slx9 (LOC107687875,LOC107754253,LOC107739358,LOC107586963)


Basic Information

Item Value
gene id slx9
gene name LOC107687875,LOC107754253,LOC107739358,LOC107586963
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 6758285 ~ 6774697 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222221.1
TTCACTCGGACAACATTAGCCGTAACACCAAACAAATTGTCAACTTTAACACGTGCGGGACTTTTACCGAGCGTTTGCGCCGTGTGCGACCGTAAGGATCTCAGCAAGACCGTTTAAGACACGCGTGCCTAGCCAGGATGGTGGGTAAAATTAAACGGGTCCGACAGAAGCTCCATCACAGCGCCGTGAGGCTAGAAAATGAGCTCCAAAACAAACCCGGTCTGGAGAAGATACTGATCCGGCCGATTCAGCTCATTAAAACAGAGTCACAAGAGACGAAACTCCACGCACCTGACAGCAGTGTAAACAATAATGCAAAGGCGGTCAGCTTTCCCTCTGGCATTTTTGCTGGAACCAAAATCTCCCCCGAGTCTTTAGTTCAAACGCTGAAAGTTGATGAACCATCAAATGTGGCCATAAGCAAACAGCCTGCAGGAGAACAAAAAGgaacaggagaaaagaaacaacagtcgaagaaagaaaaaatgaaggAGCGCAGGGAAAGATGGCTTAACAAGATCAGTGCGATCAAGCTGGCTCGTGAGCAGCAGGTGGCGCAGGCTCGGCGGAAGGCCACGCCCGTGGTGGGCGACATGAGACCCCTGGCCGACGCCCTTCCTGAACTCTCCCAGCTCCTCCCGTCTCTCAAAACCTCCGCCAGCGCACAGCTGAGGAACAAAGCTTCGGTTAAGAAGAAACCAGAACCCACGAACTACTACTTGATGAAACCAGGCCAGAAACGAAAAATACTCGAGATGGAAACGTCTCACTTCAGCGAGGCCGCGAAGAATCCCGCCTTCAAGACCAACCCTTTATCTGCCATCAGCGATCTCCTGAGAAAGCGGCTCAAGCGGGAAGACGAGCAGAGCTAATCGCCCCCTTGACAGACTTCAAGAACTGCGTTTATCATCCCACGAAACAAACTGCGAAATGCAGTAGGCCCCGGTTTCACGCTTcgtaacaaaatatgaaaatgaagaGGAATCCGGACATTTGCGTCCCTTGCTTAATCCGACACGCATAAACACTACGGTTCATggtgttttctctgtgaatgagTACGAGTTTGGGTTTTTAATCGTGCCACAGATGTTTCCGCGCCGTCTGTTccacaatgaaaataaatcccGTGGAAAATGA

Function

NR:

description
PREDICTED: protein FAM207A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222221.1 True 1140 mRNA 0.50 6 6758285 6774697

Neighbor

gene id symbol gene type direction distance location
adarb1a LOC107687876,LOC107586961,LOC107600973,LOC107754241,LOC107653596,LOC107739329 coding downstream 2493 6729782 ~ 6755792 (-)
zranb3 zranb3,LOC107687885,LOC107663643,LOC107710929 coding downstream 179858 6524786 ~ 6578427 (-)
tmem163b tmem163b,tmem163,LOC107739337,LOC107586956,LOC107663488,LOC107745987,LOC107653588,LOC105909211,LOC103367750,LOC107381042 coding downstream 256977 6473781 ~ 6501308 (-)
pth2rb LOC107739359,LOC107587008,LOC107663669,LOC107653586,LOC107746000,LOC107593036 coding downstream 344171 6394583 ~ 6414114 (-)
ptpn4b ptpn4b,LOC107586954,LOC107653584,LOC107593078 coding downstream 383192 6347651 ~ 6375093 (-)
plcd4a plcd4a,LOC107739328,LOC107600964,LOC107687884,LOC107586990,LOC103363317 coding upstream 625 6775322 ~ 6789529 (-)
cnot9 rqcd1,cnot9,LOC107586962,LOC107687874,LOC107600965,LOC107653560 coding upstream 16977 6791674 ~ 6797085 (-)
LOC122328175 LOC107751494,LOC107739353 coding upstream 99762 6874459 ~ 6880468 (-)
LOC122327117 LOC107570603,LOC107690762 coding upstream 152267 6926964 ~ 6929270 (-)
LOC122328177 NA coding upstream 154453 6929150 ~ 6934573 (-)
G150456 NA non-coding downstream 148657 6607789 ~ 6609628 (-)
G150442 NA non-coding downstream 151731 6603055 ~ 6606554 (-)
G150453 NA non-coding downstream 158752 6597904 ~ 6599533 (-)
G150325 NA non-coding downstream 371518 6384156 ~ 6386767 (-)
G150322 NA non-coding downstream 376313 6377687 ~ 6381972 (-)
G150472 NA non-coding upstream 24466 6799163 ~ 6805440 (-)
G150488 NA non-coding upstream 111852 6886549 ~ 6887136 (-)
G150490 LOC107739322,LOC107653601,LOC107586968,LOC107687868,LOC107751479 non-coding upstream 124546 6899243 ~ 6902815 (-)
G150494 NA non-coding upstream 164921 6939618 ~ 6940626 (-)
G150503 NA non-coding upstream 228263 7002960 ~ 7004118 (-)
cep70 cep70,LOC107739332,LOC107576760,LOC107653595,LOC107754238,LOC107576761,LOC107687877,LOC107587009,LOC107600947,LOC107682686 other downstream 29595 6714794 ~ 6728690 (-)
G150440 r3hdm1,LOC107739334 other downstream 98933 6515565 ~ 6659352 (-)
gcga gcga,LOC107755995,LOC107663711,LOC107593098,LOC107704412,LOC107586984 other downstream 472705 6282456 ~ 6285580 (-)
G150276 npb,LOC107587005,LOC107663585,LOC107756033,LOC107704419,LOC107593099 other downstream 521420 6236252 ~ 6236865 (-)
use1 use1,LOC107756022,LOC107745970,LOC107593088 other downstream 765527 5989497 ~ 5992758 (-)
glsa glsa,LOC107754246,LOC107600978,LOC107739327,LOC107653599,LOC107586966,LOC107687871 other upstream 47506 6822203 ~ 6939000 (-)
nab1a nab1a,LOC107687893,LOC107653562,LOC107739354,LOC107754250,LOC107600950 other upstream 72193 6846890 ~ 6889657 (-)
mfsd6a mfsd6a,LOC107687869,LOC107739325,LOC107600976,LOC107653600,LOC107754251,LOC105022531 other upstream 90526 6865223 ~ 6873200 (-)
G150492 ahr1b,LOC107653601,LOC107600975,LOC107751479,LOC107687868,LOC107586968,LOC107739322 other upstream 131303 6906000 ~ 6913558 (-)
LOC122327113 ahr1b,LOC107586968,LOC107687868,LOC107751479,LOC107653601,LOC107739322,LOC107600975,LOC108410580 other upstream 246057 7020754 ~ 7055562 (-)

Expression


Co-expression Network