G152644


Basic Information

Item Value
gene id G152644
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 13802834 ~ 13803281 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU225956
ttttaatgcaaagttatttagatttgcgaaattcctatgtaaattaccatagtaggaaaaacacatgtgcatttttccctcaccatactatgtcaatggggcaactttggaggtctcttgccccccaggggtaaaacttttaccccactgtgtggtatgttctcgttcagcttgataaagtcttcaaatctggtgatttacaagtttgtgcgatattctcgctctgcgctacgatccgtcaaagtcggtcgcaatgttacgtctatgggatttttcgcccgatttttcgcccggtgtacgaaaatcgtacgcccgatcgcttataaaagtcatagcacatctttccacaataccccgcacgatttgacgcccgtttcaggggtgtgtggcaaaaactgcgggactagttacgcgccgaaATTTGAGTGGAATctataataagtaagaa

Function

GO:

id name namespace
GO:0042613 MHC class II protein complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU225956 True 448 lncRNA 0.44 1 13802834 13803281

Neighbor

gene id symbol gene type direction distance location
LOC122327135 LOC107704540,LOC107717663 coding upstream 254405 13541190 ~ 13548429 (+)
LOC122327695 ncf4,LOC107704554,LOC107667893,LOC107559542 coding upstream 263808 13517128 ~ 13539026 (+)
pla2g6 pla2g6,LOC107667889,LOC107704553,LOC107602675 coding upstream 305609 13480546 ~ 13497225 (+)
tp53bp2b LOC107717669,LOC107704550,LOC107667887,LOC107602677 coding upstream 343202 13438187 ~ 13459632 (+)
abi3bpb abi3bpb,LOC107566041,LOC107717674,LOC107704546,LOC107720343,LOC108436625 coding upstream 500078 13278371 ~ 13302756 (+)
arhgap19 arhgap19,LOC107679052,LOC107714154,LOC107706113,LOC107657488,LOC107588461,LOC107551371,LOC107551358 coding downstream 275669 14078950 ~ 14088700 (+)
slit1b slit1b,LOC107588453,LOC107714155,LOC107551370,LOC107657487,LOC107679047 coding downstream 287269 14090550 ~ 14130334 (+)
si:ch211-126j24.1 si:ch211-126j24.1,LOC107550685,LOC107697062,LOC107588448 coding downstream 398847 14202128 ~ 14246917 (+)
klc4 klc4,LOC107753482,LOC107697060,LOC107550686,LOC102783141,LOC102306811,LOC102210354 coding downstream 445215 14248496 ~ 14270825 (+)
soul4 soul4,LOC107702255,LOC107588447,LOC107753484,LOC107697063 coding downstream 470604 14273885 ~ 14280638 (+)
G152585 NA non-coding upstream 113231 13583785 ~ 13689603 (+)
LOC122328069 LOC107602652,LOC107717663,LOC107704540 non-coding upstream 149324 13653065 ~ 13653510 (+)
LOC122327079 NA non-coding upstream 149797 13651501 ~ 13653037 (+)
G152578 NA non-coding upstream 262039 13540257 ~ 13540795 (+)
G152571 LOC107717667,LOC107704552,LOC107602676 non-coding upstream 326326 13472195 ~ 13476508 (+)
G152643 NA non-coding downstream 28022 13831303 ~ 13833186 (+)
G152653 NA non-coding downstream 44851 13848132 ~ 13848611 (+)
LOC122327202 NA non-coding downstream 45453 13848734 ~ 13852436 (+)
LOC122328070 NA non-coding downstream 159843 13963124 ~ 13965812 (+)
LOC122328230 NA non-coding downstream 163826 13967107 ~ 13967225 (+)
G152584 LOC107691164,LOC107602672,LOC107720370,LOC107559552,LOC107667897,LOC107736246,LOC107717652 other upstream 120887 13575738 ~ 13681947 (+)
baiap2l2b baiap2l2b,LOC107717666,LOC107704557,LOC107602661,LOC107559544,LOC107720338 other upstream 293582 13404842 ~ 13509252 (+)
G152565 NA other upstream 384427 13417464 ~ 13418407 (+)
G152558 col8a1b,LOC107717673,LOC107720377,LOC107704548,LOC107667898,LOC107602679,LOC107571642 other upstream 419057 13383153 ~ 13383777 (+)
LOC122327212 NA other upstream 622559 13176427 ~ 13180275 (+)
LOC122327219 cunh10orf76,zgc:63733,LOC107551381,LOC107714152,LOC107588454,LOC107657489 other downstream 237440 14040721 ~ 14058580 (+)
kcnip2 kcnip2,LOC107714153,LOC107679051,LOC107551372 other downstream 268195 14071476 ~ 14078380 (+)
ptk7a ptk7a,LOC107702250,LOC107732247,LOC107588446,LOC107550662,LOC107697061 other downstream 480611 14283892 ~ 14313136 (+)
G152767 cp,LOC107572087,LOC107732248 other downstream 654868 14458149 ~ 14462660 (+)
G152808 LOC107588428,LOC107689379,LOC107573874,LOC107753503 other downstream 883223 14686504 ~ 14691808 (+)

Expression


Co-expression Network