G153418


Basic Information

Item Value
gene id G153418
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 16420652 ~ 16481470 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU227176
CCCTTTAGCTGTTCTCTCTTACATTTATAAACACCGCCCCCTTTAGCTGTTCTTCAAAACTGGAAGGGTTTCAAGAGACGCACAACAGCGGGAAACCAGTCTCTGTTATTAAAACACACCCTGAGACTGCACATTAATCTCTGTATTGCTAAAAATTGTGCCTCTTtcaacattaacatttacattttttttttttctgtgatgaaGCATCCCAAATGTACCAAAGTAGAAGTTGTCGAGTTAAATTGAGCATCTCCCTTTGCGATTGGCTACGGTGTTAACTTGGCCAAGTCAAAAGAAATCATATTAAATCCAATAAATTTAATCCAAAACATTGGCATAATCCTTAAAATTAAGCTTTactttctcatttttaaaaaagtataaattgtCACAGTAAGTAGATCTGCATTGAGTTTTTGGTGTTAATGCAGCATACCATTTACGGTAGCTTAAATTGGCCCCTATTCATtgtttctgaaatattacaacagCTTAAAAATACGCAATTCCACACTTCCAAAGTACCAACTTTCTGAAAGACAGGTGAAGAAACAATGCATTTCGTTCTACAAAGTATTGCACATTACAGTTCGCAGCAAGCTTTTCTTTGTCGATTAACAGTTGTGGACGAGATCTATTGGTAATTGCTGGACAGAACAGTCAAATACAGTGATATTTTTGAATACAAAAGGCAAATGTgattggaaataaaaacaaacagatttgATACAAAATGCACGAAACTACCCTGAATCTACGTGGATTTTCGATCTTGCAGGCAGCTTAACGTTCTGACTTCCCAAAATCAGAATGTGTTTGGTGACTGTGAATCAATGAGGGCGGCGTACGGATAGCACGGCGGATGTCCTTCGCAAACTAGAAAGTTGCGGCTAACGTCTCCGCTACAAACGTCGATCGCCGTGAACGCATCTTAACAACGGGGAAGAGACTGCTAAAAATGAGTGTGCTGCGCTTTTCCGAAATCTTGCGACGCCGGAAAGTTCACAACAACGTTCTGTTAGACCTTCCGTTGTGGAACTTGAAATCCACAAATCTGTTATCATGCATCCGGGCCAGTAGTTGGCGATGTCACTTGGTAAAGAAACACTACGCACTTACGAACTGAACAAGCTCGTGGCGTTACTACTTTCACAAATGTGCGTTTTAATAGTTTACACGGAGACGCTAATGCTATTCCttattaaaaacttttcaacaagtatgcatttaaaaagaagaacTAATTCGGTTAAATGTTTTGGACCCCTTTGACTTTTGTTGTATAGACAAAAATGCCAAATCATTCTTCATCCGTTTTGCAGAAAaatgaaagtcatacaggtttggaacgaatttcaattttttttcgttctttctttcgtAAACTATCCATTTAAATGGTGGGTGCACCAGTATGGAGAATGTAGTGTCCTTAGTGGTatagtgcattaaaaacaagcagTGTTAACGGCTCGGTTCTTCGGGACAGCACCATCTCCAGTCTAAACAGTTTGTCGGGACACACTTAAAGAGCTACATTAATGCATGACCACTTCTATCCCTAAAAAGACGACTATTTCACGTTTGGGGAGGATGACATCTTTGTACACGAATCTGTACTTTTCGCAATTCACGTTTCCGGAGccctttgtgtttttgtttttttttcccatgattCTCGATTCTcttacaaatatacacagcttAGTTTGATTTCGATATGTACAAGatagaagttaaaaaaaatagaacggGCATGGTTCTACGTTCAGGATACTGCTGTTTGCGATCTGTTCTCTGTCTATTAACAGCGacaataatagtaaatataatagtattatgataaaaatattaaaaatacagacagaAAAATTTAACTTTCTctgtagaaaacaaaaaaaacaaaacaaggacTCCTAGTGCAGATGCGTAGCAATGTAAACCTGGTCCTACGACTATGTCAAAAGTTACagagtatatttttaatatatgcatatagaatcacatatatatgtaatggaAAAGCAGGTCATTGAATCCTCTCACAGAGAGCGTTCACATCATAGTCTCTACGATGGTGTGGGTGGGCTTCGTCAAGCCTCCGTTCCAGTTGGGGTCCAGCGGCTGCGCCAGCTCATTGCATTTAGGCTGGTAGTCTTGGGGACAAGAACTGGCTCCTCCCCTCACGGGTGCTGCCACCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227176 True 2205 lncRNA 0.39 2 16420652 16481470

Neighbor

gene id symbol gene type direction distance location
sec13 sec13,LOC107719942,LOC107557974,LOC107691189,LOC107657312 coding upstream 83534 16329725 ~ 16337118 (+)
LOC122328055 NA coding upstream 176110 16241163 ~ 16244542 (+)
LOC122327679 NA coding upstream 183631 16233607 ~ 16237021 (+)
LOC122327230 LOC107574244,LOC106946732 coding upstream 265101 16153142 ~ 16155551 (+)
trnaa-agc_28 NA coding upstream 270808 16149772 ~ 16149844 (+)
manf manf,LOC107677041,LOC107691893,LOC107592842,LOC107750980,LOC107567190,LOC107708486 coding downstream 269243 16750713 ~ 16752754 (+)
rbm15b rbm15b,LOC107592829,LOC107750977,LOC107708489,LOC107567194,LOC107691881,LOC107677039 coding downstream 271433 16752903 ~ 16756930 (+)
dag1 dag1,LOC107592827,LOC107757307,LOC107691879,LOC107564392,LOC107708488,LOC107678152 coding downstream 559192 17040662 ~ 17069967 (+)
srfa srfa,LOC107568266,LOC107679061,LOC107720394,LOC107551382,LOC107706117 coding downstream 872347 17353817 ~ 17369897 (+)
rnf13 rnf13,LOC107551383,LOC107568264,LOC106613488 coding downstream 889685 17371155 ~ 17388079 (+)
G153399 NA non-coding upstream 115002 16303731 ~ 16305650 (+)
G153364 NA non-coding upstream 169679 16250440 ~ 16250973 (+)
G153321 NA non-coding upstream 437830 15982592 ~ 15982822 (+)
G153320 NA non-coding upstream 439306 15981122 ~ 15981346 (+)
G153236 NA non-coding upstream 583898 15835260 ~ 15836754 (+)
G153434 NA non-coding downstream 20284 16501754 ~ 16502104 (+)
LOC122327176 NA non-coding downstream 41160 16522630 ~ 16526808 (+)
LOC122328065 NA non-coding downstream 53549 16535019 ~ 16545350 (+)
G153501 NA non-coding downstream 73463 16554933 ~ 16556610 (+)
G153504 NA non-coding downstream 84582 16566052 ~ 16566670 (+)
rpl32 rpl32,LOC107691188,LOC107719943,LOC107720357 other upstream 34476 16317387 ~ 16386176 (+)
LOC122327131 NA other upstream 249023 16163383 ~ 16171629 (+)
LOC122327825 LOC107565915,LOC107680281,LOC107709523,LOC107680280,LOC107565908,LOC107706842 other upstream 341757 16077581 ~ 16078895 (+)
G153322 LOC107565915,LOC107680281,LOC107709523,LOC107565908,LOC107680280,LOC107706842,LOC107576284 other upstream 385037 16004564 ~ 16035615 (+)
dennd1b dennd1b,LOC107712206,LOC107586420,LOC107664901,LOC107741568,LOC107556170 other upstream 708566 15623093 ~ 15712086 (+)
G153432 slc6a6b,LOC107567309,LOC107676359,LOC107719944,LOC107562730 other downstream 12232 16493702 ~ 16499413 (+)
dock3 dock3,LOC107592830,LOC107691882,LOC107567192 other downstream 119160 16600630 ~ 16749928 (+)
tsc22d2 tsc22d2,LOC107732673,LOC107679060,LOC107701225,LOC107568259,LOC107720398,LOC107551385 other downstream 917835 17399305 ~ 17419244 (+)
G153741 LOC107661227 other downstream 1444881 17926351 ~ 17927244 (+)

Expression


Co-expression Network