G153053


Basic Information

Item Value
gene id G153053
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 15082920 ~ 15083654 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU226556
GTTCCCTTCAGTTTCTGAGGCATGACGATGCTCTGCACGGAGAACACGAAGCGGGCCTCGTTCGAAACCCCGGGGGCAGCTGGAAGGGGACGGTGAGGCCGTCGTGAGGGCCGGCTCCCTCCGGCCGCTGGAGTTTAGAGTTGAGGGAATCCAGCACATTGAACTCCATCGACTTCAGGAAGCTGTCGCTCTTGTTCTCGAAGATGACCGACACCACAACTTTGCTCTCATCCTGATGGTTGCCCTGGATGTCGTACACCTAGAGGACAGAAAAGACGTTTTACGTGGAGCGGGAAAGCGTAAGGACGCCAAAATGCGTAGAACACACCAACACGGGGATCTCGGCGGTTGAAGAAGGCCAGAGGAAACGAAGAGCCCAAAACTAGCCCAGGTCAAAGGGAGGTAAGGCCTTttatatcatcatcatccaaaATGAGGAGAAGCTCACATCAGCTTTAACTACACCAAACGGGTGCATTTAATAACTCATGTTTAGAGTCAGAGCTTGAAGATGATTGGACAGTCTTGTAGCACTCAAAAGACGTTAGTCACAGCAGACAACGCTTTTCATTTGACTTTTACGTTTATGGTGTTACAAGTCGAGTATCTTTACGTGTATATTTCTTACTCAAGTAAAATTTAGATAAAA

Function

GO:

id name namespace
GO:0042073 intraciliary transport biological_process
GO:0007017 microtubule-based process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU226556 True 649 lncRNA 0.49 2 15082920 15083654

Neighbor

gene id symbol gene type direction distance location
LOC122327882 LOC107679839,LOC107717989,LOC107719633,LOC107699428,LOC107586446 coding upstream 79950 15001033 ~ 15002970 (+)
lmcd1 lmcd1,LOC107662933 coding upstream 117333 14937292 ~ 14965587 (+)
gmppb gmppb coding upstream 145985 14928500 ~ 14936935 (+)
ip6k1 ip6k1,LOC107662926,LOC107705840,LOC107667830,LOC107570931 coding upstream 159026 14895878 ~ 14923894 (+)
tasora LOC107588417,LOC107662921,LOC107706275 coding upstream 198341 14857608 ~ 14884579 (+)
ubxn6 LOC107717977,LOC107679838,LOC107593331,LOC107719551,LOC107699423,LOC107586413 coding downstream 30532 15114186 ~ 15119829 (+)
scamp4 scamp4,LOC107717975,LOC107699425,LOC107719549,LOC107679840,LOC107586414 coding downstream 46746 15130400 ~ 15135596 (+)
ddx59 ddx59,LOC107717990,LOC107578347 coding downstream 106173 15189827 ~ 15194872 (+)
LOC122327180 LOC107593352,LOC107717987,LOC107679830,LOC107593351,LOC107717988,LOC107679833 coding downstream 136793 15220447 ~ 15288892 (+)
aspm LOC107712224,LOC107699437,LOC107586448,LOC107556171,LOC107577714 coding downstream 652247 15735901 ~ 15752487 (+)
G153039 NA non-coding upstream 12437 14969415 ~ 15070483 (+)
LOC122327819 NA non-coding upstream 273769 14807843 ~ 14809151 (+)
G152844 NA non-coding upstream 368041 14714213 ~ 14714879 (+)
G152809 LOC107662927,LOC107588426,LOC107707893 non-coding upstream 371381 14707703 ~ 14711539 (+)
G152807 NA non-coding upstream 499551 14579474 ~ 14583369 (+)
G153056 NA non-coding downstream 3833 15087487 ~ 15089917 (+)
G153065 NA non-coding downstream 26561 15110215 ~ 15111978 (+)
G153083 NA non-coding downstream 52681 15136335 ~ 15137623 (+)
LOC122327701 NA non-coding downstream 207041 15290695 ~ 15311067 (+)
G153178 NA non-coding downstream 367795 15451449 ~ 15512639 (+)
sirt7 sirt7,LOC107667823,LOC107705833,LOC107569249,LOC107706268 other upstream 294227 14782382 ~ 14788693 (+)
G152808 LOC107588428,LOC107689379,LOC107573874,LOC107753503 other upstream 391112 14686504 ~ 14691808 (+)
G152767 cp,LOC107572087,LOC107732248 other upstream 620260 14458149 ~ 14462660 (+)
ptk7a ptk7a,LOC107702250,LOC107732247,LOC107588446,LOC107550662,LOC107697061 other upstream 769784 14283892 ~ 14313136 (+)
kcnip2 kcnip2,LOC107714153,LOC107679051,LOC107551372 other upstream 1004540 14071476 ~ 14078380 (+)
kif14 kif14,LOC107679839,LOC107699428,LOC107719633,LOC107586446,LOC107717989 other downstream 112262 15195916 ~ 15219764 (+)
dennd1b dennd1b,LOC107712206,LOC107586420,LOC107664901,LOC107741568,LOC107556170 other downstream 539439 15623093 ~ 15712086 (+)
G153322 LOC107565915,LOC107680281,LOC107709523,LOC107565908,LOC107680280,LOC107706842,LOC107576284 other downstream 920910 16004564 ~ 16035615 (+)
LOC122327825 LOC107565915,LOC107680281,LOC107709523,LOC107680280,LOC107565908,LOC107706842 other downstream 993927 16077581 ~ 16078895 (+)
LOC122327131 NA other downstream 1079729 16163383 ~ 16171629 (+)

Expression


Co-expression Network