LOC122327168


Basic Information

Item Value
gene id LOC122327168
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 13017243 ~ 13028266 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU225233
CTGCTCAAATAGTAACAAACCTAAGTCATGGCAACATTTTGAAGACTCACTGACAGCAAGAATATGAGACGCCATTCAGAGAAACATTTCAACTTGAGGATCAGAATCCAGAATACCGTTTTTATCGTTGCTGATTAAAGGAAGCTTCTCTCTCATACTTATTTTCTCTGCAAGTCAAATTAAGGGCGTCAATGGAACATCTGCATTCTGCTGATAAGATTGAGAtttgaaaaatgctgtaaagtgagaatgttttttttttgtttgtttagttttgtgaaACATGCGCTAACACACATAACTATATGTTCACATGACAGTATGACAGTATGACAGTAGTCGAGAATATTATTGAATAAATGACTGTATCAATTACATGCATCTTCATTGTTTACTAGTAtaactgaaatgtttaatttcttaaaGTGTCTTGCCTTAAAGATCTCTGGAATTTGGTAAGTGATCTGTAAACAGTAATGGATGGTCGGTATTTGATGATGATTGGTTGGTATTCGTCTCTAAACAAATGAACCCGCCCTTCATTGGAGTCATTCACCTCTGTTAACCTCAGTTACGCTACATAAGTAATATATGTGAAACCTCAaacataatgttatttttggttCCATTTCCAGTTTTTAAgctatttgtataaaaataaaaataaaaacttgtgtgtgtgtgtgtgtttttttgtgatatcCTGTAAAAAGCATACTGAGGATTTTCTGTTAGGATTgggaataaaattaatttgttactCACTGATTATTTATATCTGAACTATTTCTCAAGTCATTAAAATCCTCTGATTTCTCTGAACTTCTTTTATCTGTTATTGACTGT
>XR_006247613.1
CCTAAGTCATGGCAACATTTTGAAGACTCACTGACAGCAAGAATATGAGACGCCATTCAGAGAAACATTTCAACTTGAGGATCAGAATCCAGAATACCGTTTTTATCGTTGCTGATTAAAGGAAGCTTCTCTCTCATACTTATTTTCTCTGCAAGTCAAATTAAGGGCGTCAATGGAACATCTGCATTCTGCTGATAAGATTGAGAtttgaaaaatgctgtaaagtgagaatgttttttttttgtttgtttagttttgtgaaACATGCGCTAACACACATAACTATATGTTCACATGACAGTATGACAGTATGACAGTAGTCGAGAATATTATTGAATAAATGACTGTATCAATTACATGCATCTTCATTGTTTACTAGTAtaactgaaatgtttaatttcttaaaGTGTCTTGCCTTAAAGATCTCTGGAATTTGGTAAGTGATCTGTAAACAGTAATGGATGGTCGGTATTTGATGATGATTGGTTGGTATTCGTCTCTAAACAAATGAACCCGCCCTTCATTGGAGTCATTCACCTCTGTTAACCTCAGTTACGCTACATAAGTAATATATGTGAAACCTCAaacataatgttatttttggttCCATTTCCAGTTTTTAAgctatttgtataaaaataaaaataaaaacttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU225233 True 846 lncRNA 0.33 2 13017243 13028266
XR_006247613.1 False 655 lncRNA 0.33 2 13017262 13028094

Neighbor

gene id symbol gene type direction distance location
si:dkey-246e1.3 NA coding upstream 60935 12950609 ~ 12956308 (+)
tmem186 NA coding upstream 141909 12863320 ~ 12875334 (+)
slx4 LOC107755350,LOC107659319,LOC107566668 coding upstream 154566 12852441 ~ 12862677 (+)
crebbpa LOC107742089,LOC107655368,LOC107755349,LOC107566670,LOC107566050 coding upstream 165027 12813161 ~ 12852216 (+)
adcy9 adcy9,LOC107755348,LOC107566672,LOC107659321,LOC107655369,LOC107742090,LOC107566051 coding upstream 204632 12785825 ~ 12812611 (+)
LOC122327210 NA coding downstream 35037 13063303 ~ 13074913 (+)
senp7b LOC107717676,LOC107704544,LOC107704674,LOC107566043 coding downstream 174423 13202689 ~ 13226838 (+)
abi3bpb abi3bpb,LOC107566041,LOC107717674,LOC107704546,LOC107720343,LOC108436625 coding downstream 250105 13278371 ~ 13302756 (+)
tp53bp2b LOC107717669,LOC107704550,LOC107667887,LOC107602677 coding downstream 409921 13438187 ~ 13459632 (+)
pla2g6 pla2g6,LOC107667889,LOC107704553,LOC107602675 coding downstream 452280 13480546 ~ 13497225 (+)
G152161 NA non-coding upstream 46885 12901270 ~ 12970358 (+)
G152173 NA non-coding upstream 60452 12947902 ~ 12956791 (+)
G152142 LOC107569129,LOC107742087,LOC107655331,LOC107755334 non-coding upstream 224017 12754346 ~ 12793226 (+)
G152140 NA non-coding upstream 269287 12747581 ~ 12747956 (+)
G152122 NA non-coding upstream 360814 12655949 ~ 12656429 (+)
G152195 NA non-coding downstream 22684 13050950 ~ 13051829 (+)
G152196 NA non-coding downstream 27082 13055348 ~ 13055886 (+)
G152200 LOC107568072,LOC107694706,LOC107704533,LOC107755337,LOC107659310,LOC107704541,LOC107659300,LOC107580119,LOC107655326,LOC107731186 non-coding downstream 72794 13101060 ~ 13161699 (+)
LOC122327165 LOC107568072,LOC107694706,LOC107704533,LOC107575395,LOC107755337,LOC107659310,LOC107655326,LOC107711444,LOC107749630 non-coding downstream 72842 13101108 ~ 13106256 (+)
G152205 LOC107686478,LOC107670948 non-coding downstream 88172 13116438 ~ 13121691 (+)
G152065 LOC107716432,LOC107655331,LOC107575070,LOC107715704,LOC107570368,LOC107755334,LOC107659303 other upstream 593321 12409306 ~ 12423922 (+)
G152043 LOC107741571 other upstream 671493 12345206 ~ 12345750 (+)
G152032 NA other upstream 722526 12293400 ~ 12294717 (+)
LOC122327127 vtg6,LOC107563524,LOC107664867,LOC107715697,LOC107664873,LOC107741562,LOC107570371,LOC107734844,LOC107570369,LOC107664832,LOC107564925,LOC107563523,LOC107715728,LOC107655401,LOC107715731,LOC107655402,LOC107576112,LOC107570370,LOC107734958,LOC107579406 other upstream 740635 12010469 ~ 12276608 (+)
LOC122327156 NA other downstream 39148 13067414 ~ 13098756 (+)
LOC122327162 NA other downstream 79240 13107506 ~ 13112733 (+)
LOC122327212 NA other downstream 148161 13176427 ~ 13180275 (+)
G152558 col8a1b,LOC107717673,LOC107720377,LOC107704548,LOC107667898,LOC107602679,LOC107571642 other downstream 354887 13383153 ~ 13383777 (+)
baiap2l2b baiap2l2b,LOC107717666,LOC107704557,LOC107602661,LOC107559544,LOC107720338 other downstream 376576 13404842 ~ 13509252 (+)

Expression


Co-expression Network