G153227 (LOC107741548,LOC107664650,LOC107712228,LOC107586421,LOC107699436)


Basic Information

Item Value
gene id G153227
gene name LOC107741548,LOC107664650,LOC107712228,LOC107586421,LOC107699436
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 15729777 ~ 15734653 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU226811
GTGTATCCAGGCCTGCAGAGACAGATGTAGTGCCCGATCTTGTCCAGACAGGTGGCTCCGTTCCTGCAGGGCCACGACACGCATTCATTCACCTCGATCTCGCAGTGTTTACCCTGGAATCCCGGCACGCAGAAGCAGGTGGGGCCGTCCCTTCTGCTGCGGCAGATGGCGCGGTTGCGGCAAGGGTTGGGGGAGCAGCGGTCCACCTTTTTCTCGCAGGAACTCCCGGTGTAACCCTCTTGACAGATGCAGACGTACCCCGGGCTCCTCTCTTGCACCGCCAGACATCGGGGAGTGTCCCCACACAGCCCCCGAGCGCAGAGCTGGGCACTGGTATGACAGTCCCGCCCCGACGAGCCGGCCTCACACTGGCAAACCAGTTCCCCCGGGTGGACGCCGGTTGGTTGACACGTCGCATTGCCCTGGCAGATGGACAGTTGGCAGAGCGCGCTGGAAGGATCGCAAGGCGTGCTGGGCAGGACTGGTGCAGGCGACTGACACTGGCACAGGAAGTCAGTTGGGGCATCCCTGCACTCTGCCCTGTTTTGGCAAGGCTTGTCCAGGCAGAGCGTTGAGGTCTCGGGAAGTGTTAAACCTATTTCTGTCCACTGTAGAAGAACAAACAAGACACATGCAACTAGTCTGAGCCACACTGAACCCAAGCCCGTAAGATCCATATCCATACTCGGATGTCATTGTGATAGCGGGCAAGCTGGCATGATAACGGTGTGTAACTCGAGCATCCTCCagagtgtctgtctgttt

Function

NR:

description
PREDICTED: protein crumbs homolog 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU226811 True 765 lncRNA 0.59 2 15729777 15734653

Neighbor

gene id symbol gene type direction distance location
LOC122327180 LOC107593352,LOC107717987,LOC107679830,LOC107593351,LOC107717988,LOC107679833 coding upstream 440885 15220447 ~ 15288892 (+)
ddx59 ddx59,LOC107717990,LOC107578347 coding upstream 534905 15189827 ~ 15194872 (+)
scamp4 scamp4,LOC107717975,LOC107699425,LOC107719549,LOC107679840,LOC107586414 coding upstream 594181 15130400 ~ 15135596 (+)
ubxn6 LOC107717977,LOC107679838,LOC107593331,LOC107719551,LOC107699423,LOC107586413 coding upstream 609948 15114186 ~ 15119829 (+)
LOC122327882 LOC107679839,LOC107717989,LOC107719633,LOC107699428,LOC107586446 coding upstream 726807 15001033 ~ 15002970 (+)
aspm LOC107712224,LOC107699437,LOC107586448,LOC107556171,LOC107577714 coding downstream 1248 15735901 ~ 15752487 (+)
LOC122327224 NA coding downstream 144601 15879254 ~ 15886245 (+)
LOC122327226 LOC107556173 coding downstream 166479 15901132 ~ 15938182 (+)
LOC122327890 NA coding downstream 209080 15943733 ~ 15956310 (+)
LOC122327228 LOC107565915,LOC107709523,LOC107680281,LOC107565908,LOC107706842,LOC107680280 coding downstream 364078 16098731 ~ 16099807 (+)
G153182 NA non-coding upstream 213625 15468050 ~ 15516152 (+)
G153178 NA non-coding upstream 217138 15451449 ~ 15512639 (+)
G153181 NA non-coding upstream 239509 15454912 ~ 15490268 (+)
G153180 NA non-coding upstream 275048 15453964 ~ 15454729 (+)
LOC122327701 NA non-coding upstream 418710 15290695 ~ 15311067 (+)
G153237 NA non-coding downstream 25852 15760505 ~ 15762668 (+)
G153239 NA non-coding downstream 32068 15766721 ~ 15767556 (+)
LOC122327891 NA non-coding downstream 39052 15773705 ~ 15893138 (+)
G153244 NA non-coding downstream 60786 15795439 ~ 15802159 (+)
G153233 NA non-coding downstream 61177 15795830 ~ 15814086 (+)
dennd1b dennd1b,LOC107712206,LOC107586420,LOC107664901,LOC107741568,LOC107556170 other upstream 17691 15623093 ~ 15712086 (+)
kif14 kif14,LOC107679839,LOC107699428,LOC107719633,LOC107586446,LOC107717989 other upstream 510013 15195916 ~ 15219764 (+)
sirt7 sirt7,LOC107667823,LOC107705833,LOC107569249,LOC107706268 other upstream 941084 14782382 ~ 14788693 (+)
G152808 LOC107588428,LOC107689379,LOC107573874,LOC107753503 other upstream 1037969 14686504 ~ 14691808 (+)
G152767 cp,LOC107572087,LOC107732248 other upstream 1267117 14458149 ~ 14462660 (+)
G153322 LOC107565915,LOC107680281,LOC107709523,LOC107565908,LOC107680280,LOC107706842,LOC107576284 other downstream 269911 16004564 ~ 16035615 (+)
LOC122327825 LOC107565915,LOC107680281,LOC107709523,LOC107680280,LOC107565908,LOC107706842 other downstream 342928 16077581 ~ 16078895 (+)
LOC122327131 NA other downstream 428730 16163383 ~ 16171629 (+)
rpl32 rpl32,LOC107691188,LOC107719943,LOC107720357 other downstream 582734 16317387 ~ 16386176 (+)
G153432 slc6a6b,LOC107567309,LOC107676359,LOC107719944,LOC107562730 other downstream 759049 16493702 ~ 16499413 (+)

Expression


Co-expression Network