LOC122327819


Basic Information

Item Value
gene id LOC122327819
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 14807843 ~ 14809151 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU226243
TAACTGAGCAACCCAGCGCTGCTCCACTGCTCCAAGATTGGCTGTTTCCAGGTATCGGAGGGGATTGTGGTCAGTGACTACTTGAAACTTTGCAAACATCAGAACCCTTCAGACCACGGCTCGCATAGGCGACGACACGCTCTATACCCCCCTGCTTTTGGCTGAGGATCGCTCCAAGTCCATTGCGACTCCCATCCGTCGTCAGTATGAACGGACACTGGAAATCAG
>XR_006247723.1
GTTGCTCACAAATAGATGACCAGCTGTAACCATCGACACCCTTCTTTATGATGGCTTGTTTGGCAACATGGGTTGGCATTTCTTCGCTCTCCTCTCCTTTACCTGGCCACAAGCATGCTCGTACCTCATCCGTGGTTAACAGAATGAAGTCTTTTCCTGTATCATCTTTCTCAGGTTCTACACTCCAGGGAATCCTAGAAAGAACGTCGGCATTGATGTTTTGTCTTCCAGGTTTGTAACAAACCTCAAAGTTGAATTCTGATAACTGAGCAACCCAGCGCTGCTCCACTGCTCCAAGATTGGCTGTTTCCAGGTATCGGAGGGGATTGTGGTCAGTGACTACTTGAAACTTTGCAAACATCAGAACCCTTCAGACCACGGCTCGCATAGGCGACGACACGCTCTATACCCCCCTGCTTTTGGCTGAGGATCGCTCCAAGTCCATTGCGACTCCCATCCGTCGTCAGTATGAACGGACACTGGAAATCAGGAGCATGCAAGGGCTTTGCCAGCTGTGCAAACCTCGGGACAAAACGGCGGTAGTAACTCATAAATCCCAACAGCTGTCTGACTTCTCTAACATTTGTTGGCTTAGGCCATGCATCCAAGCACTGTACTTTGTCCATATCCACTTGAATTCCCTTCACTGAAATTATGTGTCCTAAGAACCTGACTTCTGGCTTAAAGAGGAAACATTTACTGGGCTTCAGTTTCAGGCCGTGTTGACGTAACCTTGAGAACACAAGCTCCAGTCTTTCACAATGAGACTTGAAATCTTCTGAGAACACAATGATATCATCAAGGTAGATCAAAAGAACATCGAAGGCCAGATCACCTAGTGCTGCACCCATCAAACGTTGAAAGGTGGCTGGAGCGTTACATAAACCAAACGGCATCCGTGTCCACTCAAACAATCCAAAAGGTGTCGTGACAGCAGTCTTCTCCCGGTCTGACTCACTTACTGCCACCTGGAAATAACCGGCCGTGAGATCTAATGTGGAAAACAACTTTGCATTGCCTAAAGCATCCAAAGATTCTTCTACACGAGGAAGGGGGTAAGCATCTTTGAATGTGACTTGATTAAGTCTCCTGTAGTCACAACAGAA

Function

GO: NA

KEGG:

id description
ko03030 DNA replication

RNA

RNA id representative length rna type GC content exon number start site end site
TU226243 False 228 lncRNA 0.54 2 14808105 14808418
XR_006247723.1 True 1106 lncRNA 0.47 3 14807843 14809151

Neighbor

gene id symbol gene type direction distance location
senp5 senp5,LOC107662925,LOC107706280,LOC107588423 coding upstream 28296 14771986 ~ 14779547 (+)
anos1b anos1b,LOC107588425,LOC107662924,LOC107707894,LOC107569245 coding upstream 36604 14716008 ~ 14771239 (+)
pex6 pex6,LOC107690068,LOC107753488,LOC107662915,LOC104944420 coding upstream 231900 14562077 ~ 14575943 (+)
LOC122327136 tm4sf4,LOC107572086,LOC107691056,LOC107753508,LOC107662946 coding upstream 299679 14506280 ~ 14508164 (+)
tm4sf4 tm4sf4,LOC107572086,LOC107691056,LOC107753508,LOC107662946 coding upstream 315620 14489783 ~ 14492223 (+)
tasora LOC107588417,LOC107662921,LOC107706275 coding downstream 48457 14857608 ~ 14884579 (+)
ip6k1 ip6k1,LOC107662926,LOC107705840,LOC107667830,LOC107570931 coding downstream 86727 14895878 ~ 14923894 (+)
gmppb gmppb coding downstream 119349 14928500 ~ 14936935 (+)
lmcd1 lmcd1,LOC107662933 coding downstream 128141 14937292 ~ 14965587 (+)
LOC122327882 LOC107679839,LOC107717989,LOC107719633,LOC107699428,LOC107586446 coding downstream 191882 15001033 ~ 15002970 (+)
G152844 NA non-coding upstream 92964 14714213 ~ 14714879 (+)
G152809 LOC107662927,LOC107588426,LOC107707893 non-coding upstream 96304 14707703 ~ 14711539 (+)
G152787 wwtr1,LOC107753487,LOC107588432,LOC107662944,LOC107572084 non-coding upstream 223224 14548813 ~ 14584619 (+)
G152807 NA non-coding upstream 224474 14579474 ~ 14583369 (+)
G152765 cp,LOC107732248,LOC107572087 non-coding upstream 339190 14465802 ~ 14468653 (+)
G153039 NA non-coding downstream 160264 14969415 ~ 15070483 (+)
G153050 NA non-coding downstream 269695 15078846 ~ 15106926 (+)
G153053 NA non-coding downstream 273769 15082920 ~ 15083654 (+)
G153056 NA non-coding downstream 278336 15087487 ~ 15089917 (+)
G153065 NA non-coding downstream 301064 15110215 ~ 15111978 (+)
sirt7 sirt7,LOC107667823,LOC107705833,LOC107569249,LOC107706268 other upstream 19150 14782382 ~ 14788693 (+)
G152808 LOC107588428,LOC107689379,LOC107573874,LOC107753503 other upstream 116035 14686504 ~ 14691808 (+)
G152767 cp,LOC107572087,LOC107732248 other upstream 345183 14458149 ~ 14462660 (+)
ptk7a ptk7a,LOC107702250,LOC107732247,LOC107588446,LOC107550662,LOC107697061 other upstream 494707 14283892 ~ 14313136 (+)
kcnip2 kcnip2,LOC107714153,LOC107679051,LOC107551372 other upstream 729463 14071476 ~ 14078380 (+)
kif14 kif14,LOC107679839,LOC107699428,LOC107719633,LOC107586446,LOC107717989 other downstream 386765 15195916 ~ 15219764 (+)
dennd1b dennd1b,LOC107712206,LOC107586420,LOC107664901,LOC107741568,LOC107556170 other downstream 813942 15623093 ~ 15712086 (+)
G153322 LOC107565915,LOC107680281,LOC107709523,LOC107565908,LOC107680280,LOC107706842,LOC107576284 other downstream 1195413 16004564 ~ 16035615 (+)
LOC122327825 LOC107565915,LOC107680281,LOC107709523,LOC107680280,LOC107565908,LOC107706842 other downstream 1268430 16077581 ~ 16078895 (+)
LOC122327131 NA other downstream 1354232 16163383 ~ 16171629 (+)

Expression


Co-expression Network