LOC122327182


Basic Information

Item Value
gene id LOC122327182
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 11841588 ~ 11845142 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU224862
CACACAGAGACCAAAATCAGAAAACAGAATAGTTTGTGAACTGAGCAGAAAATGAGAGGCTCCGTACAAATCATTCGTTTTCGTCCTGTTTTCTGTTACCTCTGTGCAAAGTCAAGAATGCCTTCGAGAGGACATTATCTACGACAACACAGAGCTAGTTGAGAAAGCGTCATACGATGATGGTCAAATAGTGAGAGTGAACTGCATTACGGGTTATATCGgcttgtaaaattaaaatgcgaAAAAGGAACATGGAAGGAGTCTATTAAGCGATCATGTGCAAAGAGGACATGTGGTCATCCAGGCGATGAACCAAATGCTGAGTTTATACTTGCAGACGAGAcagagtttgtttttggagCAACAGTGGTGTACACTTGCAAGAAAagGTATTATATGACAAGCAAAATCAATTATCGTACCTGCAAAAGTGAAGGATGGAGCAATACTGTCCTTGTCTGTGAGGAAGTAACTTGTGAGCTGAAGACAACTAAATTAGGAGTAATCAGCATCTATCCAGAGGGGAAAACTATTTTCAAAGCTGGAGAGAAAGTGATGATTACCTGCTCTGAGAGACACTGGCtcatttttacaaaagaaacCAGCAAATTATTCACGTGCCTAAATAGTGGAGATTGGGATCACATGACTGAGTGTGCAGCGGTTACTTTAGAAGAGATTTGAGACTTGGagtgaaaaaaacatacagatgTGAGTCTGGATATCGTGAAACAGCAAAAGAAGCAACATGTACACGAGACGGATGGACACCAAACCCACTGTGTGCTGttgcttattagtgtAGCGTGTCTGTACACGAAGACAACACAAGGATGAGATCCAGCCCTGGTTTTAATCTGATCAGTGAATCGCAGGCGACAGAGGCACGTACAGG
>TU224864
CACACAGAGACCAAAATCAGAAAACAGAATAGTTTGTGAACTGAGCAGAAAATGAGAGGCTCCGTACAAATCATTCGTTTTCGTCCTGTTTTCTGTTACCTCTGTGCAAAGTCAAGAATGCCTTCGAGAGGACATTATCTACGACAACACAGAGCTAGTTGAGAAAGCGTCATACGATGATGGTCAAATAGTGAGAGTGAACTGCATTACGGGTTATATCGgcttgtaaaattaaaatgcgaAAAAGGAACATGGAAGGAGTCTATTAAGCGATCATGTGCAAAGAGGACATGTGGTCATCCAGGCGATGAACCAAATGCTGAGTTTATACTTGCAGACGAGAcagagtttgtttttggagCAACAGTGGTGTACACTTGCAAGAAAagGTATTATATGACAAGCAAAATCAATTATCGTACCTGCAAAAGTGAAGGATGGAGCAATACTGTCCTTGTCTGTGAGGAAGTAACTTGTGAGCTGAAGACAACTAAATTAGGAGTAATCAGCATCTATCCAGAGGGGAAAACTATTTTCAAAGCTGGAGAGAAAGTGATGATTACCTGCTCTGAGAGACACTGGCtcatttttacaaaagaaacCAGCAAATTATTCACGTGCCTAAATAGTGGAGATTGGGATCACATGACTGAGTGTGCAGGTaaaattaaagagaaatgttattttatgcacttttttatgttgttataaaaaaatttaatcttgtTTCAGAGATTAGTTGTGAAGTTCCACATAATCAGCATGTGTATTATCCAAGCGGTTACTTTAGAAGAGATTTGAGACTTGGagtgaaaaaaacatacagatgTGAGTCTGGATATCGTGAAACAGCAAAAGAAGCAACATGTACACGAGACGGATGGACACCAAACCCACTGTGTGCTGttgcttattagtgtAGCGTGTCTGTACACGAAGACAACACAAGGATGAGATCCAGCCCTGGTTTTAATCTGATCAGTGAATCGCAGGCGACAGAGGCACGTACAGG
>XM_043222365.1
TGGTCAAATAGTGAGAGTGAACTGCATTACGGGTTATATCGgcttgtaaaattaaaatgcgaAAAAGGAACATGGAAGGAGTCTATTAAGCGATCATGTGCAAAGAGGACATGTGGTCATCCAGGCGATGAACCAAATGCTGAGTTTATACTTGCAGACGAGAcagagtttgtttttggagCAACAGTGGTGTACACTTGCAAGAAAagGTATTATATGACAAGCAAAATCAATTATCGTACCTGCAAAAGTGAAGGATGGAGCAATACTGTCCTTGTCTGTGAGGAAGTAACTTGTGAGCTGAAGACAACTAAATTAGGAGTAATCAGCATCTATCCAGAGGGGAAAACTATTTTCAAAGCTGGAGAGAAAGTGATGATTACCTGCTCTGAGAGACACTGGCtcatttttacaaaagaaacCAGCAAATTATTCACGTGCCTAAATAGTGGAGATTGGGATCACATGACTGAGTGTGCAGAGATTAGTTGTGAAGTTCCACATAATCAGCATGTGTATTATCCAAGCGGTTACTTTAGAAGAGATTTGAGACTTGGagtgaaaaaaacatacagatgTGAGTCTGGATATCGTGAAACAGCAAAAGAAGCAACATGTACACGAGACGGATGGACACCAAACCCACTGTGTGCTGttgcttattagtgtAGCGTGTCTGTACACGAAGACAACACAAGGATGAGATCCAGCCCTGGTTTTAATCTGATCAGTGAATCGCAGGCGACAGAGGCACGTACAGG

Function

GO:

id name namespace
GO:0061134 peptidase regulator activity molecular_function
GO:0061135 endopeptidase regulator activity molecular_function
GO:0030414 peptidase inhibitor activity molecular_function
GO:0004857 enzyme inhibitor activity molecular_function
GO:0004866 endopeptidase inhibitor activity molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU224862 False 895 lncRNA 0.42 7 11841588 11845142
TU224864 True 1012 lncRNA 0.40 6 11841588 11845142
XM_043222365.1 False 761 mRNA 0.42 6 11841588 11844852

Neighbor

gene id symbol gene type direction distance location
LOC122327288 capn2b,LOC107565172,LOC107659328,LOC107722663,LOC107655378,LOC107755344 coding downstream 26010 11804815 ~ 11815578 (-)
LOC122327734 celf5a,celf5,LOC107675909 coding downstream 190766 10467127 ~ 11650822 (-)
LOC122327726 LOC107719667,LOC107699403,LOC107593325,LOC107676991,LOC107717979,LOC107586464,LOC100332608,LOC108270593 coding downstream 269910 11567017 ~ 11571678 (-)
tle5 aes,LOC107586404,LOC107593322,LOC107699415,LOC108430095,LOC108271216 coding downstream 376513 11440216 ~ 11465075 (-)
tle2b si:dkey-42p8.3,LOC107719559,LOC107676970,LOC107699414,LOC108271164,LOC108430094 coding downstream 415507 11382193 ~ 11426081 (-)
LOC122327836 NA coding upstream 724 11845866 ~ 11855677 (-)
LOC122327835 NA coding upstream 17653 11862795 ~ 11870285 (-)
rgs2 LOC107741538,LOC107564933,LOC107664962,LOC107560697,LOC107735525 coding upstream 185320 12030462 ~ 12032362 (-)
si:ch211-117l17.5 LOC107655356,LOC107715708,LOC107741540,LOC107564934,LOC107664973 coding upstream 195134 12040276 ~ 12043067 (-)
LOC122327260 LOC107664925,LOC107741564,LOC107655340,LOC107715693,LOC107564927,LOC107560680 coding upstream 205537 12050679 ~ 12053495 (-)
G151919 NA non-coding downstream 251665 11587661 ~ 11589923 (-)
G151904 NA non-coding downstream 290718 11550198 ~ 11550870 (-)
G151896 NA non-coding downstream 310978 11528098 ~ 11530610 (-)
G151893 NA non-coding downstream 318166 11522030 ~ 11523422 (-)
G151889 NA non-coding downstream 323447 11509400 ~ 11518141 (-)
G152223 NA non-coding upstream 147571 11992713 ~ 11993033 (-)
LOC122327268 NA non-coding upstream 147981 11993123 ~ 11997045 (-)
G152234 NA non-coding upstream 180970 12026112 ~ 12026795 (-)
LOC122327264 NA non-coding upstream 231599 12076741 ~ 12080117 (-)
LOC122327175 NA non-coding upstream 238365 12083507 ~ 12086914 (-)
LOC122327290 LOC107655377,LOC107755342,LOC107565170,LOC107659327 other downstream 36890 11793573 ~ 11804698 (-)
gna11a LOC107717982,LOC107676956,LOC107586405,LOC107699416,LOC107719558 other downstream 350934 11465852 ~ 11490654 (-)
cks2 cks2,LOC107699408,LOC107593315,LOC107729701,LOC103026129,LOC108230759,LOC105927846,LOC106584418 other downstream 610339 11229974 ~ 11231249 (-)
rex1bd si:ch211-87h14.3,clg08h19orf60,cssa23h19orf60,LOC107676986,LOC107729673,LOC107593355,LOC107719569,LOC108439285,LOC103025814 other downstream 652896 11174143 ~ 11188692 (-)
oaz1a oaz1a,oaz1s,oaz1,LOC107719576,LOC107655198,LOC107586434 other downstream 846636 10935052 ~ 10994952 (-)
si:ch211-117l17.6 LOC107655409,LOC107715709,LOC107560696 other upstream 200327 12045469 ~ 12049538 (-)
G152276 wdr47,wdr47b,LOC107741541,LOC107664763,LOC107564929,LOC107715726,LOC107655405 other upstream 297700 12142842 ~ 12145575 (-)
polr3f polr3f,LOC107655353,LOC107715715 other upstream 512541 12357683 ~ 12363395 (-)
LOC122328185 pdgfa,LOC107655387,LOC107716439,LOC107659307 other upstream 715701 12560843 ~ 12568727 (-)
cxcl12b cxcl12b,LOC107566036,LOC107755354,LOC108440693,LOC107659313,LOC107566675 other upstream 1060991 12906133 ~ 12914243 (-)

Expression


Co-expression Network