G153083


Basic Information

Item Value
gene id G153083
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 15136335 ~ 15137623 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU226598
aatatgtattcgTGAGAACAGAGGAATAGGAATGTTGCCGTTGGgtgctgagttcccgacgcggagaggaggacatcttagaaagatcttcacagaggagcagactgataagatggctgccTTTTTttagtgagcttcttgagaaGGAGGTCTCAAGTGTCGACTTGCACCTGTAGCCTATAAAGGAGGGCTGCacttaaaattcaaaattcaaattcaaattttatttgtcacatacacatacatacatggtacgacatgcagtgaaatgttctttacaaccgtccagcatcaaaatagaaacaaaatttaaatgtatatataaatataaaatataagaaatatatataaaaagaagtgtgcaaagtagaatataaaaaaataaaataaaatagaatataaatataaagtgtaaagtgtaagtgtaaagtggctgtgcaatgtccagtgcaaagtggctagtgcaattgtccaaatgtaagtggcgagtatctggggaaagaggggtgaacatgggaattccggtatttaggtgctgggtgtttcctggttcagactccgaatggcctgcgggaagaagctcctcctcattctctctgtgtttgccttcagggaacgaaagcgctttcctgaacgcagcagagaaaagagtccattgttgggatggctgaggtcttccacgatcttcctggccctggtacagcaccgcttgttgtagatgtgctgcagcacagggagctcagtgcggatggtgcgctcagctgaccgcaccaccttctggagagctcgcctgtcctgcatggtgctgtttccaaaccaggaggtgatgtttcccgtcaggacactctcgatggtgcaggtgtaaaagttcctgagcacctgagatgggagtctgaagtcccttaagcgcctcagatggtatagacgctgccgggccttcttcaccagggtgttgatgtgacaggaccaagacaggtcctgcgtgatgtgaacacccaggtaccggaaactgtccactctctccactggggtcccgtcaatcttgatgggatggtaagagcgcacctgcttcgtgctgaagtccactattaactcctttgttttgctgacgttcaggagaagattgttctcctgacaccatctctccaggttgttgatctcctgaaggtaggccatctcatcgttgttggagatcaggcccaccacgacagtgtcgtcagcaaatttaatgatggtggtggagtttgtagtggccacacagtcatgtgtgtacagcgagtacagcaggg

Function

GO:

id name namespace
GO:0097458 obsolete neuron part cellular_component
GO:0001917 photoreceptor inner segment cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU226598 True 1289 lncRNA 0.47 1 15136335 15137623

Neighbor

gene id symbol gene type direction distance location
scamp4 scamp4,LOC107717975,LOC107699425,LOC107719549,LOC107679840,LOC107586414 coding upstream 739 15130400 ~ 15135596 (+)
ubxn6 LOC107717977,LOC107679838,LOC107593331,LOC107719551,LOC107699423,LOC107586413 coding upstream 16506 15114186 ~ 15119829 (+)
LOC122327882 LOC107679839,LOC107717989,LOC107719633,LOC107699428,LOC107586446 coding upstream 133365 15001033 ~ 15002970 (+)
lmcd1 lmcd1,LOC107662933 coding upstream 170748 14937292 ~ 14965587 (+)
gmppb gmppb coding upstream 199400 14928500 ~ 14936935 (+)
ddx59 ddx59,LOC107717990,LOC107578347 coding downstream 52204 15189827 ~ 15194872 (+)
LOC122327180 LOC107593352,LOC107717987,LOC107679830,LOC107593351,LOC107717988,LOC107679833 coding downstream 82824 15220447 ~ 15288892 (+)
aspm LOC107712224,LOC107699437,LOC107586448,LOC107556171,LOC107577714 coding downstream 598278 15735901 ~ 15752487 (+)
LOC122327224 NA coding downstream 741631 15879254 ~ 15886245 (+)
LOC122327226 LOC107556173 coding downstream 763509 15901132 ~ 15938182 (+)
G153065 NA non-coding upstream 24357 15110215 ~ 15111978 (+)
G153050 NA non-coding upstream 29409 15078846 ~ 15106926 (+)
G153056 NA non-coding upstream 46418 15087487 ~ 15089917 (+)
G153053 NA non-coding upstream 52681 15082920 ~ 15083654 (+)
G153039 NA non-coding upstream 65852 14969415 ~ 15070483 (+)
LOC122327701 NA non-coding downstream 153072 15290695 ~ 15311067 (+)
G153178 NA non-coding downstream 313826 15451449 ~ 15512639 (+)
G153180 NA non-coding downstream 316341 15453964 ~ 15454729 (+)
G153181 NA non-coding downstream 317289 15454912 ~ 15490268 (+)
G153182 NA non-coding downstream 330427 15468050 ~ 15516152 (+)
sirt7 sirt7,LOC107667823,LOC107705833,LOC107569249,LOC107706268 other upstream 347642 14782382 ~ 14788693 (+)
G152808 LOC107588428,LOC107689379,LOC107573874,LOC107753503 other upstream 444527 14686504 ~ 14691808 (+)
G152767 cp,LOC107572087,LOC107732248 other upstream 673675 14458149 ~ 14462660 (+)
ptk7a ptk7a,LOC107702250,LOC107732247,LOC107588446,LOC107550662,LOC107697061 other upstream 823199 14283892 ~ 14313136 (+)
kcnip2 kcnip2,LOC107714153,LOC107679051,LOC107551372 other upstream 1057955 14071476 ~ 14078380 (+)
kif14 kif14,LOC107679839,LOC107699428,LOC107719633,LOC107586446,LOC107717989 other downstream 58293 15195916 ~ 15219764 (+)
dennd1b dennd1b,LOC107712206,LOC107586420,LOC107664901,LOC107741568,LOC107556170 other downstream 485470 15623093 ~ 15712086 (+)
G153322 LOC107565915,LOC107680281,LOC107709523,LOC107565908,LOC107680280,LOC107706842,LOC107576284 other downstream 866941 16004564 ~ 16035615 (+)
LOC122327825 LOC107565915,LOC107680281,LOC107709523,LOC107680280,LOC107565908,LOC107706842 other downstream 939958 16077581 ~ 16078895 (+)
LOC122327131 NA other downstream 1025760 16163383 ~ 16171629 (+)

Expression


Co-expression Network