dnaja3b (dnaja3b,LOC107716437,LOC107659308,LOC107655350,LOC107715716,LOC554962,LOC107569120)


Basic Information

Item Value
gene id dnaja3b
gene name dnaja3b,LOC107716437,LOC107659308,LOC107655350,LOC107715716,LOC554962,LOC107569120
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 12536097 ~ 12542684 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222265.1
TCCACAGAGCGACGTAAAACATGGCAGCCTCCAGTGCTCGCTGCACTGCACGCTGGCTGTCAAGCGGTTTACCTGGACTCCGCAGCACCTGTGCCCTCATAAAGACCTCCAGACACGGAGGTGCCACAGCTCTGAGGATATGCTGGGTTCGCGGTTACGTGAAGGAGGGTCGTTTAAGCTGCTGGAGGCACATAGGAGCTGTGACATTGAACAGGGTGCCGGtgTTGGGAAGCCAGGGTGTTTTTGGCTCTCGTTTGTTCCACACTACTTCTGGGTGCCTTCAGAAGGACTTCTATGATGTTTTGGGGGTTCCCCGGACTGCCTCTCAGAAAGACATTAAGAAAGCCTACTACCAGTTGGCAAAGAAATATCATCCAGACACCAACCCAGATGACCCTgaagcaaaagaaaagtttgcCAAGCTGGCAGAAGCCTACGAGACCCTCAGTGACGAGCTGAAGAGGAAGCAGTACGACACGTACGGTTCTGCCGGGCCGGGTGCGAGCGGGGCGGAGCAGTACTGGAGGGGCGGGGCCAACGTGGACCCAGAAGAGCTGTTCAGGAAGATCTTTGGAGAGTTCGCTGGGGGGCGTGGCTTCGGCGACCTCAACTCCATGTTCGAACAGGCACCTGAATTTGTGATGGAGCTGACGTTCATGCAGGCTGCTAAAGGCGTGAATAAAGAGATAACGGTCAACATAGACGATACCTGTCCGCGCTGCGACGGAAAAGGTCACGAGCCGGGAACCAAAGTCTCACACTGTCACTACTGTAATGGAACTGGGATGGAGTCTATAAACACCGGCCCGTTTGTGATGCGCTCCGCGTGTAGGCGGTGCGGTGGGCGGGGCTCTATCATCATCACTCCTTGCGTCATGTGCAGAGGGTCTGGACAGACCAAACAGAAACAGAGCGTCATGGTCCCCGTTCCTGCAGGAATAGACGACAGACAGACAATTAAGGTGCCAGTCGGgaagaaatacatttacatcaCATTCAGGGTCCAGAGGAGTCCTGTGTTTCGTCGTGACGGCGCTGATATCCACTCTGATGTGATGATTTCGGTAGCACAGGCGATACTAGGAGGAACAGCCAGAGCACAGGGCCTTTACAGCACCATCGACATTGCGATTCCTCCAGGCATTCAGACAGACCACAAGATCATACTGTCAAGTAAAGGCATCCCACGCGTGAATAGCTTCGGTTATGGAGatcattatgtatatatcaaaatcaaaattcCTAAGAAACTGACAAACAGGCAGAGAATGCTGCTCTTAAGTTATGCAGAGGACGAGGTGGATGTGGAAGGAACTGTCACTGGAGTAACCAGACCAGCCAAACGTAAATCTACGAAGAAAGACAACATTAAAAAGAAGGtcaaagaggaggagaagagtgAAAGGAGTAGAAGAAAGAAGTGCGCTCCACACCATCTCCAGTCTGCTTCTACAGATTAACTGCTGAGACATCTCGGCATTAAACTAATGTTGATCCTTTAAAATCATGGATTAAAAGCAAAGTTAAATTCTTTGCCAATTCTCAGTCTGAGGATGACATGTCTAACCTGTGCTGTTTGGTAGACTATAAATGTTTCGATGGGGAAagtgaataaattgtaaaaagaaatctgttttgtaatgtattacATTTCTGTTTGTTAATATCAACACAAAAGgctatgttttattgttatcataTTCAAGGCTAATAAGCACTGCTAGCAACGCTTCAGCTGTGACtacatgataaataaaatgtgtagggcttgaatgcatttattttactgtctttttaaCTGTCTGATATATTAATTGAAgcgatttaaaatatatataatgtgtgta
>XM_043222266.1
TCCACAGAGCGACGTAAAACATGGCAGCCTCCAGTGCTCGCTGCACTGCACGCTGGCTGTCAAGCGGTTTACCTGGACTCCGCAGCACCTGTGCCCTCATAAAGACCTCCAGACACGGAGGTGCCACAGCTCTGAGGATATGCTGGGTTCGCGGTTACGTGAAGGAGGGTCGTTTAAGCTGCTGGAGGCACATAGGAGCTGTGACATTGAACAGGGTGCCGGtgTTGGGAAGCCAGGGTGTTTTTGGCTCTCGTTTGTTCCACACTACTTCTGGGTGCCTTCAGAAGGACTTCTATGATGTTTTGGGGGTTCCCCGGACTGCCTCTCAGAAAGACATTAAGAAAGCCTACTACCAGTTGGCAAAGAAATATCATCCAGACACCAACCCAGATGACCCTgaagcaaaagaaaagtttgcCAAGCTGGCAGAAGCCTACGAGACCCTCAGTGACGAGCTGAAGAGGAAGCAGTACGACACGTACGGTTCTGCCGGGCCGGGTGCGAGCGGGGCGGAGCAGTACTGGAGGGGCGGGGCCAACGTGGACCCAGAAGAGCTGTTCAGGAAGATCTTTGGAGAGTTCGCTGGGGGGCGTGGCTTCGGCGACCTCAACTCCATGTTCGAACAGGCACCTGAATTTGTGATGGAGCTGACGTTCATGCAGGCTGCTAAAGGCGTGAATAAAGAGATAACGGTCAACATAGACGATACCTGTCCGCGCTGCGACGGAAAAGGTCACGAGCCGGGAACCAAAGTCTCACACTGTCACTACTGTAATGGAACTGGGATGGAGTCTATAAACACCGGCCCGTTTGTGATGCGCTCCGCGTGTAGGCGGTGCGGTGGGCGGGGCTCTATCATCATCACTCCTTGCGTCATGTGCAGAGGGTCTGGACAGACCAAACAGAAACAGAGCGTCATGGTCCCCGTTCCTGCAGGAATAGACGACAGACAGACAATTAAGGTGCCAGTCGGgaagaaatacatttacatcaCATTCAGGGTCCAGAGGAGTCCTGTGTTTCGTCGTGACGGCGCTGATATCCACTCTGATGTGATGATTTCGGTAGCACAGGCGATACTAGGAGGAACAGCCAGAGCACAGGGCCTTTACAGCACCATCGACATTGCGATTCCTCCAGGCATTCAGACAGACCACAAGATCATACTGTCAAGTAAAGGCATCCCACGCGTGAATAGCTTCGGTTATGGAGatcattatgtatatatcaaaatcaaaattcCTAAGAAACTGACAAACAGGCAGAGAATGCTGCTCTTAAGTTATGCAGAGGACGAGGTGGATGTGGAAGGAACTGTCACTGGAGTAACCAGACCAGCCAAACGTAGTTCTCAGGCCGGACGGACCTCAGaatcagagcagagcagagaggAAGAGCCAGAGAAAGAGGAAGGAGGATTTTTCTCCAAACTGAAGAAGATGTTCACCTGAAGATCACAGAAGACAGCGGTCTTGTGATGTTTTAGTGTAGAGTTGGtcaaagaggaggagaagagtgAAAGGAGTAGAAGAAAGAAGTGCGCTCCACACCATCTCCAGTCTGCTTCTACAGATTAACTGCTGAGACATCTCGGCATTAAACTAATGTTGATCCTTTAAAATCATGGATTAAAAGCAAAGTTAAATTCTTTGCCAATTCTCAGTCTGAGGATGACATGTCTAACCTGTGCTGTTTGGTAGACTATAAATGTTTCGATGGGGAAagtgaataaattgtaaaaagaaatctgttttgtaatgtattacATTTCTGTTTGTTAATATCAACACAAAAGgctatgttttattgttatcataTTCAAGGCTAATAAGCACTGCTAGCAACGCTTCAGCTGTGACtacatgataaataaaatgtgtagggcttgaatgcatttattttactgtctttttaaCTGTCTGATATATTAATTGAAgcgatttaaaatatatataatgtgtgta

Function

symbol description
dnaja3b Predicted to enable several functions, including ATP binding activity; heat shock protein binding activity; and unfolded protein binding activity. Predicted to be involved in mitochondrion organization and regulation of apoptotic process. Predicted to act upstream of or within protein folding and response to heat. Predicted to be active in mitochondrion. Orthologous to human DNAJA3 (DnaJ heat shock protein family (Hsp40) member A3).

NR:

description
PREDICTED: dnaJ homolog subfamily A member 3, mitochondrial-like isoform X1

GO:

id name namespace
GO:0006457 protein folding biological_process
GO:0009408 response to heat biological_process
GO:0005524 ATP binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0031072 heat shock protein binding molecular_function
GO:0051082 unfolded protein binding molecular_function

KEGG:

id description
K09504 DNAJA3; DnaJ homolog subfamily A member 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222265.1 False 1847 mRNA 0.47 11 12536097 12542684
XM_043222266.1 True 1964 mRNA 0.48 12 12536097 12542684

Neighbor

gene id symbol gene type direction distance location
vasna vasna,LOC107565178,LOC107716440,LOC107659336,LOC107569128,LOC107655389,LOC107715741 coding upstream 32120 12485205 ~ 12503977 (+)
LOC122328225 LOC107716435,LOC107659297,LOC107569129,LOC107715742 coding upstream 57162 12473253 ~ 12478935 (+)
LOC122327840 NA coding upstream 64762 12469118 ~ 12471335 (+)
LOC122327055 LOC107569129,LOC107655331,LOC107715742,LOC107659297,LOC107716435 coding upstream 111395 12421681 ~ 12424702 (+)
LOC122327054 LOC107715704 coding upstream 114440 12414582 ~ 12421657 (+)
LOC122327087 LOC107659305,LOC107722666,LOC107755331,LOC107655385,LOC107569131,LOC101886628 coding downstream 102497 12645181 ~ 12650074 (+)
mrps28 LOC107659331 coding downstream 115380 12658064 ~ 12658715 (+)
LOC122327869 LOC107755343,LOC107655376 coding downstream 146240 12688924 ~ 12699036 (+)
LOC122327868 capn8,LOC107755343,LOC107566058,LOC107655376,LOC107655329,LOC107571859 coding downstream 170611 12713295 ~ 12722332 (+)
capn2l capn2l,LOC107722669,LOC107755345,LOC107659324,LOC107655374,LOC107565171 coding downstream 180178 12722862 ~ 12732856 (+)
G152068 NA non-coding upstream 109125 12426756 ~ 12426972 (+)
G152028 NA non-coding upstream 204252 12306554 ~ 12331845 (+)
G151983 NA non-coding upstream 282811 12252841 ~ 12253286 (+)
G152016 LOC107733205,LOC107563524,LOC107655402,LOC107715731 non-coding upstream 296653 12239108 ~ 12239444 (+)
G152015 LOC107570371,LOC107664873 non-coding upstream 319251 12216447 ~ 12216846 (+)
G152095 NA non-coding downstream 36598 12579282 ~ 12617819 (+)
G152092 NA non-coding downstream 38155 12580839 ~ 12620676 (+)
G152101 NA non-coding downstream 47229 12589913 ~ 12629300 (+)
G152083 NA non-coding downstream 61404 12604088 ~ 12655074 (+)
G152115 NA non-coding downstream 99373 12642057 ~ 12642495 (+)
G152065 LOC107716432,LOC107655331,LOC107575070,LOC107715704,LOC107570368,LOC107755334,LOC107659303 other upstream 112175 12409306 ~ 12423922 (+)
G152043 LOC107741571 other upstream 190347 12345206 ~ 12345750 (+)
G152032 NA other upstream 241380 12293400 ~ 12294717 (+)
LOC122327127 vtg6,LOC107563524,LOC107664867,LOC107715697,LOC107664873,LOC107741562,LOC107570371,LOC107734844,LOC107570369,LOC107664832,LOC107564925,LOC107563523,LOC107715728,LOC107655401,LOC107715731,LOC107655402,LOC107576112,LOC107570370,LOC107734958,LOC107579406 other upstream 259489 12010469 ~ 12276608 (+)
LOC122327156 NA other downstream 524730 13067414 ~ 13098756 (+)
LOC122327162 NA other downstream 564822 13107506 ~ 13112733 (+)
LOC122327212 NA other downstream 633743 13176427 ~ 13180275 (+)
G152558 col8a1b,LOC107717673,LOC107720377,LOC107704548,LOC107667898,LOC107602679,LOC107571642 other downstream 840469 13383153 ~ 13383777 (+)
baiap2l2b baiap2l2b,LOC107717666,LOC107704557,LOC107602661,LOC107559544,LOC107720338 other downstream 862158 13404842 ~ 13509252 (+)

Expression


Co-expression Network