G14217


Basic Information

Item Value
gene id G14217
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 2004161 ~ 2005063 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU15915
TTTGTGCGCAAAAACAAAATAAAAATAACATCTTTATTCATCAAATTCGAATGACCCCTGTCATTCTCCTACGTTGTTTACATTCAGCGCTTCCAGGTTCTTCGTCCGAACGCCAGCTCAGTATTGGTGTGCCAGCATCACTCGCATGCGTAGTGCTGCTCACATGTACAGCACTGGCCAATAATAAGGGTGCATTCACACTTGTAGTTCGGTTCGTTTGGTTAATTTGGTCCGGACCAAAAAAGGAAAAAAAACATTTAGTCCTGGCTTGATTAGCGTTCAGATTGGCAATTTTATCACCGAACCAAAAGATACCGAACCTAAAGTCATAGGGATACATTCACAACCTGATTGGTCGGATTTTATGACGTATTGCCTATTTTGAGACGGAACTTACCAAACATCCAAAACAATGCTGTGCGCTGAGATAAATGCGCTCGTTGTGTGTGCGTAGCCTGCATATGATGGTATTTTGGCCAGCTGGGAACTCGTGAAGAGCTTATAAAATGTGTAAAGGAGTCAAAACAGCAGCGGGAATCCCTCCGTCACACACACAAACGATCTGCTGCGTGGAGACGCACGTCTGATGCCTGTGATGGGCAAACTCACGACTATGACAAGAAAAACCGATATGCGTGAGGATTCTGTCCTTTTTAGGGTCTCATCTTCCTGTTTATGGTTCGTTTACATGTCTTTGGTCCGTGTTGCCTTCATATATCATTCGAACCACACCAGAGTTCGTTTGGAAGCGGACCGAGACCCATCTTTTCAGCGGTCTCGGTCCACTTGTTTGGTGCGCACCATGATTCGGATGGCAGCGTTCACATATGTTCAAATGAACCGCACTAACAGTATACTGGTCGCTTCATAACATTAAAGTTGAACCACTGTAGTCACATTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15915 True 903 lncRNA 0.45 1 2004161 2005063

Neighbor

gene id symbol gene type direction distance location
CI01000001_01999489_02002753 IGFBP6B, IGFBP6 coding downstream 1233 1998128 ~ 2002928 (-)
CI01000001_01976950_01992032 GPR182, PIP4K2CA, PIP4K2C coding downstream 10600 1976716 ~ 1993561 (-)
CI01000001_01932927_01933914 TSPAN31 coding downstream 70247 1932621 ~ 1933914 (-)
CI01000001_01902970_01917410 MARCH9 coding downstream 86707 1902429 ~ 1917454 (-)
CI01000001_01873684_01874535 NA coding downstream 129626 1873640 ~ 1874535 (-)
CI01000001_02057429_02071506 LIMA1A coding upstream 51751 2056814 ~ 2071506 (-)
CI01000001_02126257_02127537 NA coding upstream 120002 2125065 ~ 2127567 (-)
CI01000001_02141590_02142836 COPZ1, COPZ1.L, COPZ1-B coding upstream 136497 2141560 ~ 2142986 (-)
CI01000001_02159372_02162554 HNRNPA1, ROA1 coding upstream 154096 2159159 ~ 2162554 (-)
CI01000001_02173311_02179118 NA coding upstream 167707 2172770 ~ 2180987 (-)
G14267 NA non-coding downstream 28294 1975195 ~ 1975867 (-)
G14261 NA non-coding downstream 81921 1921899 ~ 1922240 (-)
G14259 NA non-coding downstream 83315 1920595 ~ 1920846 (-)
G14257 NA non-coding downstream 108071 1893706 ~ 1896090 (-)
G14112 NA non-coding downstream 132595 1867635 ~ 1871566 (-)
G14213 NA non-coding upstream 232 2005295 ~ 2007049 (-)
G14216 NA non-coding upstream 97093 2102156 ~ 2102501 (-)
G14198 NA non-coding upstream 97526 2102589 ~ 2103469 (-)
G14293 NA non-coding upstream 113292 2118355 ~ 2118566 (-)
G14297 NA non-coding upstream 138078 2143141 ~ 2143365 (-)
G14219 NA other downstream 9263 1994210 ~ 1994898 (-)
G14104 NA other downstream 236703 1763669 ~ 1771468 (-)
CI01000001_00362143_00378213 NA other downstream 1607028 361614 ~ 378213 (-)
CI01000001_00238241_00249437 NA other downstream 1746644 238241 ~ 249437 (-)
CI01000001_00124107_00131285 ELOVL4B other downstream 1869236 122814 ~ 131380 (-)
G14228 NA other upstream 50911 2055974 ~ 2056478 (-)
CI01000001_02258523_02262621 NA other upstream 254326 2258442 ~ 2263103 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 2387251 4392314 ~ 4399804 (-)
CI01000001_04468566_04523431 DNMT3BB.1 other upstream 2471221 4468209 ~ 4523431 (-)
CI01000001_04726550_04727511 PDPFB, PPDPFB, PPDPF other upstream 2564019 4725927 ~ 4728210 (-)

Expression


Co-expression Network