G153432 (slc6a6b,LOC107567309,LOC107676359,LOC107719944,LOC107562730)


Basic Information

Item Value
gene id G153432
gene name slc6a6b,LOC107567309,LOC107676359,LOC107719944,LOC107562730
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 16493702 ~ 16499413 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU227194
CTCCGCCATTTTTGTAGCAGAGGTACGGGAACCGCCAGACGTTGCCTAAACCAACGAAGCCCCCGGCGACTGACAGAAGAAAGTCAAGCTTGCTAGCCCACTTTTCCCTTTGGGGGTGTTTCCCCTCTGCTTCATCCTCCGGCCTCGTGCCTGGGCTCTTTCCCGGGGAGGGTTTCAGAATGTCTTTGTGGAAGTCTTTGAGACACTGAAGTTTCTCCTTCTGGGCCATGCCGGGTCGGTGAACCGCATTAAGAAAGTGTGCTGTTCTTTTTCATGTTGTTGAATTTTTAGGAAACTTGTAGCTTACTGAACACACATTTTGCATCATCCAAGCCTGCTCAATCTGAAAATTTGCCTAAAagaaagcaacaacaacaacaacaacaacaacagaaaagcTGGAAAAGTTCAAAGTCTAAAGTGGTAAACTAAATTCTGGGCAGAGCTGTTTGTTGGCAGTCATGACAGTATGGCCTTTGTTAACAAGTCTTACTTTTTATTGACATCAATTAAAAAGCAGCCGATAGGCTCATATATTTGCAGTTTTCTTTTATGGCACACTAAGCTGTAGACAACACACCGAATAACATCTTAGCTGTCGTCGCTCTCACTAAATGGCAAAATGGCATCTGTCCCAAATGCATTGTGGCTGTTATCCTTATCAGTGTGCTAGGTATTCAAGCTGGCGTGTGCGCAGAAACCTAAACTCTGCATCctgtattgtgtttgtttgagcaaGCGAGCTGCCTGACTTCCGCGTAACCCAAAGTGGGCTTCGGGATGAGGTGAACCTGTTCGCCAGGATGCTGGTTCCCGAGAAAACCTGTCTCTTTAAACCGGCTCGCAGCCTCTCGTTGCTTAGCATCGCGTTTTTAATAAAAGCGCGTCGAGCCGTTCGCGCACGTGTCCGCAGACTGCTTTTTAGAAAGGAGGAACCTGAAGCGAGACGGCGTTCTCAGAAGCGTCCCGTACACCAAGaacgttttctttttaaacgcCCTCGACTTGCTTTCGGTTCCACTTCGCGAGGAGAACGCGTCCTCGCGCGAACCGTCGCTAACAACGTCACCAGACCCACATCCGACGTCTTCGAGGAGGCGAGCCCGTGTCACAAAGTTTCGCGAAACGTTGCCGTTTTTCTCGAGAACGCATCCAACAGGTTGCCGACGCGCCGGCCGCTTCTCGTTGGGTTCGACGCGACGCGTGTTTCCATCGAGCGTCTATTCTTACCTCCATGAAGTCAGCGCTCAGTTATACTGGTCTGAGTGGGAGTGTAAGAAACTCAATGACAAGTGACAGCATCAACACGAACGCGCCGAGCAGCACTTTAAATCATCACGAATCATAAAAGCATTCTCTCGTTATCTTTATCATACACACCCCGGCTGCATCGCCGCTTAAAATAGGCTCATGACATTTTCCAAAACCttctaaataaagtgttaaagtaCTTCCTGGCTCCCTTAAACTCTTCTCAGAATGAGTGACAACTAAGACGAGCTGCTGACTTTTAGGTAACGATGTGAGAAGAGCTTTCAAAAGATCCCGAAAAGCTtgtaaattaagcaaaaaaatgaaattgagaCACCAGGGCTCTCACATCCGTGCGCTGCACTAAACCCCAAAGAGCAAACATGAGAAATAACGTTACCTTTAATGTTTATCTACTTTAATTCCTCTCAAACGCTCGTGTCCCTTCTGTATTGTGCGACGGCTCGGTGCTGAATAACAGCGGCGGCGGTAAATTTAGtttatgagttttttttcctgacctTTGTCTCTCAACATGGGTGACCATCAGTTGTGGAAAAACACCGGCCTGCCTCCCGTCCGCGGCAGCAGCGCGTCTTCTTAAAGCGCCCGCTTC

Function

symbol description
slc6a6b Enables taurine:sodium symporter activity. Acts upstream of or within taurine transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including blastomere; cardiovascular system; nervous system; optic vesicle; and presumptive neural retina. Orthologous to human SLC6A6 (solute carrier family 6 member 6).

NR:

description
PREDICTED: sodium- and chloride-dependent taurine transporter-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227194 True 1867 TUCP 0.48 2 16493702 16499413

Neighbor

gene id symbol gene type direction distance location
grip2b LOC107719945,LOC108436697,LOC107720331 coding upstream 16091 16382185 ~ 16477611 (+)
sec13 sec13,LOC107719942,LOC107557974,LOC107691189,LOC107657312 coding upstream 156584 16329725 ~ 16337118 (+)
LOC122328055 NA coding upstream 249160 16241163 ~ 16244542 (+)
LOC122327679 NA coding upstream 256681 16233607 ~ 16237021 (+)
LOC122327230 LOC107574244,LOC106946732 coding upstream 338151 16153142 ~ 16155551 (+)
manf manf,LOC107677041,LOC107691893,LOC107592842,LOC107750980,LOC107567190,LOC107708486 coding downstream 251300 16750713 ~ 16752754 (+)
rbm15b rbm15b,LOC107592829,LOC107750977,LOC107708489,LOC107567194,LOC107691881,LOC107677039 coding downstream 253490 16752903 ~ 16756930 (+)
dag1 dag1,LOC107592827,LOC107757307,LOC107691879,LOC107564392,LOC107708488,LOC107678152 coding downstream 541249 17040662 ~ 17069967 (+)
srfa srfa,LOC107568266,LOC107679061,LOC107720394,LOC107551382,LOC107706117 coding downstream 854404 17353817 ~ 17369897 (+)
rnf13 rnf13,LOC107551383,LOC107568264,LOC106613488 coding downstream 871742 17371155 ~ 17388079 (+)
G153418 NA non-coding upstream 12232 16420652 ~ 16481470 (+)
G153399 NA non-coding upstream 188052 16303731 ~ 16305650 (+)
G153364 NA non-coding upstream 242729 16250440 ~ 16250973 (+)
G153321 NA non-coding upstream 510880 15982592 ~ 15982822 (+)
G153320 NA non-coding upstream 512356 15981122 ~ 15981346 (+)
G153434 NA non-coding downstream 2341 16501754 ~ 16502104 (+)
LOC122327176 NA non-coding downstream 23217 16522630 ~ 16526808 (+)
LOC122328065 NA non-coding downstream 35606 16535019 ~ 16545350 (+)
G153501 NA non-coding downstream 55520 16554933 ~ 16556610 (+)
G153504 NA non-coding downstream 66639 16566052 ~ 16566670 (+)
rpl32 rpl32,LOC107691188,LOC107719943,LOC107720357 other upstream 107526 16317387 ~ 16386176 (+)
LOC122327131 NA other upstream 322073 16163383 ~ 16171629 (+)
LOC122327825 LOC107565915,LOC107680281,LOC107709523,LOC107680280,LOC107565908,LOC107706842 other upstream 414807 16077581 ~ 16078895 (+)
G153322 LOC107565915,LOC107680281,LOC107709523,LOC107565908,LOC107680280,LOC107706842,LOC107576284 other upstream 458087 16004564 ~ 16035615 (+)
dennd1b dennd1b,LOC107712206,LOC107586420,LOC107664901,LOC107741568,LOC107556170 other upstream 781616 15623093 ~ 15712086 (+)
dock3 dock3,LOC107592830,LOC107691882,LOC107567192 other downstream 101217 16600630 ~ 16749928 (+)
tsc22d2 tsc22d2,LOC107732673,LOC107679060,LOC107701225,LOC107568259,LOC107720398,LOC107551385 other downstream 899892 17399305 ~ 17419244 (+)
G153741 LOC107661227 other downstream 1426938 17926351 ~ 17927244 (+)

Expression


Co-expression Network