G152276 (wdr47,wdr47b,LOC107741541,LOC107664763,LOC107564929,LOC107715726,LOC107655405)


Basic Information

Item Value
gene id G152276
gene name wdr47,wdr47b,LOC107741541,LOC107664763,LOC107564929,LOC107715726,LOC107655405
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 12142842 ~ 12145575 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU225397
ttttaatttatgaaatataaacaatataacaatattaataataaaaataaattaaacagtaCATTAACGGTGACAcaaattactttaaaacatttaaatgttaaaaataaataaaaataataataataataaatgtataagaATCAAGTCCCATAGTTTCAAAACTGTGTTTATTTCCATGttcaaataaatgactaatacattttttttttttacatcaggtGATTGAGAGAGTCCTCTTACTGTCCTCTGCATCGATACAAAAAAGTGCTGAATTTATGTGCAAAAGTGACgcatattatgcatataaatatatgcattaggAAAATGacaatccaaaataaaagcattcctaaaaatgcatgaaaccaTTTCAACAACACTGAGGACAGCGGCTTTCACAAAACTTTTACCCTCAGTATTAACGGAGCGTTGCTTCGCCTTTCAtccatttaaataaagacatgaatATTCATGCGGCATAAACGGCGTCTCAGTGAGTGAAGTCTATAGTGCAGTGTGCTATACAATGATTTAATAAGTTAGTGTTTACGCCTGTACAAAAGCTCATATTTACAAGACATTCAGTTCCAGAAGATGAACTACAGAAAACATCACCTCAAGGCACAGTTCAGCTCACATTTCCAGGACTGTTCCTTCACTTGAACTAGCAAAATACAGAAGCGATGCTACGCACGGCTTTTTTTCGTGTAAGTAAAAGAATCATTcgggctttttttcttttaaattgcaatatattttacaataaagctgtttttcttCCAGTAGACATGCAATTCCAGATGTAGACATGACTAGGATTGAGAAACAcacgttttttttccctcatgtGAGTATACTggagttacacacacacacacacacacacacacacacacacacagacacagacacgcacaaacacacacacacacacacagacacgacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacagacacacacacacacagacacacacagacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacagacacacacacacacacacacagacacacagacacacacagacacacacacacacacacagacacacacacacacacagacacacacacacagacacacacacacacacacagacacacacacacacagacacacacacacagacacacacactcctgtgtTTTCTGTGCTCTTGTGTTAGGGGTTAGGGCTGATTGGCCCAGAGCGTGACCGTCTTGTCGGCGGAGGAGGACAGGAAGGACAGGTCTCTGGTGTGCCAGCGGCACTGGATCACTTTATCAGCGTGTTCAGCGGCCGCCGTCACCGGCAGAGCTTTGATGGACTGGTACAAGAGGTTCTTggagagagagcagagaaagGAGCGAAGCTGATCCGTGTGGACCTACCCTGAAGGTCGGTGATCATGACCTTGTTGTCGTAGGAGCCGGTGAGCAGGTAGTGTGCTCCCGGAGAGAAGCGCACCGAGCGCACGTCACTGCTGTGTGGACGATACGCCTGGACGCTTCGGCCTCCTCTGATGTCATAAAGCATGCAGCGACAGTCCTCCAATCCGGTGGCCATGAGCCGCCCGCTGGGATCCACTGCCACCGACGCCACGGCACTTC

Function

symbol description
wdr47b Orthologous to human WDR47 (WD repeat domain 47).
wdr47 Predicted to be located in cytoplasm and microtubule.

NR:

description
PREDICTED: WD repeat-containing protein 47-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU225397 True 1706 TUCP 0.43 2 12142842 12145575

Neighbor

gene id symbol gene type direction distance location
uts2d NA coding downstream 87446 12054271 ~ 12055396 (-)
LOC122327260 LOC107664925,LOC107741564,LOC107655340,LOC107715693,LOC107564927,LOC107560680 coding downstream 89347 12050679 ~ 12053495 (-)
si:ch211-117l17.5 LOC107655356,LOC107715708,LOC107741540,LOC107564934,LOC107664973 coding downstream 99775 12040276 ~ 12043067 (-)
rgs2 LOC107741538,LOC107564933,LOC107664962,LOC107560697,LOC107735525 coding downstream 110480 12030462 ~ 12032362 (-)
LOC122327835 NA coding downstream 272557 11862795 ~ 11870285 (-)
LOC122327878 LOC107664873,LOC107570371,LOC107664867,LOC107570369,LOC107563524,LOC107655402 coding upstream 54425 12200000 ~ 12206631 (-)
LOC122327083 LOC107664867,LOC107570369,LOC107655402,LOC107570371,LOC107664873,LOC107563524 coding upstream 77912 12223487 ~ 12230101 (-)
LOC122327080 LOC107655402,LOC107664867,LOC107570371,LOC107664873,LOC107570369,LOC107563524 coding upstream 102604 12248179 ~ 12254746 (-)
LOC122327050 LOC107570370,LOC107664859,LOC107741528,LOC107664867,LOC107570371 coding upstream 114534 12260109 ~ 12268021 (-)
vtg8 LOC107715730 coding upstream 124553 12270128 ~ 12278886 (-)
LOC122327175 NA non-coding downstream 55928 12083507 ~ 12086914 (-)
LOC122327264 NA non-coding downstream 62725 12076741 ~ 12080117 (-)
G152234 NA non-coding downstream 116047 12026112 ~ 12026795 (-)
LOC122327268 NA non-coding downstream 145797 11993123 ~ 11997045 (-)
G152223 NA non-coding downstream 149809 11992713 ~ 11993033 (-)
G152300 NA non-coding upstream 145341 12290916 ~ 12291260 (-)
G152332 LOC107716433,LOC107659337,LOC107575798 non-coding upstream 265025 12410600 ~ 12419443 (-)
G152333 LOC107715704,LOC107655331,LOC107659303,LOC107570368 non-coding upstream 272783 12418358 ~ 12426088 (-)
G152339 NA non-coding upstream 281181 12426756 ~ 12426972 (-)
G152340 NA non-coding upstream 289006 12434581 ~ 12434956 (-)
si:ch211-117l17.6 LOC107655409,LOC107715709,LOC107560696 other downstream 93304 12045469 ~ 12049538 (-)
LOC122327182 NA other downstream 297700 11841588 ~ 11845142 (-)
LOC122327290 LOC107655377,LOC107755342,LOC107565170,LOC107659327 other downstream 338144 11793573 ~ 11804698 (-)
gna11a LOC107717982,LOC107676956,LOC107586405,LOC107699416,LOC107719558 other downstream 652188 11465852 ~ 11490654 (-)
cks2 cks2,LOC107699408,LOC107593315,LOC107729701,LOC103026129,LOC108230759,LOC105927846,LOC106584418 other downstream 911593 11229974 ~ 11231249 (-)
polr3f polr3f,LOC107655353,LOC107715715 other upstream 212108 12357683 ~ 12363395 (-)
LOC122328185 pdgfa,LOC107655387,LOC107716439,LOC107659307 other upstream 415268 12560843 ~ 12568727 (-)
cxcl12b cxcl12b,LOC107566036,LOC107755354,LOC108440693,LOC107659313,LOC107566675 other upstream 760558 12906133 ~ 12914243 (-)
si:dkey-222p3.1 NA other upstream 1052459 13198034 ~ 13202269 (-)
col8a1b col8a1b,col8a1,LOC107717673,LOC107602679,LOC107704548,LOC107571642,LOC107667898,LOC107720377,LOC108436628 other upstream 1234114 13379689 ~ 13409999 (-)

Expression


Co-expression Network