G14301


Basic Information

Item Value
gene id G14301
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 2151126 ~ 2151456 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU16007
ATTACATCCACCACAATGGTTTGGGATTTGGCGTGTTCCAACCTAAACAACCGTTCTGACTCTCTGCACACATAGTTCAGGTCACCGAGTCGCTCGCACAGTTCTATATCTCACTGTACGCCCTCTGTCACGTTGTGGCCTCGTGATGCTCTTGACCCTCTTTGGTTTGACCACAGGAAGTGAAACAGCCCCTTGACACCACCCTGACCCATCCAACTATTCATATTCTTTCTGCTTCCCATAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16007 True 245 lncRNA 0.42 2 2151126 2151456

Neighbor

gene id symbol gene type direction distance location
CI01000001_02141590_02142836 COPZ1, COPZ1.L, COPZ1-B coding downstream 8140 2141560 ~ 2142986 (-)
CI01000001_02126257_02127537 NA coding downstream 23559 2125065 ~ 2127567 (-)
CI01000001_02057429_02071506 LIMA1A coding downstream 79620 2056814 ~ 2071506 (-)
CI01000001_01999489_02002753 IGFBP6B, IGFBP6 coding downstream 148198 1998128 ~ 2002928 (-)
CI01000001_01976950_01992032 GPR182, PIP4K2CA, PIP4K2C coding downstream 157565 1976716 ~ 1993561 (-)
CI01000001_02159372_02162554 HNRNPA1, ROA1 coding upstream 7703 2159159 ~ 2162554 (-)
CI01000001_02173311_02179118 NA coding upstream 21314 2172770 ~ 2180987 (-)
CI01000001_02236985_02242725 HOXC1A coding upstream 85126 2236582 ~ 2243993 (-)
CI01000001_02258523_02262621 NA coding upstream 106986 2258442 ~ 2263103 (-)
CI01000001_02274875_02276207 HOXC4, HOXC4A coding upstream 122836 2274292 ~ 2276769 (-)
G14300 NA non-coding downstream 2189 2148714 ~ 2148937 (-)
G14297 NA non-coding downstream 7761 2143141 ~ 2143365 (-)
G14293 NA non-coding downstream 32560 2118355 ~ 2118566 (-)
G14198 NA non-coding downstream 47657 2102589 ~ 2103469 (-)
G14216 NA non-coding downstream 48625 2102156 ~ 2102501 (-)
G14304 NA non-coding upstream 2926 2154382 ~ 2154883 (-)
G14335 NA non-coding upstream 216402 2367858 ~ 2368107 (-)
G14194 NA non-coding upstream 246699 2398155 ~ 2398918 (-)
G14344 NA non-coding upstream 251721 2403177 ~ 2403748 (-)
G14214 NA non-coding upstream 318739 2470195 ~ 2473589 (-)
G14228 NA other downstream 94648 2055974 ~ 2056478 (-)
G14219 NA other downstream 156228 1994210 ~ 1994898 (-)
G14104 NA other downstream 383668 1763669 ~ 1771468 (-)
CI01000001_00362143_00378213 NA other downstream 1753993 361614 ~ 378213 (-)
CI01000001_00238241_00249437 NA other downstream 1893609 238241 ~ 249437 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 2240858 4392314 ~ 4399804 (-)
CI01000001_04468566_04523431 DNMT3BB.1 other upstream 2324828 4468209 ~ 4523431 (-)
CI01000001_04726550_04727511 PDPFB, PPDPFB, PPDPF other upstream 2417626 4725927 ~ 4728210 (-)
G15736 NA other upstream 2649445 4800901 ~ 4801395 (-)

Expression


Co-expression Network