LOC122327103


Basic Information

Item Value
gene id LOC122327103
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 12125493 ~ 12130315 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222280.1
ACGCCTGTAAACCCGAGAGCGTTACTTCAAAGCAGCTCTCACATTTTCACCCACTTTAAGAGCGGTAAGCGTACtgtttacatcattttaaagccattgctttttttttacctgcgtttgtattaaaaaatgcattgaatctTGTTTGTTATAGATTTCCATTTGTGAAAATCATTGTGTTTGCTTGAATAATATCTAGTGGACTTAAGCTTTTACAGGAATACGGCTTATAATTCTTCTCATAAGCAATTAATAAATAGCTGTATTCATATACAGTATGCACGACCACACAGGAACCCGTCTAGATGTCTCCGGCAGACTTCAAGAGCTTTAACCAACACCACGAAGAGCGAGGAAGCTTCACGCGTCCTCATTTAAAGACACCAGGTGTTGTTTTCAATGAAGTTGGATCTATCATCTAAATTagtctttttcttcttgtttagACTATTTTGCTCTGAGGGGTGGTTGTTACTGAAGAGCCACTCTGTGCTTAACTTAGGCATGGATCGACTGTGCGGTATAATCCTTATTCTTTTACTCACAGAAGAAGCCCTTCAGGAGGAACAAATGAACGTCCGTCTGGAACCAAAGCACATTAAAGTTTGCGAAAGAGCTTCGGTGACAATCAACTGCACTTTTGAGTCGGATGAATATGTGAAAAAAGTGAGCTGGCACTACAGCCAGACATCTGTTTTAAACTGTGGATCAGCTAACAAGATACCTGAAGATAAGCGTTTTATAAGAGAGAAAAGTAAAGACTGGTCAGCACTCAACATTACTTTTATCAGAACCAATGACAGCGGATGGTACTTCTGCAAGATTACACAAGATATCCCAGTTCTCATACAACGCTGCAGTAATCCGACACAAGTTATAGTCGatACCCCCAGCCCCAGCCCCATCCCCAGCCCCAGcaccagaaccagaaccagaaccagaaccacAGAACCTCAGAATCAGACACTGAACCTGACTACAGATTTACCTACAACTTGCGGGACCAATGGTAAACCCAATGCTACAGAAATGTCAACACAATCCAGCTTTCCTGAGTGGTGCATATGGCTAGCGCCGGCCATCGGATGTGTAGTTCTTCTGCTGTCAATTGTTGTCATATTCCTCTTGACTCGCAAACCTAAAGAGATCATATACGAGAACACCAAACCAGCCGAATCGAGCTGCTGGAGGAGAAACCGGGCCAAGATGGACATCTGCGACCTGCCTGCGtccaaaaaaactgaaaccatTAAACCGCTAAGGAAGTATGACACTCTTTCAAGCAACAGAATCAGAAGGCCATAAGTCCTCCATATGAAAGAACCGTCCTTCGAAAACACATgcctcgctgtacacacatatttaatttagtaacGTAGCATTTCCCGATATACGGGAAATTGTAAATACAAACccgttttttttctacagaaaGAGATACATGAGAAAAcctgatttttttcccccttaatGGCTTCTAGCTGTATCATACCGAAACGTTCTGTGGTTACCAATAAATGCGAATAaccaccaaaaaacaaaaatctgtcaCACTTTTTCCAACTCTCTTAATAATACATTGTCCTTACTAATTAATGCAGGGCTAATTGGTCTATGGCGGCCATTTCATGATTAGATAACAAACCGCGTGATGTGACAGTGGTGAATGAGGGAATCAAATGAGGAATCGAGGCGTTTCACAGCTATGAATCATGAATTCTTTTGTAGTCGTTAAAGGAACTGAGCATTTTCGCGCTTTAACACAGTCCCGCGCCCGCCGTTCACGTCAGTTATTGACTTTAATCGGGTCAGACGCCATTTTGACTTTAACGCGGAGGACGCAGTGGCACGTTAATAACTTCCAAACACTGCTCTGCGGTGATTTTGTCTACTGGAAGTTTGGAGCAAAGCTGTTAAAAGCACAATCTCGTTTCATTTCTGTCGAAATACCGGGAAACGCGACTTTCTGGTAGTTGTGAAAACAAGACAGCAATACTTTACCTCCGATCTCGAATGCGAGGGCACTTTCAAAGTGTGGACTCTGCAATTCCATGACAAAGAAAGACGCGTTTTGAGAAacaataaaactgtttaaacgTGTAACCTATTTTTATTCAAACGCGAATCAGCGTTCGTGCTGAGAGAGCAATAAAACCCCGCCCACGtgctcttctgattggctgtaatTTATAACTGATTTTGgttgtggttgttttttttcgttgttgttattgttgttatttttaaggaaatgtatACTTTTCCTCAGCAATTGTGacgatgataataatatttaatggtaaaaatgtttgttgacCACTGAATTAGCATATTATGATTTCTGCAAAAATCGTGATAATGGCGTGATGGTGCTGAGAAATCACTGCTTTTATTGTATCTTTGATCGAATAAAAAtaagccttggtgag
>XM_043222281.1
CACGCCTGTAAACCCGAGAGCGTTACTTCAAAGCAGCTCTCACATTTTCACCCACTTTAAGAGCGGTAAGCGTACtgtttacatcattttaaagccattgctttttttttacctgcgtttgtattaaaaaatgcattgaatctTGTTTGTTATAGATTTCCATTTGTGAAAATCATTGTGTTTGCTTGAATAATATCTAGTGGACTTAAGCTTTTACAGGAATACGGCTTATAATTCTTCTCATAAGCAATTAATAAATAGCTGTATTCATATACAGTATGCACGACCACACAGGAACCCGTCTAGATGTCTCCGGCAGACTTCAAGAGCTTTAACCAACACCACGAAGAGCGAGGAAGCTTCACGCGTCCTCATTTAAAGACACCAGGTGTTGTTTTCAATGAAGTTGGATCTATCATCTAAATTagtctttttcttcttgtttagACTATTTTGCTCTGAGGGGTGGTTGTTACTGAAGAGCCACTCTGTGCTTAACTTAGGCATGGATCGACTGTGCGGTATAATCCTTATTCTTTTACTCACAGAAGAAGCCCTTCAGGAGGAACAAATGAACGTCCGTCTGGAACCAAAGCACATTAAAGTTTGCGAAAGAGCTTCGGTGACAATCAACTGCACTTTTGAGTCGGATGAATATGTGAAAAAAGTGAGCTGGCACTACAGCCAGACATCTGTTTTAAACTGTGGATCAGCTAACAAGATACCTGAAGATAAGCGTTTTATAAGAGAGAAAAGTAAAGACTGGTCAGCACTCAACATTACTTTTATCAGAACCAATGACAGCGGATGGTACTTCTGCAAGATTACACAAGATATCCCAGTTCTCATACAACGCTGCAGTAATCCGACACAAGTTATAGTCGatACCCCCAGCCCCAGCCCCATCCCCAGCCCCAGcaccagaaccagaaccagaaccagaaccacAGAACCTCAGAATCAGACACTGAACCTGACTACAGATTTACCTACAACTTGCGGGACCAATGCTACAGAAATGTCAACACAATCCAGCTTTCCTGAGTGGTGCATATGGCTAGCGCCGGCCATCGGATGTGTAGTTCTTCTGCTGTCAATTGTTGTCATATTCCTCTTGACTCGCAAACCTAAAGAGATCATATACGAGAACACCAAACCAGCCGAATCGAGCTGCTGGAGGAGAAACCGGGCCAAGATGGACATCTGCGACCTGCCTGCGtccaaaaaaactgaaaccatTAAACCGCTAAGGAAGTATGACACTCTTTCAAGCAACAGAATCAGAAGGCCATAAGTCCTCCATATGAAAGAACCGTCCTTCGAAAACACATgcctcgctgtacacacatatttaatttagtaacGTAGCATTTCCCGATATACGGGAAATTGTAAATACAAACccgttttttttctacagaaaGAGATACATGAGAAAAcctgatttttttcccccttaatGGCTTCTAGCTGTATCATACCGAAACGTTCTGTGGTTACCAATAAATGCGAATAaccaccaaaaaacaaaaatctgtcaCACTTTTTCCAACTCTCTTAATAATACATTGTCCTTACTAATTAATGCAGGGCTAATTGGTCTATGGCGGCCATTTCATGATTAGATAACAAACCGCGTGATGTGACAGTGGTGAATGAGGGAATCAAATGAGGAATCGAGGCGTTTCACAGCTATGAATCATGAATTCTTTTGTAGTCGTTAAAGGAACTGAGCATTTTCGCGCTTTAACACAGTCCCGCGCCCGCCGTTCACGTCAGTTATTGACTTTAATCGGGTCAGACGCCATTTTGACTTTAACGCGGAGGACGCAGTGGCACGTTAATAACTTCCAAACACTGCTCTGCGGTGATTTTGTCTACTGGAAGTTTGGAGCAAAGCTGTTAAAAGCACAATCTCGTTTCATTTCTGTCGAAATACCGGGAAACGCGACTTTCTGGTAGTTGTGAAAACAAGACAGCAATACTTTACCTCCGATCTCGAATGCGAGGGCACTTTCAAAGTGTGGACTCTGCAATTCCATGACAAAGAAAGACGCGTTTTGAGAAacaataaaactgtttaaacgTGTAACCTATTTTTATTCAAACGCGAATCAGCGTTCGTGCTGAGAGAGCAATAAAACCCCGCCCACGtgctcttctgattggctgtaatTTATAACTGATTTTGgttgtggttgttttttttcgttgttgttattgttgttatttttaaggaaatgtatACTTTTCCTCAGCAATTGTGacgatgataataatatttaatggtaaaaatgtttgttgacCACTGAATTAGCATATTATGATTTCTGCAAAAATCGTGATAATGGCGTGATGGTGCTGAGAAATCACTGCTTTTATTGTATCTTTGATCGAATAAAAAtaagccttggtgag
>XM_043222282.1
GTGCCGCTGACCTGCTTTCACGCCTGTAAACCCGAGAGCGTTACTTCAAAGCAGCTCTCACATTTTCACCCACTTTAAGAGCGACTATTTTGCTCTGAGGGGTGGTTGTTACTGAAGAGCCACTCTGTGCTTAACTTAGGCATGGATCGACTGTGCGGTATAATCCTTATTCTTTTACTCACAGAAGAAGCCCTTCAGGAGGAACAAATGAACGTCCGTCTGGAACCAAAGCACATTAAAGTTTGCGAAAGAGCTTCGGTGACAATCAACTGCACTTTTGAGTCGGATGAATATGTGAAAAAAGTGAGCTGGCACTACAGCCAGACATCTGTTTTAAACTGTGGATCAGCTAACAAGATACCTGAAGATAAGCGTTTTATAAGAGAGAAAAGTAAAGACTGGTCAGCACTCAACATTACTTTTATCAGAACCAATGACAGCGGATGGTACTTCTGCAAGATTACACAAGATATCCCAGTTCTCATACAACGCTGCAGTAATCCGACACAAGTTATAGTCGatACCCCCAGCCCCAGCCCCATCCCCAGCCCCAGcaccagaaccagaaccagaaccagaaccacAGAACCTCAGAATCAGACACTGAACCTGACTACAGATTTACCTACAACTTGCGGGACCAATGGTAAACCCAATGCTACAGAAATGTCAACACAATCCAGCTTTCCTGAGTGGTGCATATGGCTAGCGCCGGCCATCGGATGTGTAGTTCTTCTGCTGTCAATTGTTGTCATATTCCTCTTGACTCGCAAACCTAAAGAGATCATATACGAGAACACCAAACCAGCCGAATCGAGCTGCTGGAGGAGAAACCGGGCCAAGATGGACATCTGCGACCTGCCTGCGtccaaaaaaactgaaaccatTAAACCGCTAAGGAAGTATGACACTCTTTCAAGCAACAGAATCAGAAGGCCATAAGTCCTCCATATGAAAGAACCGTCCTTCGAAAACACATgcctcgctgtacacacatatttaatttagtaacGTAGCATTTCCCGATATACGGGAAATTGTAAATACAAACccgttttttttctacagaaaGAGATACATGAGAAAAcctgatttttttcccccttaatGGCTTCTAGCTGTATCATACCGAAACGTTCTGTGGTTACCAATAAATGCGAATAaccaccaaaaaacaaaaatctgtcaCACTTTTTCCAACTCTCTTAATAATACATTGTCCTTACTAATTAATGCAGGGCTAATTGGTCTATGGCGGCCATTTCATGATTAGATAACAAACCGCGTGATGTGACAGTGGTGAATGAGGGAATCAAATGAGGAATCGAGGCGTTTCACAGCTATGAATCATGAATTCTTTTGTAGTCGTTAAAGGAACTGAGCATTTTCGCGCTTTAACACAGTCCCGCGCCCGCCGTTCACGTCAGTTATTGACTTTAATCGGGTCAGACGCCATTTTGACTTTAACGCGGAGGACGCAGTGGCACGTTAATAACTTCCAAACACTGCTCTGCGGTGATTTTGTCTACTGGAAGTTTGGAGCAAAGCTGTTAAAAGCACAATCTCGTTTCATTTCTGTCGAAATACCGGGAAACGCGACTTTCTGGTAGTTGTGAAAACAAGACAGCAATACTTTACCTCCGATCTCGAATGCGAGGGCACTTTCAAAGTGTGGACTCTGCAATTCCATGACAAAGAAAGACGCGTTTTGAGAAacaataaaactgtttaaacgTGTAACCTATTTTTATTCAAACGCGAATCAGCGTTCGTGCTGAGAGAGCAATAAAACCCCGCCCACGtgctcttctgattggctgtaatTTATAACTGATTTTGgttgtggttgttttttttcgttgttgttattgttgttatttttaaggaaatgtatACTTTTCCTCAGCAATTGTGacgatgataataatatttaatggtaaaaatgtttgttgacCACTGAATTAGCATATTATGATTTCTGCAAAAATCGTGATAATGGCGTGATGGTGCTGAGAAATCACTGCTTTTATTGTATCTTTGATCGAATAAAAAtaagccttggtgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222280.1 True 2429 mRNA 0.41 5 12125512 12130315
XM_043222281.1 False 2418 mRNA 0.41 5 12125511 12130315
XM_043222282.1 False 2066 mRNA 0.42 6 12125493 12130315

Neighbor

gene id symbol gene type direction distance location
p3h2 p3h2,LOC107664742,LOC107564922,LOC107715694 coding upstream 2496 12087165 ~ 12122997 (+)
LOC122327174 LOC107741537,LOC107564920,LOC107655355,LOC107715710 coding upstream 40932 12082421 ~ 12084561 (+)
ccdc50a ccdc50,si:ch73-6k16.1,LOC107560694 coding upstream 47622 12056820 ~ 12077871 (+)
uchl5 uchl5,LOC107664699,LOC107655412 coding upstream 98741 12022117 ~ 12026752 (+)
glrx2 glrx2,LOC107664942,LOC107560687 coding upstream 103857 12019242 ~ 12021636 (+)
wdr47b wdr47b,wdr47,LOC107741541,LOC107664763,LOC107655405,LOC107715726,LOC107560691,LOC107564929 coding downstream 1653 12131968 ~ 12144436 (+)
clcc1 LOC107664769,LOC107741532,LOC107564923,LOC107655407 coding downstream 16045 12146360 ~ 12152024 (+)
mcoln2 mcoln2,LOC107741530,LOC107715711,LOC107655403,LOC107664794,LOC107563519,LOC107577489 coding downstream 24207 12154522 ~ 12164257 (+)
lpar3 lpar3,LOC107564924,LOC107664802,LOC107655404,LOC107563520,LOC107715712 coding downstream 34067 12164382 ~ 12173298 (+)
dzank1 dzank1,LOC107563543,LOC107715701 coding downstream 234020 12364335 ~ 12373157 (+)
G151999 NA non-coding upstream 77228 12045852 ~ 12048265 (+)
G151976 NA non-coding upstream 118911 12006268 ~ 12006582 (+)
G151972 NA non-coding upstream 132693 11992590 ~ 11992800 (+)
G151936 NA non-coding upstream 257952 11867082 ~ 11867541 (+)
LOC122327899 NA non-coding upstream 338782 11777483 ~ 11786711 (+)
G152015 LOC107570371,LOC107664873 non-coding downstream 86132 12216447 ~ 12216846 (+)
G152016 LOC107733205,LOC107563524,LOC107655402,LOC107715731 non-coding downstream 108793 12239108 ~ 12239444 (+)
G151983 NA non-coding downstream 122526 12252841 ~ 12253286 (+)
G152028 NA non-coding downstream 176239 12306554 ~ 12331845 (+)
G152068 NA non-coding downstream 296441 12426756 ~ 12426972 (+)
LOC122327134 senp7,si:dkey-100n23.3,LOC107748206,LOC107600307,LOC107655520,LOC107571594,LOC107717676,LOC107704544,LOC107566043,LOC107704674 other upstream 290359 11826565 ~ 11835134 (+)
LOC122327289 capn8,LOC107565180,LOC107755343,LOC107722658,LOC107655376,LOC107655329,LOC107566058,LOC107571859 other upstream 300286 11822934 ~ 11825207 (+)
mier2 LOC107729715,LOC107593358,LOC107676949,LOC107699399,LOC107719562,LOC107586401 other upstream 797263 11318107 ~ 11328230 (+)
peak3 LOC107676959,LOC107729697,LOC107593354,LOC107655164,LOC107586433,LOC107719638,LOC107593339 other upstream 1130549 10935035 ~ 10994944 (+)
si:dkey-172o19.2 LOC107729689,LOC107676945,LOC107596881,LOC107719578 other upstream 1203462 10918089 ~ 10922031 (+)
LOC122327107 LOC107563522,LOC107715696,LOC108430069,LOC108271041,LOC105898241 other downstream 45372 12175687 ~ 12189006 (+)
G152032 NA other downstream 163085 12293400 ~ 12294717 (+)
G152043 LOC107741571 other downstream 214891 12345206 ~ 12345750 (+)
G152065 LOC107716432,LOC107655331,LOC107575070,LOC107715704,LOC107570368,LOC107755334,LOC107659303 other downstream 278991 12409306 ~ 12423922 (+)
LOC122327156 NA other downstream 937099 13067414 ~ 13098756 (+)

Expression


Co-expression Network