rpl32 (rpl32,LOC107691188,LOC107719943,LOC107720357)


Basic Information

Item Value
gene id rpl32
gene name rpl32,LOC107691188,LOC107719943,LOC107720357
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 16317387 ~ 16386176 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU227165
TTATTTCCAGGGCGCCGCTGCGTcacttcctcctcttcttcaggACTGTCTTCGGCGGAGGCAGGCCCACCGGCATCATGGCTCAGCTCAGGCCTCTCACCAGACCTAAAATCGTCAAGAAAAGGACCAAGAAGTTCATCAGACATCAGTCCGACCGCTATGTCAAGATCAGGCAAAACTGGAGGAAGCCCAGAGGTATCGACAACAGAGTGCGCAGACGCTTCAAGGGTCAGATGTTGATGCCCAACATCGGTTACGGGAGTAACAAGAAGACCAAACACATGCTGCCCTCTGGATTCAGGAAGTTCTTGGTCCACAATGTCAAGGAACTTGAAGTCCTCATGATGAGCAACAAGTCCCACTGTGCAGAGATCGCCCACAATGTTTCTTCAAAGAACAGGAAGCTCATTGTAGAGCGGGCCGCTCAGTTGGCCATCAAGGTCACAAACCCCAACGCCAGACTCCGCAGCGAGGAGAACGAATAATCTGCTCATCTTGTCTTTTCAATAAAGTGGGGAAAAAGAGCaaaaagtaaaaaaaaaaaaaaaaaaaaaaaaaaaaat
>XM_043222222.1
ATTAAACTGAATCAGTTTGACACATGTCGTGGACGGACACATTTCAGAGCAACAGCGACTTCCGCTGCCGGATATTATTTCCAGGGCGCCGCTGCGTcacttcctcctcttcttcaggACTGTCTTCGGCGGAGGCAGGCCCACCGGCATCATGGCTCAGCTCAGGCCTCTCACCAGACCTAAAATCGTCAAGAAAAGGACCAAGAAGTTCATCAGACATCAGTCCGACCGCTATGTCAAGATCAGGCAAAACTGGAGGAAGCCCAGAGGTATCGACAACAGAGTGCGCAGACGCTTCAAGGGTCAGATGTTGATGCCCAACATCGGTTACGGGAGTAACAAGAAGACCAAACACATGCTGCCCTCTGGATTCAGGAAGTTCTTGGTCCACAATGTCAAGGAACTTGAAGTCCTCATGATGAGCAACAAGTCCCACTGTGCAGAGATCGCCCACAATGTTTCTTCAAAGAACAGGAAGCTCATTGTAGAGCGGGCCGCTCAGTTGGCCATCAAGGTCACAAACCCCAACGCCAGACTCCGCAGCGAGGAGAACGAATAATCTGCTCATCTTGTCTTTTCAATAAAGTGGGGAAAAAGA

Function

symbol description
rpl32 Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Orthologous to human RPL32 (ribosomal protein L32).

NR:

description
PREDICTED: 60S ribosomal protein L32

GO:

id name namespace
GO:0006412 translation biological_process
GO:0022625 cytosolic large ribosomal subunit cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02912 RP-L32e, RPL32; large subunit ribosomal protein L32e

RNA

RNA id representative length rna type GC content exon number start site end site
TU227165 False 563 TUCP 0.48 5 16317461 16386176
XM_043222222.1 True 598 mRNA 0.51 4 16317387 16319378

Neighbor

gene id symbol gene type direction distance location
LOC122328055 NA coding upstream 72845 16241163 ~ 16244542 (+)
LOC122327679 NA coding upstream 80366 16233607 ~ 16237021 (+)
LOC122327230 LOC107574244,LOC106946732 coding upstream 161836 16153142 ~ 16155551 (+)
trnaa-agc_28 NA coding upstream 167543 16149772 ~ 16149844 (+)
trnaa-agc_27 NA coding upstream 170250 16147065 ~ 16147137 (+)
manf manf,LOC107677041,LOC107691893,LOC107592842,LOC107750980,LOC107567190,LOC107708486 coding downstream 364537 16750713 ~ 16752754 (+)
rbm15b rbm15b,LOC107592829,LOC107750977,LOC107708489,LOC107567194,LOC107691881,LOC107677039 coding downstream 366727 16752903 ~ 16756930 (+)
dag1 dag1,LOC107592827,LOC107757307,LOC107691879,LOC107564392,LOC107708488,LOC107678152 coding downstream 654486 17040662 ~ 17069967 (+)
srfa srfa,LOC107568266,LOC107679061,LOC107720394,LOC107551382,LOC107706117 coding downstream 967641 17353817 ~ 17369897 (+)
rnf13 rnf13,LOC107551383,LOC107568264,LOC106613488 coding downstream 984979 17371155 ~ 17388079 (+)
G153399 NA non-coding upstream 11737 16303731 ~ 16305650 (+)
G153364 NA non-coding upstream 66414 16250440 ~ 16250973 (+)
G153321 NA non-coding upstream 334565 15982592 ~ 15982822 (+)
G153320 NA non-coding upstream 336041 15981122 ~ 15981346 (+)
G153236 NA non-coding upstream 480633 15835260 ~ 15836754 (+)
G153418 NA non-coding downstream 34476 16420652 ~ 16481470 (+)
G153434 NA non-coding downstream 115578 16501754 ~ 16502104 (+)
LOC122327176 NA non-coding downstream 136454 16522630 ~ 16526808 (+)
LOC122328065 NA non-coding downstream 148843 16535019 ~ 16545350 (+)
G153501 NA non-coding downstream 168757 16554933 ~ 16556610 (+)
LOC122327131 NA other upstream 145758 16163383 ~ 16171629 (+)
LOC122327825 LOC107565915,LOC107680281,LOC107709523,LOC107680280,LOC107565908,LOC107706842 other upstream 238492 16077581 ~ 16078895 (+)
G153322 LOC107565915,LOC107680281,LOC107709523,LOC107565908,LOC107680280,LOC107706842,LOC107576284 other upstream 281772 16004564 ~ 16035615 (+)
dennd1b dennd1b,LOC107712206,LOC107586420,LOC107664901,LOC107741568,LOC107556170 other upstream 605301 15623093 ~ 15712086 (+)
kif14 kif14,LOC107679839,LOC107699428,LOC107719633,LOC107586446,LOC107717989 other upstream 1097623 15195916 ~ 15219764 (+)
G153432 slc6a6b,LOC107567309,LOC107676359,LOC107719944,LOC107562730 other downstream 107526 16493702 ~ 16499413 (+)
dock3 dock3,LOC107592830,LOC107691882,LOC107567192 other downstream 214454 16600630 ~ 16749928 (+)
tsc22d2 tsc22d2,LOC107732673,LOC107679060,LOC107701225,LOC107568259,LOC107720398,LOC107551385 other downstream 1013129 17399305 ~ 17419244 (+)
G153741 LOC107661227 other downstream 1540175 17926351 ~ 17927244 (+)

Expression


Co-expression Network