACAAACTCACAGCCAACATAAAGACATGATCCAGCCAACACTTCTCCGTTGCTTCGATGGCAAACCAGGTTGTCTCCTGACCGCTGCAAGGAGCCATTGAGTTGATGGAGTGTGACGCTGGATTCGGTCGAGCTGAGGACCTTATAAGTGTTTCTAGCCAAGCGTTTTCCATTCAGCGTCCAGTACAAGGATCTAGCTGTTATTTCCAGCTCGGCGCTAATGGTGCACACCGCAGTCATGCTCGAGCCTATGTGAAGCACTGGATCCTGGGGGGATATGACGGCCAAGTCTGGGGGTCAGAAGAAGAGGAGATTTCATGATTCCTGCAATTTTACAACTGGATTTATGGCCGCAGTTGGAAAGGTCGAACAAGGTCATTTTTCAGCAACTTAAGTGGTTTTCCATCTTGTAAATATTCGCCTTGTGTGTCCGCAGAgctcatatttattcatgtttaaggGAACTGTTCAGTGGGAACAATGGCCGGATTTGAAGAGCTACTACTGGCCTTCGGGGAAACAGTGTTGATGCAGATCATTTCTGCTCCTGGTGGGAGGTGGACAAACTCTTTAACATGTGCCGCTGGACAGCAAGGAACACTGAAGATTTGGGAAACCAGACtgaataattaatgtataaacTATAGTACTGAAAGTGTTAGGAAAGATTTACCTTTTTGGGCTCTTTTAATCCTTTGTTTGGTTGGAAAAACTGATGAATCAAAGAAAACTGACCAGTGAATGACAGTTCTATTCACAGTCATTTTTCTATCATGTAGTTTTCATCTGTTCTTGCGAAGGATGTGGAACTTAATgagtttgctttttaaataaatgataatcttgttttataaaatcaatacaCAAGTTCTTTTACTTTAGGTTTTCCCGGTTATTAATGCACAGTTATTATCCCATTATAGATCTATTTGCATCTTACAGTCATGTCTTTACACACTTTGGCATTCATTTCTTCCAAAGTGCTGTAAACGATCACAAGGTCGCCTTTAAACAATACGAGAAGTTTTCAGAACATTTCTGTCGTTTTTCTTTTGCAAAGCCTCATCGCTAATGACAAGTTGCCTCAGTTAAAACGAATAAATCTTTCCTAACTTTTGAATTTTACCGTAAACTAAGACAGACACGACCTCTGAATTGACAAACGTGAGCAAGAGATGAAAACACAGCTAAACGCCTCCAAAAAGATCTTTAAGTGTAGACGAGACGTTTGTAGACATCTTCTAAAATGACATTACTTCAAATACACTTGAAATTCTACTTACGTGCTGTAAGCGCATATGGAAGAAGCGccacaaaaaacaacataatgacTAAAATTGTCATTTGTCTGCCGCGCGCGCGCTCAACTCGATTCTTGTCATACTGGTGGGAGCGCGCGCACGCATAATCCATTCTCCTCCACATAAattgttgaaaatgaaaagcctCGATCACCAGAAAGCTTCGTAAAAATCATTGCTGGTTTCGGAAAGCACCATTGTGCGGAGAGGACGCTCGGATTTACCTTCACTCACTTATTTTTTGGAGGAGAATCAATATAGCGCACGCCTCAAAAGCTGAAAAAGTTGATTCTTCTCAAGCTCCTCCCATGTCTTACCACACAGCCACAAGTCATTATTAGTAGCGCATCTGCAGccagtgttttcttttctttttgtatacTAAGTTGGCCAcaagagaaaataatgaaacaaaccCTTCCCAAAATCCTTCCTTTTTGTATTTGTCTGCTGTTCCTCACGAAACAGATGTAGGCTGCATATGAAGTTTGTTCTACAGCAAATACACACGATTATTTTGTGTCTACATATTTATAATGGCATGTTTCGTGCAGTGCAGCTCCACA

Function

symbol description
crlf1b Predicted to enable cytokine binding activity and cytokine receptor activity. Predicted to be involved in cytokine-mediated signaling pathway and positive regulation of tyrosine phosphorylation of STAT protein. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of CRLF-CLCF1 complex and receptor complex. Predicted to be active in external side of plasma membrane. Human ortholog(s) of this gene implicated in cold-induced sweating syndrome 1. Orthologous to human CRLF1 (cytokine receptor like factor 1).

NR:

description
PREDICTED: cytokine receptor-like factor 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU224565 True 2870 lncRNA 0.40 1 11176563 11179432

Neighbor

gene id symbol gene type direction distance location
tmem59l tmem59l,LOC107719570,LOC107676980,LOC107729706,LOC107699406,LOC108439280 coding downstream 568 11162617 ~ 11175995 (-)
ssbp4 ssbp4,LOC107719571,LOC107676978,LOC107729707 coding downstream 47893 11077596 ~ 11128670 (-)
fkbp8 fkbp8,LOC107676977,LOC107719572,LOC107699404,LOC107729668,LOC107586436 coding downstream 100910 11062765 ~ 11075653 (-)
ell ell,LOC107729685,LOC107719573,LOC107655162,LOC107586435 coding downstream 115492 11031722 ~ 11061071 (-)
dot1l dot1l,LOC107719574,LOC107655195,LOC107586394,LOC107729667 coding downstream 148450 11003059 ~ 11028113 (-)
ankrd24 ankrd24,LOC107729675,LOC107719567 coding upstream 70556 11249988 ~ 11266155 (-)
s1pr3a s1pr3a,LOC107676952,LOC107719654,LOC107729679,LOC107593356,LOC107699398,LOC107586462 coding upstream 122133 11301565 ~ 11305187 (-)
trnaq-uug_21 NA coding upstream 168948 11348380 ~ 11348451 (-)
tle2b si:dkey-42p8.3,LOC107719559,LOC107676970,LOC107699414,LOC108271164,LOC108430094 coding upstream 202761 11382193 ~ 11426081 (-)
tle5 aes,LOC107586404,LOC107593322,LOC107699415,LOC108430095,LOC108271216 coding upstream 260784 11440216 ~ 11465075 (-)
LOC122327759 NA non-coding downstream 16834 11155787 ~ 11159729 (-)
G151762 NA non-coding downstream 130336 11043997 ~ 11046227 (-)
G151704 NA non-coding downstream 243142 10932994 ~ 10933421 (-)
G151702 NA non-coding downstream 244054 10930882 ~ 10932509 (-)
G151668 NA non-coding downstream 392321 10783638 ~ 10784242 (-)
G151775 NA non-coding upstream 490 11179922 ~ 11180390 (-)
G151773 NA non-coding upstream 4798 11184230 ~ 11185919 (-)
G151858 NA non-coding upstream 117793 11297225 ~ 11297463 (-)
G151870 NA non-coding upstream 192697 11372129 ~ 11378059 (-)
LOC122327760 NA non-coding upstream 311241 11490673 ~ 11492960 (-)
oaz1a oaz1a,oaz1s,oaz1,LOC107719576,LOC107655198,LOC107586434 other downstream 181611 10935052 ~ 10994952 (-)
micos13 si:dkey-78l4.14,LOC107596903,LOC107719663,LOC107586453,LOC107675912,LOC107655188 other downstream 754209 10419127 ~ 10422354 (-)
polrmt LOC107687709,LOC107728563,LOC107569934,LOC107655172,LOC107719647,LOC107569035,LOC101483880 other downstream 854900 10282022 ~ 10321663 (-)
G151425 NA other downstream 1193416 9957811 ~ 9983147 (-)
gpx4a gpx4a,LOC108429535 other downstream 1673557 9498669 ~ 9503006 (-)
cks2 cks2,LOC107699408,LOC107593315,LOC107729701,LOC103026129,LOC108230759,LOC105927846,LOC106584418 other upstream 50542 11229974 ~ 11231249 (-)
gna11a LOC107717982,LOC107676956,LOC107586405,LOC107699416,LOC107719558 other upstream 286420 11465852 ~ 11490654 (-)
LOC122327290 LOC107655377,LOC107755342,LOC107565170,LOC107659327 other upstream 614141 11793573 ~ 11804698 (-)
LOC122327182 NA other upstream 662156 11841588 ~ 11845142 (-)
si:ch211-117l17.6 LOC107655409,LOC107715709,LOC107560696 other upstream 866037 12045469 ~ 12049538 (-)

Expression


Co-expression Network