LOC122327115 (LOC107687869,LOC107739325,LOC107653600,LOC107600976,LOC107754251)


Basic Information

Item Value
gene id LOC122327115
gene name LOC107687869,LOC107739325,LOC107653600,LOC107600976,LOC107754251
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 6986565 ~ 6994634 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222297.1
AcgaaattaatattcatgaggtaAGCCCAAAGTCGGTTGGTGAGCAGGTGAACGCTGGATCCTTGccacaaagcaacaaaaatgccTTGACGAGGCATCAAACAAGGGAGAAAGCATCAGTTTGTACTGGCAGAAAAGCCAGGAGACAAAACACGGTCCGGTGTTCATTGGAAATGGAAGGAAATCAACTTCTTCATCGAAACGCGTCTGTTTCAAAGTAACCGACTCACCTGAAACTACCGAGACCACAGaAATATCAAGCACTCCAGCTAAAAGATGGCTGATGACCGTGTAGCCATCTTAACCGATGACGAAGAGGACCTAAAGAGGAGACACCTCGAGCGCTTCGACCGTCTGTCGCTTGAGATTCAATCAAACCAACCTTCGCAGTCATCCGTGGACAGTGTACCTAACGATTTGGCACCGGCTCCAACGCCTCAGCGTGACATGAGCTGCTGCGAACGTTTGCTCCTACGGGTCAACCCCTACCTTCTTGTgtcaaaagtgttttatttgttcttctATGCTGCATATGGTTCCCTCCATCCCCTTCTTGCGTTGTACTACAAGCAGCTGGGGATGAATGCCACCCAAAGTGGTCTCCTAGTGGGAATCCGTTATTTCATTGAGTTCTGTAGCGCCCCTTTTTGGGGCATTGTCGCAGATCGTTTCAGGAAAGGTAAAGCAGTCCTATTGTTCTCAATGTTATGCTGGCTCCTTTTCAATTCTGGGATTGGATTTGTGCAACCAGCAGATATGACATGTAACGAAGACAGCCCCCCGACGACCACAGCCATGATACCGACTGTCCATGTTACCACATCCAACGAGACCTTCTACCTCAACTCCAGTTCCATCTTAACAAACCAGATGAGACGCCGCAGAGATCTGATTGGACACTACCCTCGGCGAATCATACTATCCTCCATTTGGTCTTCAGGCTATAGCTCTGAACACCGATTCAAACGGGATTCAAACTTGAGTTTCACCGTGGCACCTGATGAGTTAGCTAACACAACGCAATCTGAGCAAAACACCACCGGGCACGAGCTAAGCACATCCACGCCTAATGCCACATCGGGCACCACTACTCAAAGTATTACaaccaaaccaaaccagacACCTGAATATAACATGGACCAGGTTCACGCCATTTTCCTGCTGATTTTGCTCGTCATTATCATTGGCGAGTTTTTCAGTGCTCCAGCTATTACTATCGTGGATACAGTGACACTGCAGTACCTGGGTGCACATCGTGACCGCTACGGTCTCCAGCGAATGTGGGGATCTCTAGGATGGGGTATCGCCATGCTCTGCGTCGGCATCTGGATCGATCACACTAACACTGATCTTGTCATTGGCAACACGGAATGCTCCATGGAAAATTACAAGAACTACCATATTGCCTTCATTGTGTTCGGCGTATTAATGGGAATCGCTTTGATTGTTGCTACTCAGTTTAAGTTTGATGTTCAGCACCAAAACAGGAGCGAAGGAACTGAGTTTGGCAACCAGCAGCAAAACACCCCTCCTGGAAGTTCCCCTGGAACAGAGAGCGCAGAGGCTCCAACAATTGTCCAAGTCGAGGAGTTCCACTTCTGGGATTTGATGCGACTGCTGTGCGGTGTACAGTACAGCACCGTGTTGTTCGTGGCATGGTTCATGGGCTTCGGCTATGGGTTTGTTTTCACTTTCCTTTACTGGCATTTACAGGACCTGACAGGAACCACAACGCTGTTTGGTGTTTGTTCTGTTCTGAGTCACGTGTCGGAGCTTGCTGCCTATTTCACCAGCCATAAGTTCATTGAACTGGTAGGACACATCAGAGTTTTGTACATCGGTCTGGCCTGCAACACCGCACGCTACCTCTATATCTCGTATCTCAAGAACGCCTGGACCGTGCTGCCAATGGAAGTGCTGCAAGGCATAACGCATGCGTCTGTATGGGCGGCGTGTATCTCATATTTGAGCGCTGCCGTACCTCCACCTCTTCGGACGTCCGCTCAAGGCATCCTGCAGGGTCTCCACCTCGGGCTGGGCAGGGGCTGTGGGCGATGGTCGGCGGGGTTTGTCAACTACTTTGGCGTTGCCGAAACATTCAGGGGAATAGGAATGACGTCGCTTGTTATTTTGCTGATCTTTTCATTAATAATGTGCATCACTGGCCAGAATGAGAAAAAAGAGGACAAGATGCTAGCAGAGAACATTCCTATCCCATCCAGTCCTGTTCCCATAGCGACTATTGACCTGGTTCAGAGCACAACGGACGCAACTGCACCTGCTCGACCCGAACCCAAACTTCCTGCTCGGAAAACACGGCAccaggaggagcaggaggatctGAACAAGCCCGCCTGGGTTCCCTCTGGGTCGCCGCTGGTTACAGTCGTTCTGCTGTTCTACCAAATCAAAGACATGGTCATCATTGCAAAGACCCCTGTGGAGGTCCAACCCCTTCAGGACACAGATGAGATTCCCCCAGAATCTCGAGAAGGAGACCAATCACCTCCCATCGTTGGCAATGGCGTGCGACAGGACGGCAGTCTCGGTGGGCTCCGGTCCCAGGAGGACCCCGGGCCCCCAGGGGCTGCCTCACAACTGGAATTCCCGACACGGGACACACGGCCTGTATTACAAGCAAACGGCTGATTCGGCAACCCATGGGTATTTTTCTCTCCACATGGTGACTTTGTTTTTCGTTGTGAAGCGTTTTTATGGGGAAAATACAAGGAAGAAGGACGAGCTTCATCGTATAAGTGACCTTTAACTTATTTCCAGGTGTTTTGCACGTGCTATAAATAAAGCCTGGCCGGTTTTAAACTGTA

Function

NR:

description
PREDICTED: major facilitator superfamily domain-containing protein 6-A-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222297.1 True 2825 mRNA 0.50 9 6986565 6994634

Neighbor

gene id symbol gene type direction distance location
LOC122327116 nab1a,LOC107687893,LOC107653562,LOC107739354,LOC107754250 coding downstream 14605 6962514 ~ 6971960 (-)
LOC122328177 NA coding downstream 51992 6929150 ~ 6934573 (-)
LOC122327117 LOC107570603,LOC107690762 coding downstream 57295 6926964 ~ 6929270 (-)
LOC122328175 LOC107751494,LOC107739353 coding downstream 106097 6874459 ~ 6880468 (-)
cnot9 rqcd1,cnot9,LOC107586962,LOC107687874,LOC107600965,LOC107653560 coding downstream 189480 6791674 ~ 6797085 (-)
LOC122327118 LOC107751494,LOC107739353,LOC107653563,LOC107600951 coding upstream 3274 6997908 ~ 7002547 (-)
ahr2 ahr2,LOC107751478,LOC107687867,LOC107600952 coding upstream 63523 7058157 ~ 7106640 (-)
cntnap5b cntnap5b,LOC107751476,LOC107569969,LOC107653604,LOC107739344,LOC107600954,LOC108411251,LOC105905662 coding upstream 240267 7234901 ~ 7283785 (-)
s100b s100b,LOC107687865,LOC107571703,LOC107600981 coding upstream 392423 7387057 ~ 7389184 (-)
aox5 aox5,LOC107600984,LOC107739315,LOC105905663 coding upstream 500027 7494661 ~ 7514404 (-)
G150494 NA non-coding downstream 45939 6939618 ~ 6940626 (-)
G150490 LOC107739322,LOC107653601,LOC107586968,LOC107687868,LOC107751479 non-coding downstream 83750 6899243 ~ 6902815 (-)
G150488 NA non-coding downstream 99429 6886549 ~ 6887136 (-)
G150472 NA non-coding downstream 181125 6799163 ~ 6805440 (-)
G150456 NA non-coding downstream 376937 6607789 ~ 6609628 (-)
G150503 NA non-coding upstream 8326 7002960 ~ 7004118 (-)
G150538 NA non-coding upstream 10422 7005056 ~ 7005447 (-)
G150542 NA non-coding upstream 27767 7022401 ~ 7022697 (-)
LOC122327846 NA non-coding upstream 176708 7171342 ~ 7174445 (-)
G150564 NA non-coding upstream 201719 7196353 ~ 7196683 (-)
glsa glsa,LOC107754246,LOC107600978,LOC107739327,LOC107653599,LOC107586966,LOC107687871 other downstream 47565 6822203 ~ 6939000 (-)
G150492 ahr1b,LOC107653601,LOC107600975,LOC107751479,LOC107687868,LOC107586968,LOC107739322 other downstream 73007 6906000 ~ 6913558 (-)
nab1a nab1a,LOC107687893,LOC107653562,LOC107739354,LOC107754250,LOC107600950 other downstream 96908 6846890 ~ 6889657 (-)
mfsd6a mfsd6a,LOC107687869,LOC107739325,LOC107600976,LOC107653600,LOC107754251,LOC105022531 other downstream 113365 6865223 ~ 6873200 (-)
cep70 cep70,LOC107739332,LOC107576760,LOC107653595,LOC107754238,LOC107576761,LOC107687877,LOC107587009,LOC107600947,LOC107682686 other downstream 257875 6714794 ~ 6728690 (-)
LOC122327113 ahr1b,LOC107586968,LOC107687868,LOC107751479,LOC107653601,LOC107739322,LOC107600975,LOC108410580 other upstream 26120 7020754 ~ 7055562 (-)
LOC122327776 LOC107751486,LOC107656680,LOC107565498,LOC107653539,LOC107715642,LOC107600957,LOC107751482 other upstream 615222 7609856 ~ 7618398 (-)
tmem264 tmem264,LOC107715063,LOC107757465,LOC107665501,LOC107653574,LOC107588123,LOC107561895 other upstream 1291738 8286372 ~ 8293208 (-)
zbtb37 zbtb37,LOC107588063,LOC107757486,LOC107653628,LOC107669814,LOC107715095,LOC107592718,LOC107592717,LOC107669813,LOC107715094,LOC107757485,LOC107588062,LOC107653629 other upstream 1605716 8600350 ~ 8612744 (-)
G151107 tal1,LOC107669848 other upstream 1889487 8884121 ~ 8886941 (-)

Expression


Co-expression Network