sirt7 (sirt7,LOC107667823,LOC107705833,LOC107569249,LOC107706268)


Basic Information

Item Value
gene id sirt7
gene name sirt7,LOC107667823,LOC107705833,LOC107569249,LOC107706268
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 14782382 ~ 14788693 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU226234
TGGACGCGAACACAAATAGAGGCTCCTCTGCCAGGgcagaaagaaaacagcaaGAAAAGGCGAAAATCATACAGCGAGAGAAACAACGACAGACTGTGAAAACGATCTCCAGGCTCCTCCAGAAGGCTGAGGCAGAACGGACGCAAGAGGACAGGGCTCTGCTGCTAGAGCATCAGAACACTGTGCAGGAGCTGAGCCGGAGACAGAGCCGCAGAGCCCTGCTCAAGAGGAAACAAGAGGAGacagccagacttaatttctgtattttgcaTCTGAAAATGTGTCTTGATTTGATGATTCTTGGAAACTTGAcctggaaaacaaaaacacagaggaagacaatcattatatatattattatatatttatatattacctATAAGACCTCTGTTCATCTTTGGGactcaaattaagatatttttccaAGAGCTCTCTGACCATGCATAGATAGCAAGGACCATTTTGGATAGTATCACATACAAACAATGTGTGCAACAGCATATCAgcatacatatgtgtatgttATGTATGTGTTGCTCTCCAAAGTGGTACTATAGAGTGATGCagaggagacaaattgttgaataaagttattattgtTGATTTACTTGATCACAAAAAGTAGCTTCATAGCTTTAGAAAATTacggttaaaccactgatgtaaCAGATTATTTTAGCAATGTCCTTGCTCCGTTcctggacctgggaacatttcaatctcag
>XM_043223113.1
taataataaaataataataataatatgttttttgaaaagTAAAATTTTCTCTACTTTCCTACTACTGAGGCTAAGAACCATCTAGCTAAACCATCTCGGTTtaggctaaaataaaataaattatatgtttgtttaatcGATGGCTCCATATACTTCTATGGATGACtccacttttcttttttgctgcAAATCTCGCGAGATCGGCGTCACTGGCGAGAACTAGCATGGACGCGAACACAAATAGAGGCTCCTCTGCCAGGgcagaaagaaaacagcaaGAAAAGGCGAAAATCATACAGCGAGAGAAACAACGACAGACTGTGAAAACGATCTCCAGGCTCCTCCAGAAGGCTGAGGCAGAACGGACGCAAGAGGACAGGGCTCTGCTGCTAGAGCATCAGAACACTGTGCAGGAGCTGAGCCGGAGACAGAGCCGCAGAGCCCTGCTCAAGAGGAAACAAGAGGAGGTGTTTGATGATGCTGAGGACCTCAGGGCTAAAGTGAAGCAGCTGGCAGAAGCGCTACAGCAGGCCAAGCATGTGGTCTTCTACACCGGAGCAGGAATTAGCACATTTATGGGTTCTCGCCAGGCTGCCTCCATCCCAGACTATCGGGGGCCAAATGGCGTGTGGACTCAGCTGCAGAAGGGTCAATCTGTGAGTGCGTCAGATCTGAGTCGAGCAGAGcccactctcacacacatgtgCATCTGGATGTTACACAAAGTGAAGATGGTTCAGCATGTGGTCTCGCAGAACTGTGATGGTCTTCACCTGCGCAGTGGTTTGCCCAGACACGCTCTCTCTGAACTCCACGGAAACATGTTCATTGAGGTGTGTGATTGCTGCTCTCCGGTGCAGGAGTTTATCCGGCTCTTCGATGTGACTGAGCGCACGGCCCTACACAGACATGGCACGGGCCGTCTGTGTACTCACTGCAGAGCAGAGCTCAGAGACACTATTGTACACTTCGGAGAGCGGGGCACCCTGGACCAGCCACTCAACTGGAAGGGGGCCTCCGAGGCAGCACAGCAGACCGACCTCATCCTCTGCTTGGGCTCCAGCTTGAAGGTGTTAAAGAAGTACTCATGCTTGTGGTGCATGAACAGACCAGCCAACAAAAGACCAAAGCTGTACATTGTAAATCTACAGTGGACACCAAAAGATAACCTGGCTACTCTGAAAATTCACGGCAAGTGTGATGCTGTGATGAGTCTTCTGATGGAGGAGCTGGGTTTGCAAATTCCTGTTTACAACAGATCACAAGACCCCATCTTCAGCTTGGCTAAACCACTCAGTCCACAAGAGCAGAAAAGCCACACTCGTATGGAAATAGCGCCACCTGCTGCTCTACAGGATGCTTCACCAGACACACAGGCTCAGGGTGAAGCTACAGCGGTTCAGGGCGGCTGGTTTGGAAGAGGATATACCAAAGCACGGAGGAAAAAGAAGACCTAGTCCTAACCCAACAGAGCAGCTTCAGGAACTGTGTTCTCATTCACTGCTTGAATACATATTTCTAAGAGTACATTACTGATAAATGTGATGCTATAACCTCAGAGGTTACAGATAACTGCTTTTCTGTAAAGATACAGCGTTAAAATAACTTGTAGCAGAGTAATGCAGGTTCACACGATGATGTGGTTTGGCTAAGTGCACTTTACTTCCAATCTCAGGTTTACAGAAGAGAAGCAACATATGATTCTAATGATGCTGAAGtttttgctattgttttttCACCTAGTATTTAAAATGGTCATTTACTTGCTCATACGTTGTTCCAAAACCTTTGCAGGAAAAACATGCAGAATGTCCAGAAAGCTGTTTTTGGATACAGGTGGAAATAAGCATGCCTTTAAGCTCTATGAAGGTAGCATGAAAGTACAATACTTGTCATGCTTTGCAAAATGAAATTGTTGAAGcatgaacattctgctaaacttTTTGTATGTCGTGTATAGAACAACATGTGGATGAGTAAAAGACTTGTTTGCATTAAACTTTAGATTGTAGTTGTTTACAAGAAGTCAGTGTTACTGGATTgagtaaaaatgaatgctttatttcagtccactattaaaatgaatgaattccaTTTAACTTAAGGAATTGGATAAACAGTTCTCAACCAAATAATAGAATGCGtgtaattcaattaaatgtttgttgacCCTTAATATGGTGTTATAGCTGATTAGAACCTGAATTTATGTCTTAACCTTCCTTGTTAAAGTATAGATTTTCTGTACACGAGTAAGAAAACCCTCACAATGTGGactttataataattgtattaactTGAACTGAGATTGACGTTTGGTTGGTTTTAGATGCCATTTGTTTTTAACTGCTGTAAGTGCCATTACCTGTACGTCATTGGTTTTGTACTaatttctgtttcagttttcACAGGCATTCTGTGTACTACTGTAAAGAAAACTTGAGGAATTACATGATTATACttgtattgaaaataaatgaaaatggacAATTTCCACATATGCCACAACA
>XM_043223114.1
taataataaaataataataataatatgttttttgaaaagTAAAATTTTCTCTACTTTCCTACTACTGAGGCTAAGAACCATCTAGCTAAACCATCTCGGTTtaggctaaaataaaataaattatatgtttgtttaatcGATGGCTCCATATACTTCTATGGATGACtccacttttcttttttgctgcAAATCTCGCGAGATCGGCGTCACTGGCGAGAACTAGCATGGACGCGAACACAAATAGAGGCTCCTCTGCCAGGgcagaaagaaaacagcaaGAAAAGGCGAAAATCATACAGCGAGAGAAACAACGACAGACTGTGAAAACGATCTCCAGGCTCCTCCAGAAGGCTGAGGCAGAACGGACGCAAGAGGACAGGGCTCTGCTGCTAGAGCATCAGAACACTGTGCAGGAGCTGAGCCGGAGACAGAGCCGCAGAGCCCTGCTCAAGAGGAAACAAGAGGAGGTGTTTGATGATGCTGAGGACCTCAGGGCTAAAGTGAAGCAGCTGGCAGAAGCGCTACAGCAGGCCAAGCATGTGGTCTTCTACACCGGAGCAGGAATTAGCACAGCTGCCTCCATCCCAGACTATCGGGGGCCAAATGGCGTGTGGACTCAGCTGCAGAAGGGTCAATCTGTGAGTGCGTCAGATCTGAGTCGAGCAGAGcccactctcacacacatgtgCATCTGGATGTTACACAAAGTGAAGATGGTTCAGCATGTGGTCTCGCAGAACTGTGATGGTCTTCACCTGCGCAGTGGTTTGCCCAGACACGCTCTCTCTGAACTCCACGGAAACATGTTCATTGAGGTGTGTGATTGCTGCTCTCCGGTGCAGGAGTTTATCCGGCTCTTCGATGTGACTGAGCGCACGGCCCTACACAGACATGGCACGGGCCGTCTGTGTACTCACTGCAGAGCAGAGCTCAGAGACACTATTGTACACTTCGGAGAGCGGGGCACCCTGGACCAGCCACTCAACTGGAAGGGGGCCTCCGAGGCAGCACAGCAGACCGACCTCATCCTCTGCTTGGGCTCCAGCTTGAAGGTGTTAAAGAAGTACTCATGCTTGTGGTGCATGAACAGACCAGCCAACAAAAGACCAAAGCTGTACATTGTAAATCTACAGTGGACACCAAAAGATAACCTGGCTACTCTGAAAATTCACGGCAAGTGTGATGCTGTGATGAGTCTTCTGATGGAGGAGCTGGGTTTGCAAATTCCTGTTTACAACAGATCACAAGACCCCATCTTCAGCTTGGCTAAACCACTCAGTCCACAAGAGCAGAAAAGCCACACTCGTATGGAAATAGCGCCACCTGCTGCTCTACAGGATGCTTCACCAGACACACAGGCTCAGGGTGAAGCTACAGCGGTTCAGGGCGGCTGGTTTGGAAGAGGATATACCAAAGCACGGAGGAAAAAGAAGACCTAGTCCTAACCCAACAGAGCAGCTTCAGGAACTGTGTTCTCATTCACTGCTTGAATACATATTTCTAAGAGTACATTACTGATAAATGTGATGCTATAACCTCAGAGGTTACAGATAACTGCTTTTCTGTAAAGATACAGCGTTAAAATAACTTGTAGCAGAGTAATGCAGGTTCACACGATGATGTGGTTTGGCTAAGTGCACTTTACTTCCAATCTCAGGTTTACAGAAGAGAAGCAACATATGATTCTAATGATGCTGAAGtttttgctattgttttttCACCTAGTATTTAAAATGGTCATTTACTTGCTCATACGTTGTTCCAAAACCTTTGCAGGAAAAACATGCAGAATGTCCAGAAAGCTGTTTTTGGATACAGGTGGAAATAAGCATGCCTTTAAGCTCTATGAAGGTAGCATGAAAGTACAATACTTGTCATGCTTTGCAAAATGAAATTGTTGAAGcatgaacattctgctaaacttTTTGTATGTCGTGTATAGAACAACATGTGGATGAGTAAAAGACTTGTTTGCATTAAACTTTAGATTGTAGTTGTTTACAAGAAGTCAGTGTTACTGGATTgagtaaaaatgaatgctttatttcagtccactattaaaatgaatgaattccaTTTAACTTAAGGAATTGGATAAACAGTTCTCAACCAAATAATAGAATGCGtgtaattcaattaaatgtttgttgacCCTTAATATGGTGTTATAGCTGATTAGAACCTGAATTTATGTCTTAACCTTCCTTGTTAAAGTATAGATTTTCTGTACACGAGTAAGAAAACCCTCACAATGTGGactttataataattgtattaactTGAACTGAGATTGACGTTTGGTTGGTTTTAGATGCCATTTGTTTTTAACTGCTGTAAGTGCCATTACCTGTACGTCATTGGTTTTGTACTaatttctgtttcagttttcACAGGCATTCTGTGTACTACTGTAAAGAAAACTTGAGGAATTACATGATTATACttgtattgaaaataaatgaaaatggacAATTTCCACATATGCCACAACA

Function

symbol description
sirt7 Predicted to enable NAD-dependent histone deacetylase activity (H3-K18 specific) and transcription corepressor activity. Acts upstream of or within hematopoietic progenitor cell differentiation. Predicted to be active in nucleus. Is expressed in retina. Orthologous to human SIRT7 (sirtuin 7).

NR:

description
PREDICTED: NAD-dependent protein deacetylase sirtuin-7

GO: NA

KEGG:

id description
K11417 SIRT7, SIR2L7; NAD+-dependent protein deacetylase sirtuin 7

RNA

RNA id representative length rna type GC content exon number start site end site
TU226234 False 725 lncRNA 0.41 3 14782607 14783802
XM_043223113.1 True 2510 mRNA 0.43 10 14782382 14788693
XM_043223114.1 False 2492 mRNA 0.43 10 14782382 14788693

Neighbor

gene id symbol gene type direction distance location
senp5 senp5,LOC107662925,LOC107706280,LOC107588423 coding upstream 2835 14771986 ~ 14779547 (+)
anos1b anos1b,LOC107588425,LOC107662924,LOC107707894,LOC107569245 coding upstream 11143 14716008 ~ 14771239 (+)
pex6 pex6,LOC107690068,LOC107753488,LOC107662915,LOC104944420 coding upstream 206439 14562077 ~ 14575943 (+)
LOC122327136 tm4sf4,LOC107572086,LOC107691056,LOC107753508,LOC107662946 coding upstream 274218 14506280 ~ 14508164 (+)
tm4sf4 tm4sf4,LOC107572086,LOC107691056,LOC107753508,LOC107662946 coding upstream 290159 14489783 ~ 14492223 (+)
arhgef3 arhgef3,LOC107706277,LOC107588420,LOC107569252,LOC107705836 coding downstream 4103 14792796 ~ 14848187 (+)
tasora LOC107588417,LOC107662921,LOC107706275 coding downstream 68915 14857608 ~ 14884579 (+)
ip6k1 ip6k1,LOC107662926,LOC107705840,LOC107667830,LOC107570931 coding downstream 107185 14895878 ~ 14923894 (+)
gmppb gmppb coding downstream 139807 14928500 ~ 14936935 (+)
lmcd1 lmcd1,LOC107662933 coding downstream 148599 14937292 ~ 14965587 (+)
G152844 NA non-coding upstream 67503 14714213 ~ 14714879 (+)
G152809 LOC107662927,LOC107588426,LOC107707893 non-coding upstream 70843 14707703 ~ 14711539 (+)
G152787 wwtr1,LOC107753487,LOC107588432,LOC107662944,LOC107572084 non-coding upstream 197763 14548813 ~ 14584619 (+)
G152807 NA non-coding upstream 199013 14579474 ~ 14583369 (+)
G152765 cp,LOC107732248,LOC107572087 non-coding upstream 313729 14465802 ~ 14468653 (+)
LOC122327819 NA non-coding downstream 19150 14807843 ~ 14809151 (+)
G153039 NA non-coding downstream 180722 14969415 ~ 15070483 (+)
G153050 NA non-coding downstream 290153 15078846 ~ 15106926 (+)
G153053 NA non-coding downstream 294227 15082920 ~ 15083654 (+)
G153056 NA non-coding downstream 298794 15087487 ~ 15089917 (+)
G152808 LOC107588428,LOC107689379,LOC107573874,LOC107753503 other upstream 90574 14686504 ~ 14691808 (+)
G152767 cp,LOC107572087,LOC107732248 other upstream 319722 14458149 ~ 14462660 (+)
ptk7a ptk7a,LOC107702250,LOC107732247,LOC107588446,LOC107550662,LOC107697061 other upstream 469246 14283892 ~ 14313136 (+)
kcnip2 kcnip2,LOC107714153,LOC107679051,LOC107551372 other upstream 704002 14071476 ~ 14078380 (+)
LOC122327219 cunh10orf76,zgc:63733,LOC107551381,LOC107714152,LOC107588454,LOC107657489 other upstream 723802 14040721 ~ 14058580 (+)
kif14 kif14,LOC107679839,LOC107699428,LOC107719633,LOC107586446,LOC107717989 other downstream 407223 15195916 ~ 15219764 (+)
dennd1b dennd1b,LOC107712206,LOC107586420,LOC107664901,LOC107741568,LOC107556170 other downstream 834400 15623093 ~ 15712086 (+)
G153322 LOC107565915,LOC107680281,LOC107709523,LOC107565908,LOC107680280,LOC107706842,LOC107576284 other downstream 1215871 16004564 ~ 16035615 (+)
LOC122327825 LOC107565915,LOC107680281,LOC107709523,LOC107680280,LOC107565908,LOC107706842 other downstream 1288888 16077581 ~ 16078895 (+)
LOC122327131 NA other downstream 1374690 16163383 ~ 16171629 (+)

Expression


Co-expression Network