G153182


Basic Information

Item Value
gene id G153182
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 15468050 ~ 15516152 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU226742
aaacaaattaattaccttcattataattacattacGCTATGAAATGTTTAATCATTGCTTCTGAGACTCAACATAGTGAATGGCCTTTGTGCCATTCCTCCTAACTATACCTGATTGTGTGACTAGATTAATTGCATTATTGGCACTTGCAATGGATTCTTTTCTGCTCGCAGATCGAATCGTTGAAAATCAACAAACCAAAAGCAGCACTCACCACAAAGagttatgtaaatatatttaaaatcacatttgatttaatacttactctttattaatattagctaataaaatgtgttaacatgaacaagaaataaaaacagaaaagctcTAAATGCTGTATAGTTGAAATACCTGAAAAACTGTAACTactagttaatgcattaactaacattaactaatGGGAAATCATGGTATGATGTTAaaattgaagaaaaacacaaaaagaattGGTGCAGCAAgtcaacaataaaatacatgagAAGTTAAAGTTgaaaaatgaactcaaaactgAATTcatcaacgtttttttttatgatgtcaaAAATGGTACACATTTTTAACTGTGTGCATCTACGcatcttttaaaaagatttctcCTTACATCCTTACTTCACATATTCAGAGTTACTTTTTTGTAGaagtaataaacattttcaagaaATGTCTTAATGAAAGAACCTGCTTCAGATTTTTACTATTACCTTTTTCACTTGATTTTGAGGTTTGTTCAGGAGTGTGTGAGGGTGAGGGCTCTGATTCTAAAATTAAAAGCGGGTTCATTTTAGATGGTCCAGTACAGGATTTAACTACAAACATACTAAAAGTATAAAGGcaatacaaaagaacaaaacatatTCTTGATCGGTTACATGTGCTCATGGCACGGCATGGTGGGAAGCTGGAGGTCAGAGTGTGAGAGTATAATAATGCAGGAGTGTGAGTTTGATGACAGCTTTACCTTTGCTGGGGGTGACTGCAGGTGAGTTTGATGAAGTGGATGAAGTGGTGAGATTTGACTGAGTGGCTGTAATGATGGATTGACAGCATGAAACAATATCTAAGCATCGAGTTTTCACGTATACATTTTTGAGCCAAAAGTACAAccttatataaaacaaaaatggttacacagtcacacagacacacatacaacagACTGGAAGCATcaacataaacatttatatcTAAGAAAAAGCTACTTGATTTTGACTAGATTACAATATCTAGTACATCCTTACGCACACGTTTCTTTTTAACCAAAACAGGTGCTTAAGATTTTGAATACATTACATGAGAAACActccactatttttgaaaataggctcattttccaactcccctagatTTAAAGACTTGAGTTTTAGTCTTTCGAATGAATTCAGCCACTCTCAGGGTGATTAGGCCTGTAGTGtcacgctcaaaaatgaccaaagagtttaaatatttttcttattttgaaaCTCGACACTTCTACAGTTACAGCGTGTACTAAGACTGATGGAAAATTCAAAGTTGCGTTTCCAGGCTGATATAACCAGGAACTATTCCGGTGTAACAGTCAAGAAACTTCACTGCCGTACTATGGCCGCAGCAGATGCAGTGATATTACGCAGCATCTTCAAAATGATGGGGACTCTTTGGTCCTTTTTGAGGGAGATGTTAAaagtctaatcagattcaatgatccaTGCTAAGCGACGACTAAAAGTCCTACATCAGACCTGGAGAAcgactgaatggattcaaaaatgataaaactcaactgtttaactctagggagttggaaaattagcctattttcaaaattaGCTCTctcaaaaaataagtaatagtaaacgaaacatacaaaatatctAACAACTTGATCAGGAACGGCATGATGGGAAGCTGGAGGTCAGAGTGTGAGAGTATAATAATGCAGGGGTGTGAGTTTGATGACAGCTTTACCTTTGCTGGGGGTGTCTGCAGGTGAGTTTGATGAAGTGGAAGGAGTGGTGAGCTTTGACTGAGTGGCTGTAATGATGGATTGACAGCATGAAACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU226742 True 2043 lncRNA 0.35 2 15468050 15516152

Neighbor

gene id symbol gene type direction distance location
LOC122327180 LOC107593352,LOC107717987,LOC107679830,LOC107593351,LOC107717988,LOC107679833 coding upstream 179158 15220447 ~ 15288892 (+)
ddx59 ddx59,LOC107717990,LOC107578347 coding upstream 273178 15189827 ~ 15194872 (+)
scamp4 scamp4,LOC107717975,LOC107699425,LOC107719549,LOC107679840,LOC107586414 coding upstream 332454 15130400 ~ 15135596 (+)
ubxn6 LOC107717977,LOC107679838,LOC107593331,LOC107719551,LOC107699423,LOC107586413 coding upstream 348221 15114186 ~ 15119829 (+)
LOC122327882 LOC107679839,LOC107717989,LOC107719633,LOC107699428,LOC107586446 coding upstream 465080 15001033 ~ 15002970 (+)
aspm LOC107712224,LOC107699437,LOC107586448,LOC107556171,LOC107577714 coding downstream 219749 15735901 ~ 15752487 (+)
LOC122327224 NA coding downstream 363102 15879254 ~ 15886245 (+)
LOC122327226 LOC107556173 coding downstream 384980 15901132 ~ 15938182 (+)
LOC122327890 NA coding downstream 427581 15943733 ~ 15956310 (+)
LOC122327228 LOC107565915,LOC107709523,LOC107680281,LOC107565908,LOC107706842,LOC107680280 coding downstream 582579 16098731 ~ 16099807 (+)
G153180 NA non-coding upstream 13321 15453964 ~ 15454729 (+)
LOC122327701 NA non-coding upstream 156983 15290695 ~ 15311067 (+)
G153083 NA non-coding upstream 330427 15136335 ~ 15137623 (+)
G153065 NA non-coding upstream 356072 15110215 ~ 15111978 (+)
G153056 NA non-coding upstream 378133 15087487 ~ 15089917 (+)
G153227 LOC107741548,LOC107664650,LOC107712228,LOC107586421,LOC107699436 non-coding downstream 213625 15729777 ~ 15734653 (+)
G153237 NA non-coding downstream 244353 15760505 ~ 15762668 (+)
G153239 NA non-coding downstream 250569 15766721 ~ 15767556 (+)
LOC122327891 NA non-coding downstream 257553 15773705 ~ 15893138 (+)
G153244 NA non-coding downstream 279287 15795439 ~ 15802159 (+)
kif14 kif14,LOC107679839,LOC107699428,LOC107719633,LOC107586446,LOC107717989 other upstream 248286 15195916 ~ 15219764 (+)
sirt7 sirt7,LOC107667823,LOC107705833,LOC107569249,LOC107706268 other upstream 679357 14782382 ~ 14788693 (+)
G152808 LOC107588428,LOC107689379,LOC107573874,LOC107753503 other upstream 776242 14686504 ~ 14691808 (+)
G152767 cp,LOC107572087,LOC107732248 other upstream 1005390 14458149 ~ 14462660 (+)
ptk7a ptk7a,LOC107702250,LOC107732247,LOC107588446,LOC107550662,LOC107697061 other upstream 1154914 14283892 ~ 14313136 (+)
dennd1b dennd1b,LOC107712206,LOC107586420,LOC107664901,LOC107741568,LOC107556170 other downstream 106941 15623093 ~ 15712086 (+)
G153322 LOC107565915,LOC107680281,LOC107709523,LOC107565908,LOC107680280,LOC107706842,LOC107576284 other downstream 488412 16004564 ~ 16035615 (+)
LOC122327825 LOC107565915,LOC107680281,LOC107709523,LOC107680280,LOC107565908,LOC107706842 other downstream 561429 16077581 ~ 16078895 (+)
LOC122327131 NA other downstream 647231 16163383 ~ 16171629 (+)
rpl32 rpl32,LOC107691188,LOC107719943,LOC107720357 other downstream 801235 16317387 ~ 16386176 (+)

Expression


Co-expression Network