LOC122327121 (LOC107751463,LOC107571702,LOC107653569,LOC107687862,LOC107739318,LOC107687887,LOC107565490,LOC107600988)


Basic Information

Item Value
gene id LOC122327121
gene name LOC107751463,LOC107571702,LOC107653569,LOC107687862,LOC107739318,LOC107687887,LOC107565490,LOC107600988
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 7517800 ~ 7518955 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222302.1
ATGGACACAAGAGCCTCCCTCTCcattctgctgctgctgtttggcGTCTCACAGGCATCTCCTCTCATCGTAAGATCTGGAGTGTTTGTGTCCGAGCCTGAAACTGTGGACATCACTACAAAGATTTTGGAGACCAACAATGGATCTTCTGAAGTCCTGATTGAAGGAGATCTAGTGTTTCCCAAAACCAGAAATGCTCTCTACTGCTTTAACAACAACTGTTTCTGGAAGAAAAACTCTAACAACATAGTGGAGGTCCCTTACATAGTGAGCAGTGAATACTCCTCTTATGACAAATCAGTGATTACGAACGCCATGTCCACCTTTCACTCCAAAACCTGCATCCGCTTTGTGGCCAGATCAACTCAGACCGACTACATCAGCATTGAGAACAAAGATGGGTGCTACTCTTCTCTTGGCAGAACTGGTGGTAAACAGGTGGTCTCCCTCAACAGACAAGGCTGTGTGTATCACGGCATCGTTCAGCATGAGCTCAATCATGCCCTGGGCTTCTACCATGAACACACCAGGAGCGATCGTGACCAGTACGTCAAGATCAACTTTCAGAACATCTCTCCTGAACAGGCCTACAACTTCCAGAAACAAAACACCAACAACCAGAACACTCCATACGACTACGGCTCCGTCATGCACTATGGAAGAACAGCCTTCTCCATCCAGCCCGGCCTGGAAACCATCACTCCCATTCCTGATGATACGGTGGAAATCGGACAGAGACAGGGACTGTCCAACATCGACATCCTGAGGATCAACAAGCTGTATGCATGCTGA

Function

NR:

description
PREDICTED: high choriolytic enzyme 1-like

GO: NA

KEGG:

id description
K08778 ASTL; astacin-like metalloendopeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222302.1 True 792 mRNA 0.48 5 7517800 7518955

Neighbor

gene id symbol gene type direction distance location
LOC122327800 LOC107751463,LOC107571702,LOC107653569,LOC107687862,LOC107739318,LOC107687887,LOC107565490 coding downstream 1899 7514739 ~ 7515901 (-)
aox5 aox5,LOC107600984,LOC107739315,LOC105905663 coding downstream 3396 7494661 ~ 7514404 (-)
s100b s100b,LOC107687865,LOC107571703,LOC107600981 coding downstream 128616 7387057 ~ 7389184 (-)
cntnap5b cntnap5b,LOC107751476,LOC107569969,LOC107653604,LOC107739344,LOC107600954,LOC108411251,LOC105905662 coding downstream 234015 7234901 ~ 7283785 (-)
ahr2 ahr2,LOC107751478,LOC107687867,LOC107600952 coding downstream 411160 7058157 ~ 7106640 (-)
LOC122327123 LOC107687862,LOC107565490,LOC107751463,LOC107687887,LOC107571702,LOC107739318,LOC107653569,LOC107687863 coding upstream 2763 7521718 ~ 7522892 (-)
LOC122327064 LOC107751463,LOC107571702,LOC107687862,LOC107687887,LOC107739318,LOC107653569,LOC107565490,LOC107600988 coding upstream 5481 7524436 ~ 7525617 (-)
si:ch211-246m6.4 si:ch211-246m6.4,LOC107656681,LOC107751464,LOC107565497,LOC107739350,LOC107600989,LOC107653571,LOC107600970 coding upstream 18682 7537637 ~ 7542060 (-)
si:ch211-246m6.5 si:ch211-246m6.5,LOC107751466,LOC107656682,LOC107600990,LOC107739341,LOC107653538 coding upstream 29395 7548350 ~ 7601080 (-)
LOC122327777 NA coding upstream 100395 7619350 ~ 7622439 (-)
G150628 NA non-coding downstream 19311 7486176 ~ 7498489 (-)
G150626 NA non-coding downstream 32866 7483864 ~ 7484934 (-)
LOC122327668 arl4ca,arl4c,LOC107600967,LOC107739351,LOC105905671,LOC106575223 non-coding downstream 47656 7450248 ~ 7470144 (-)
G150596 NA non-coding downstream 94401 7409413 ~ 7423399 (-)
LOC122327085 NA non-coding downstream 221245 7290672 ~ 7296555 (-)
LOC122327778 NA non-coding upstream 105744 7624699 ~ 7628851 (-)
LOC122328071 NA non-coding upstream 128156 7647111 ~ 7652174 (-)
G150706 NA non-coding upstream 339368 7858323 ~ 7866902 (-)
LOC122327072 NA non-coding upstream 381633 7900588 ~ 7952064 (-)
G150735 NA non-coding upstream 546877 8065832 ~ 8066111 (-)
LOC122327113 ahr1b,LOC107586968,LOC107687868,LOC107751479,LOC107653601,LOC107739322,LOC107600975,LOC108410580 other downstream 462238 7020754 ~ 7055562 (-)
glsa glsa,LOC107754246,LOC107600978,LOC107739327,LOC107653599,LOC107586966,LOC107687871 other downstream 578800 6822203 ~ 6939000 (-)
LOC122327776 LOC107751486,LOC107656680,LOC107565498,LOC107653539,LOC107715642,LOC107600957,LOC107751482 other upstream 90901 7609856 ~ 7618398 (-)
tmem264 tmem264,LOC107715063,LOC107757465,LOC107665501,LOC107653574,LOC107588123,LOC107561895 other upstream 767417 8286372 ~ 8293208 (-)
zbtb37 zbtb37,LOC107588063,LOC107757486,LOC107653628,LOC107669814,LOC107715095,LOC107592718,LOC107592717,LOC107669813,LOC107715094,LOC107757485,LOC107588062,LOC107653629 other upstream 1081395 8600350 ~ 8612744 (-)
G151107 tal1,LOC107669848 other upstream 1365166 8884121 ~ 8886941 (-)
nfia nfia,LOC107592693,LOC107599440,LOC107653654 other upstream 1494593 9013548 ~ 9171931 (-)

Expression


Co-expression Network