Fish Transcriptome and Expression Database

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ornamental fish

G153740

Basic Information

Item	Value
gene id	G153740
gene name	NA
gene type	non-coding
species	tiger barb (Puntius tetrazona)
category of species	ornamental fish

Chromosome Information

Item	Value
chromosome id	NC_056720.1
NCBI id	CM032089.1
chromosome length	18002998
location	17886646 ~ 17886876 (+)
genome version	ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU227592
GGACTTTCCACACTAGTAGCGAGACATGGCAATGATGGGCAGTTGTGAAGACAGTGATTTCGGCAGAACTGAGACCAGTGTGTGAGTTCCCCATTGAACCAAGAAAAACTTGGGTCATGAGTGGAAAGCCATGGGTATCCGAGGATGATTTCATACTTGGGTGAGTCAATTACATACAGAGAAATGAGTTCTTGATGAAACAATCCAGTTTGTAGACGGATGGGCGATGTC

Function

GO: NA

KEGG: NA

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TU227592	True	231	lncRNA	0.45	1	17886646	17886876

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
LOC122327646	ephb3,LOC107668659,LOC107687281,LOC107732650,LOC107744192	coding	upstream	145629	17696875 ~ 17741017 (+)
hykk.2	hykk,hykk.2,LOC107732649,LOC107744196,LOC107551378	coding	upstream	366220	17509728 ~ 17520426 (+)
LOC122328058	hykk,hykk.2,LOC107732649,LOC107744196,LOC107551378	coding	upstream	366220	17516130 ~ 17520426 (+)
dynlt2b	tctex1d2,LOC107701222,LOC107732663,LOC107744197,LOC107551376,LOC107565470	coding	upstream	393991	17490744 ~ 17492655 (+)
rubcn	LOC107720396,LOC107732676,LOC107701215,LOC107568258,LOC107679062,LOC107551360	coding	upstream	447732	17422118 ~ 17438914 (+)
G153737	NA	non-coding	upstream	2725	17883613 ~ 17883921 (+)
G153654	LOC103364560,LOC102213549,LOC105896408	non-coding	upstream	412046	17473241 ~ 17474600 (+)
G153653	NA	non-coding	upstream	413800	17471900 ~ 17472846 (+)
G153647	LOC107568254	non-coding	upstream	444467	17441873 ~ 17442179 (+)
G153645	NA	non-coding	upstream	466702	17419724 ~ 17419944 (+)
G153743	NA	non-coding	downstream	53005	17939881 ~ 17940860 (+)
tsc22d2	tsc22d2,LOC107732673,LOC107679060,LOC107701225,LOC107568259,LOC107720398,LOC107551385	other	upstream	467402	17399305 ~ 17419244 (+)
dock3	dock3,LOC107592830,LOC107691882,LOC107567192	other	upstream	1136718	16600630 ~ 16749928 (+)
G153432	slc6a6b,LOC107567309,LOC107676359,LOC107719944,LOC107562730	other	upstream	1387233	16493702 ~ 16499413 (+)
rpl32	rpl32,LOC107691188,LOC107719943,LOC107720357	other	upstream	1500470	16317387 ~ 16386176 (+)
LOC122327131	NA	other	upstream	1715017	16163383 ~ 16171629 (+)
G153741	LOC107661227	other	downstream	39475	17926351 ~ 17927244 (+)

Expression

Co-expression Network