G153178


Basic Information

Item Value
gene id G153178
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 15451449 ~ 15512639 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU226731
TTAATACCATATGTTGTAAGGTAGTAAAGATCTGAGAACTTAAACAAGCATGTGTCCTGTGTATCTTCAGTGATAGTTTTTCCATTGTATGTGATTTCAGCTTTGAATTTCCCTTTTCCTCCATTCCAGACTATCTTAttgatttcacattttatttcaagagaATTGTGAGAAGCGTGAGTTACTTCAACTTTTGATTGGAAACTGGGCT
>TU226736
GGACTCTTTGGCTTTAATGAACGTCAGACTCTGAAAGACATTAGATGAGATTCAAATACCTTAATACCATATGTTGTAAGGTAGTAAAGATCTGAGAACTTAAACAAGCATGTGTCCTGTGTATCTTCAGTGATAGTTTCTCCTTTGTATGTGATTTCAGCTTTGAATTTCCCTTCTCCTCCATTCCAGACTATCTTTGGTCCAttgatttcacattttatttcaagagaATTGTGAGAAGCGTGAGTTACTTCAACTTTTGATTGGAAACTGGGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU226731 False 211 lncRNA 0.34 3 15451449 15512639
TU226736 True 277 lncRNA 0.36 2 15487299 15512639

Neighbor

gene id symbol gene type direction distance location
LOC122327180 LOC107593352,LOC107717987,LOC107679830,LOC107593351,LOC107717988,LOC107679833 coding upstream 162557 15220447 ~ 15288892 (+)
ddx59 ddx59,LOC107717990,LOC107578347 coding upstream 256577 15189827 ~ 15194872 (+)
scamp4 scamp4,LOC107717975,LOC107699425,LOC107719549,LOC107679840,LOC107586414 coding upstream 315853 15130400 ~ 15135596 (+)
ubxn6 LOC107717977,LOC107679838,LOC107593331,LOC107719551,LOC107699423,LOC107586413 coding upstream 331620 15114186 ~ 15119829 (+)
LOC122327882 LOC107679839,LOC107717989,LOC107719633,LOC107699428,LOC107586446 coding upstream 448479 15001033 ~ 15002970 (+)
aspm LOC107712224,LOC107699437,LOC107586448,LOC107556171,LOC107577714 coding downstream 223262 15735901 ~ 15752487 (+)
LOC122327224 NA coding downstream 366615 15879254 ~ 15886245 (+)
LOC122327226 LOC107556173 coding downstream 388493 15901132 ~ 15938182 (+)
LOC122327890 NA coding downstream 431094 15943733 ~ 15956310 (+)
LOC122327228 LOC107565915,LOC107709523,LOC107680281,LOC107565908,LOC107706842,LOC107680280 coding downstream 586092 16098731 ~ 16099807 (+)
LOC122327701 NA non-coding upstream 140382 15290695 ~ 15311067 (+)
G153083 NA non-coding upstream 313826 15136335 ~ 15137623 (+)
G153065 NA non-coding upstream 339471 15110215 ~ 15111978 (+)
G153050 NA non-coding upstream 344523 15078846 ~ 15106926 (+)
G153227 LOC107741548,LOC107664650,LOC107712228,LOC107586421,LOC107699436 non-coding downstream 217138 15729777 ~ 15734653 (+)
G153237 NA non-coding downstream 247866 15760505 ~ 15762668 (+)
G153239 NA non-coding downstream 254082 15766721 ~ 15767556 (+)
LOC122327891 NA non-coding downstream 261066 15773705 ~ 15893138 (+)
G153244 NA non-coding downstream 282800 15795439 ~ 15802159 (+)
kif14 kif14,LOC107679839,LOC107699428,LOC107719633,LOC107586446,LOC107717989 other upstream 231685 15195916 ~ 15219764 (+)
sirt7 sirt7,LOC107667823,LOC107705833,LOC107569249,LOC107706268 other upstream 662756 14782382 ~ 14788693 (+)
G152808 LOC107588428,LOC107689379,LOC107573874,LOC107753503 other upstream 759641 14686504 ~ 14691808 (+)
G152767 cp,LOC107572087,LOC107732248 other upstream 988789 14458149 ~ 14462660 (+)
ptk7a ptk7a,LOC107702250,LOC107732247,LOC107588446,LOC107550662,LOC107697061 other upstream 1138313 14283892 ~ 14313136 (+)
dennd1b dennd1b,LOC107712206,LOC107586420,LOC107664901,LOC107741568,LOC107556170 other downstream 110454 15623093 ~ 15712086 (+)
G153322 LOC107565915,LOC107680281,LOC107709523,LOC107565908,LOC107680280,LOC107706842,LOC107576284 other downstream 491925 16004564 ~ 16035615 (+)
LOC122327825 LOC107565915,LOC107680281,LOC107709523,LOC107680280,LOC107565908,LOC107706842 other downstream 564942 16077581 ~ 16078895 (+)
LOC122327131 NA other downstream 650744 16163383 ~ 16171629 (+)
rpl32 rpl32,LOC107691188,LOC107719943,LOC107720357 other downstream 804748 16317387 ~ 16386176 (+)

Expression


Co-expression Network