LOC122327117 (LOC107570603,LOC107690762)


Basic Information

Item Value
gene id LOC122327117
gene name LOC107570603,LOC107690762
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 6926964 ~ 6929270 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222300.1
CAGTAGGTGGCGGGAAGGCAAGCTCTACGTTGGTCTGCCGACCGCCATTAAACTCCAGAAGAAGGAGAAAACAGGACGTAGTGGTGCCAGCAAATCACACAGCTTTGTGTTTTTGGgGATTTCGCCTACGTTTCAGCTCTTCCACAGAAGATAATGAAACGGTTTACGAAAGAAAGTCGAAAACATGACTGATCCGGAAACCCGCAGAATAAAACCAGAAGATACTGAGCAACAAATAGaCCTGATAGTAGAGAACAAGGCGATTGAAAAACTGACTGAAGTGGAAGAGAAACATCATCTCAAAACTGAAGAGACGTCTTGGGGTTCCTCATTAAAAAGCACAGACGAAAAGTGTTTCAATTGCCCTCAGTGTGACAAAAGCTTCTCATGCGAGCAAAATCTCGATGTTCATATAAAATGTCACCTTGAAGAGTTTCCAGACGACCTGAAGGACCGCCTGAAAGTTCATGCAAAGGAGAACCCTTGTGTATGCGATTtatgtggaaagagttttagtCTGATGGGTACGTTAAAAAAACACCAGAAAAGACACAGCGGTGTGAAGGATCACGCTTGCTCTGAGTGCGGGAAGACTTTCTTTACAGATGGTGCGTTGAAAGTGCACCTGATTAGTCACTCTACAGAAACGCCttacaagtgttcacactgtggCAAGAGCTTCAAACGGTCGATATATGTGAAAAGACatgagaggatccacaccggagagaaaccgtacaCGTGTGATCACTGTGGGAAGAGTTTCGGACGAAAAGGACATCTTAATAAACACTTGACTATCCACACTGGAGTGAAGCCGCACACATGTGATCAGTGCGGAAGGGGTTTTACAGAGAAAGACCTCCTCAATGTTCACATGAcaatccacaccggagagaagccgtacaaatgtgatcagtgcgggaagagtttcagaATATCAAGCGTTTTTAGGGATCATCTGCTTATTCATTCTAACGAAAGGCTCTATAACTGTGACCGGTGtggtaaagatttttttagGACGAGTGCCCTAAAGAGGCATATGAAAGTTCACACGAAGGAGAAGCCTCACGTGTGTTCCTTGTGCGGAAAGAGTTTTAGTGAGCGGgatgctttaaaaatacaccAGAAAAGACACAGCGGCGTGAAGGATCATATTTGCTGTGAGTGCGGGAAGGCTTTCTTTACTGATGCCGAAGTGAAAAAGCACAAGGAAACTCACGCTACGGAAACCCCTTACAAGTGCTCACAATGCGAGAAGAGGTTCAAACGGTTAGTATATCTGAAAATGcacgagaggatccacaccggagagaagccgtatCGCTGCAACTCGTGTGGCAATAGTTTCACTCAGTTATCTTCTCTAAcctatcataaaaaaaaaagatgcgtGTCTGAAATGACCGTAATTCAAATGTCGATCTGTGCTTCCAGAGCCCCATCAAGCGATTGTTGAGATGAACTGAGAATAAAAGGACTGACTGATTGCC

Function

NR:

description
PREDICTED: zinc finger protein 501-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222300.1 True 1496 mRNA 0.45 3 6926964 6929270

Neighbor

gene id symbol gene type direction distance location
LOC122328175 LOC107751494,LOC107739353 coding downstream 46496 6874459 ~ 6880468 (-)
cnot9 rqcd1,cnot9,LOC107586962,LOC107687874,LOC107600965,LOC107653560 coding downstream 129879 6791674 ~ 6797085 (-)
plcd4a plcd4a,LOC107739328,LOC107600964,LOC107687884,LOC107586990,LOC103363317 coding downstream 137435 6775322 ~ 6789529 (-)
slx9 LOC107687875,LOC107754253,LOC107739358,LOC107586963 coding downstream 152267 6758285 ~ 6774697 (-)
adarb1a LOC107687876,LOC107586961,LOC107600973,LOC107754241,LOC107653596,LOC107739329 coding downstream 171172 6729782 ~ 6755792 (-)
LOC122327116 nab1a,LOC107687893,LOC107653562,LOC107739354,LOC107754250 coding upstream 33244 6962514 ~ 6971960 (-)
LOC122327115 LOC107687869,LOC107739325,LOC107653600,LOC107600976,LOC107754251 coding upstream 57295 6986565 ~ 6994634 (-)
LOC122327118 LOC107751494,LOC107739353,LOC107653563,LOC107600951 coding upstream 68638 6997908 ~ 7002547 (-)
ahr2 ahr2,LOC107751478,LOC107687867,LOC107600952 coding upstream 128887 7058157 ~ 7106640 (-)
cntnap5b cntnap5b,LOC107751476,LOC107569969,LOC107653604,LOC107739344,LOC107600954,LOC108411251,LOC105905662 coding upstream 305631 7234901 ~ 7283785 (-)
G150490 LOC107739322,LOC107653601,LOC107586968,LOC107687868,LOC107751479 non-coding downstream 24149 6899243 ~ 6902815 (-)
G150488 NA non-coding downstream 39828 6886549 ~ 6887136 (-)
G150472 NA non-coding downstream 121524 6799163 ~ 6805440 (-)
G150456 NA non-coding downstream 317336 6607789 ~ 6609628 (-)
G150442 NA non-coding downstream 320410 6603055 ~ 6606554 (-)
G150494 NA non-coding upstream 10348 6939618 ~ 6940626 (-)
G150503 NA non-coding upstream 73690 7002960 ~ 7004118 (-)
G150538 NA non-coding upstream 75786 7005056 ~ 7005447 (-)
G150542 NA non-coding upstream 93131 7022401 ~ 7022697 (-)
LOC122327846 NA non-coding upstream 242072 7171342 ~ 7174445 (-)
G150492 ahr1b,LOC107653601,LOC107600975,LOC107751479,LOC107687868,LOC107586968,LOC107739322 other downstream 13406 6906000 ~ 6913558 (-)
nab1a nab1a,LOC107687893,LOC107653562,LOC107739354,LOC107754250,LOC107600950 other downstream 37307 6846890 ~ 6889657 (-)
mfsd6a mfsd6a,LOC107687869,LOC107739325,LOC107600976,LOC107653600,LOC107754251,LOC105022531 other downstream 53764 6865223 ~ 6873200 (-)
cep70 cep70,LOC107739332,LOC107576760,LOC107653595,LOC107754238,LOC107576761,LOC107687877,LOC107587009,LOC107600947,LOC107682686 other downstream 198274 6714794 ~ 6728690 (-)
G150440 r3hdm1,LOC107739334 other downstream 267612 6515565 ~ 6659352 (-)
LOC122327113 ahr1b,LOC107586968,LOC107687868,LOC107751479,LOC107653601,LOC107739322,LOC107600975,LOC108410580 other upstream 91484 7020754 ~ 7055562 (-)
LOC122327776 LOC107751486,LOC107656680,LOC107565498,LOC107653539,LOC107715642,LOC107600957,LOC107751482 other upstream 680586 7609856 ~ 7618398 (-)
tmem264 tmem264,LOC107715063,LOC107757465,LOC107665501,LOC107653574,LOC107588123,LOC107561895 other upstream 1357102 8286372 ~ 8293208 (-)
zbtb37 zbtb37,LOC107588063,LOC107757486,LOC107653628,LOC107669814,LOC107715095,LOC107592718,LOC107592717,LOC107669813,LOC107715094,LOC107757485,LOC107588062,LOC107653629 other upstream 1671080 8600350 ~ 8612744 (-)
G151107 tal1,LOC107669848 other upstream 1954851 8884121 ~ 8886941 (-)

Expression


Co-expression Network